Anguilla anguilla (European eel): 118217323
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Entry
118217323 CDS
T07545
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aang01001
]
118217323 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aang04054
]
118217323 (ciita)
Enzymes [BR:
aang01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
118217323 (ciita)
Protein kinases [BR:
aang01001
]
Serine/threonine kinases: Other
TAF1 family
118217323 (ciita)
Pattern recognition receptors [BR:
aang04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118217323 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
AAA_25
AAA_22
ABC_tran
LRR_14
TsaE
DO-GTPase2
AAA_16
AAA_24
Pox_A32
Motif
Other DBs
NCBI-GeneID:
118217323
NCBI-ProteinID:
XP_035255118
LinkDB
All DBs
Position
17:11116422..11141871
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AA seq
1211 aa
AA seq
DB search
MVPFQDILYQVRRCVEESSPEEVQNLLKELMEVQVLSRDYYLSLAQEGDSEDLARRISLP
IWQNWDMCHGPIQLLLHRLPPCSPCANGSEMQEMALDLQEHLGETLHDEDLIGYFPRDLL
DIPGGCFSPFPHDDSLDIDISNILQTLFEGQEGYSSDAATVPTSPAKSEPVQQETNNENS
SNGKRGLPAYMASGDPKKAKRRRRAENRSSKGRDKTRRPQKNGDCENNVSPEKGVVTAAP
PGIVRFGPCTVPQFLQVPVFVPAPGGPSFQVIQTFAPIPQQMVKIPVASTMGLGGPTYVL
VPSPTVTPSPQVMPQSPVAGAVVPPDLVSTPLSSSSDRANKAWSVASVSSLSPVTEEPSC
KGLKSPTTHVPPEPDTPKCVAEYMERAKSLMRDTCENATADPGVPFKSLYVDVGPVKRQV
QANVGRNAKRCLEKELVVLGDGDRRRATLERGRVFEEEAGQRRTGASIALLGKSGAGKTT
FIRRLCLDWAEGDLPRFDFLFLLEGRALNVPQSGFSLRNLLFDISANPKLSRDSDTGIDV
DVVFRHVLARPQRVLIMFDGFDDFRDCDGLLQSPATSASRDDYSAKQLFSGLFQKKILAG
CTLLVAARPKEVLNQCLGKVDRILELPGFSPTEVEFYASRYLAGSPCRDQALKRLREGGY
ALRLCANPLLCQSVCYLLDRQGGKKALPSTLTGLCEAVTHHQLFAIGREQEGVESRRATV
LKLCHAAWEGMKSHNSQLPLDSELSPAEQCELEAAGGILTRYAQWHGKEEPAGHGYGFGH
MLTQSFLAALYLALSRDVSSRALVAQMGVQPRKRKLPADWLDITHRLAMALLFQKRALFR
DCFAEAKGGARGRDVAAKRAAVTAHLKRLSVCEPSPSRLLELCHCIFETGDVKLAKCLSK
SLPCQLSFSGAQLDPPDVFVLHQLLVLSANRSFSLNLEETGINVSGLRELLGLKCVSSFR
ASIGDVISLWEDLQKTNAEGLLRNTISKFTINPFKATRLSHIDDLTLLIQIYREKKLPFC
DSNQSEPTLDNDSFSIPAVRNLRRLDFELGAQNGPAGFSKLVKILPDLQWLQHLDLEDNK
IGDAGAEMLAEVLPALLSLEMLNLSQNCIGDGGVAKLAQALSSLPALVCLSLYSNLIGDG
GAENLATVLPQMKSLTDLDVKYNKFSDSGAMMLSESMRSCPWMKTIGMWNHFIPHGVLER
LKQQDSRIRTL
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggttcccttccaggacatcctataccaggtgaggaggtgcgtggaggagtcatcccca
gaagaggtgcagaacctcctgaaggagctgatggaagtgcaggtcctgtccagggattac
tacctgtcgctagcccaggagggtgattctgaggacctggcgcgtaggatatctctgccc
atttggcagaactgggacatgtgccatggtcccatccagctgctgctccacaggctgcca
ccatgcagtccatgtgccaacgggtcagaaatgcaagaaatggctttggaccttcaggaa
catctgggcgagactttacatgacgaggacctgattggttattttcctcgagatcttctg
gatatccctggtggatgcttctccccctttccccacgatgattctttggacatcgacata
tcaaacatattacagactctgtttgaaggtcaagaaggatattccagtgatgcggctact
gtaccaacttcaccagccaagtcggagccagttcaacaggaaacaaacaatgaaaattcc
agtaatggaaagagaggcctgcctgcctacatggcatctggagatccaaagaaagcaaag
cgcagaaggagagcagaaaataggtcatcaaagggcagagacaagacgcgcaggccccaa
aagaacggcgactgcgaaaataatgtttcaccagagaagggggttgtgaccgcagctccc
ccagggatagtccgattcgggccctgcactgtcccacaatttctgcaggtcccagtcttt
gtgccagctcctggtggtccatctttccaggtgattcagacctttgcacctatccctcag
cagatggtcaagatccctgtggccagcaccatgggccttggaggtcccacctatgtgctg
gtgccatcgccgacagtcacacccagcccccaggtcatgccccaatctcccgtggccggg
gcggtggttccccctgatctcgtctccacgcctctgagttcctcttcagaccgtgcaaac
aaagcctggtctgtggcctctgtctcctccctgtctcctgtgacagaggaaccatcatgc
aaaggcttaaagtccccaaccacccatgtgccaccagagcccgacacacccaaatgtgtt
gcggaatacatggaaagggccaaatcgctcatgagggacacgtgcgaaaatgcgactgct
gaccccggtgtgcctttcaagtccctctacgtggatgtgggcccggtcaagcggcaggtg
caggccaacgtggggcggaatgccaaaaggtgcctggagaaggagctggtcgtccttggt
gatggcgatcggagacgggccacgctggagagggggcgggtcttcgaggaggaagcgggg
cagaggcgcaccggggcctcgattgccctgctggggaagagcggggcggggaagacgacc
ttcatccgcaggctgtgcctggactgggccgagggtgacctcccgcggttcgacttcctg
ttcctactggagggacgggccctgaacgtcccgcagagtgggttcagcctgaggaacctc
ctttttgacatttcggccaaccccaagcttagccgagactctgacacgggcatcgacgtg
gacgttgtcttcaggcacgtcctggcccgcccccagagggtcctcatcatgttcgatggc
ttcgacgacttcagggactgtgatgggctcctgcaatccccagccacaagcgcctccagg
gacgactacagcgccaagcagctcttctccggactgttccagaagaagatcctggccggg
tgcacgctgctggtggcagcccggcccaaggaggtcctgaaccagtgcctggggaaggtg
gaccggatcttggagcttccgggcttctcccccacagaggtggagttctatgcttcccgc
tacttggcggggtccccttgccgtgaccaggccctgaaaagactgcgggaaggtggctat
gctctcaggctgtgtgcgaaccccttactctgccagtccgtctgctacctcctggacagg
cagggcggcaagaaagcgctgccgtccacgctcacggggctgtgcgaggcagtgactcac
caccagttgtttgcgattggccgagagcaagagggggtggagtcacggcgggcaacagtt
ttgaagctctgccatgcggcttgggagggaatgaaatcccacaattcccagctgccgctg
gacagtgagctgagccccgcggagcagtgtgagctggaggcagccggcgggattctcacc
cgctacgctcagtggcacggcaaggaggagcccgcagggcatggctacgggttcggccac
atgctcacccagagctttttggccgccctgtacctagccctgtcccgggacgtgagcagc
agggccttggtggcgcagatgggggtccagccgcggaagaggaagcttccggctgactgg
ctggacatcacgcataggctcgccatggccctgctcttccagaagagggcgctctttcgg
gattgcttcgcggaagccaagggcggggcccggggcagagacgtggcggctaagcgggcc
gcggtgacggctcacctgaagcgcctgagcgtgtgcgagccaagcccctccaggctcctg
gaactgtgccactgcattttcgagacgggcgacgtcaaacttgccaagtgcctgagcaag
agcctgccctgccagctctccttcagcggcgcccagctggacccgcctgacgtcttcgtc
ctgcaccagctcctcgtcctcagtgccaataggagcttctccctaaacctggaggagacc
ggcatcaacgtctccggccttagggagctcctggggctcaagtgcgtctcctccttcaga
gcttccataggggatgtgattagcctgtgggaagatctgcagaagacgaatgcagagggt
cttctgagaaacacaatttcaaagttcactatcaaccccttcaaagctacacgcctgtct
cacattgatgacctcactctcctcatccagatctacagagagaaaaaacttcccttctgt
gactccaaccaatcagagcccacgttggacaacgattccttcagcatcccagctgtgagg
aaccttcgaaggctggacttcgagctgggtgcacaaaatggtcccgcgggattctcgaag
ctggttaagatccttccggacctgcagtggctgcagcaccttgacctggaggacaacaag
attggagacgccggggcggagatgttggctgaggtgctgcctgcgctgctatctctggaa
atgctgaacctatcacaaaactgcatcggagatgggggcgtggccaagctggctcaggca
ctctcctccctccctgctctggtttgcctcagcttgtacagcaacctgattggcgatggt
ggagctgaaaacctggctacggtcctgccccagatgaagtcactgacagatctagatgtt
aaatataacaagttcagcgactcaggagccatgatgctgagtgagagtatgaggagctgc
ccgtggatgaagaccataggaatgtggaaccatttcattccccacggtgttcttgagcgt
ctgaaacaacaggactctaggataagaacactctag
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