Anguilla anguilla (European eel): 118218035
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Entry
118218035 CDS
T07545
Symbol
col13a1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118218035 (col13a1)
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118218035 (col13a1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
118218035
NCBI-ProteinID:
XP_035256270
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Position
18:complement(3855738..3956766)
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AA seq
689 aa
AA seq
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MEEEQKWSVSPQSSVGRTCTEHPCKKRFWKNCKDLSGIAVCSALSLLSFGVCVLVYLKTA
ELQSKVFNLEKERDTQLSAWLSLDQVEPILIGRLDQILEEKLAARLPKVREAREAPHSCV
CPPGPPGPPGRAGFPGDKGTMGIPGRMGLKGDAGEKGAPGEPGLSIIGPRGPPGQPGTRG
FPGFPGPIGLDGKPGQSGLKGDLGPRGPKGVPGEPGPKGEKGVCGDYSHRQMLPITVRNM
PPINHLMLKHQLKQGEPGLQGPPGPPGAPGTPGPAGTNGLPGKPGEPGKPGKDPRMLPGM
KGEPGTPGLKGDRGEVGPLGPPGPQGPKGDQGFKGDKGEPSTGGVGIKGEPGLPGPPGPL
GPKGDKGDAGVTGVTGPEGPAGPRGPPGPMGEPGKSETIDYNGNFNDKFLDIHNVPLMGP
PGLPGPPGTPGTKGEVGLPGPPGHDGEKGPRGKPGDTGPAGPPGPEGPRGEGGVTGFPGP
KGDKGDAGPAGSPGLDGPTGEKGVAGPPGPIGLPGSMGQKGEAGEKGGRPDMVHGPPGPP
GPLGPAGPVGSPGLPGPKGEPGIGIKGEKGGLGLKGEKGDRGHLGLPGAHGLDGRPGPVG
LVGPVGVPGPAGPKGERGIKGDTGFPGPIGPQGLPGIEGPHGLKGNRGERGKKGNRGAKG
DKGDQGAPGLDAPCPLGEDGLPVPGCWNK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggaacagaagtggagcgttagtccacagtcgagcgtggggaggacttgcacc
gagcatccttgcaaaaagaggttttggaagaactgcaaagacctgtctgggatagccgtg
tgcagcgcgttatccttgttgtcctttggagtctgcgttttggtttacctgaagactgcg
gaactgcagtctaaggtttttaatctggaaaaggaacgggacacgcaactttcagcgtgg
ctgtcactggaccaggtggaacccatcctcataggtagactcgatcagattttggaagag
aagctggccgcacggttacccaaggttcgagaagctcgagaggccccccacagctgcgtc
tgcccgccaggtcctcctggccctcctggacgagctggctttccgggtgacaaaggaaca
atggggattcctggaagaatggggttaaagggcgacgctggggaaaagggggcgccaggc
gagccaggcctgtctatcattggcccacgaggaccccctggacagcctggaacaagagga
tttcctggattcccgggtccgattggattggacggaaagccgggccaaagtggactgaag
ggagacctgggtccacgaggtccgaaaggagttccaggtgaaccaggccctaagggggaa
aagggtgtttgtggagattattctcacaggcagatgctgcccatcaccgtacgcaacatg
cccccaataaaccatctaatgctaaagcaccagctcaagcagggcgagcccggattgcaa
ggtcctccaggacctccgggggctccagggaccccagggccggccggcactaatggatta
ccgggaaaacctggtgaacctggaaagccaggaaaggacccaaggatgttacctggaatg
aagggtgagccgggcaccccagggctgaagggagatcgtggcgaagttggccccctaggt
cccccaggtcctcagggaccaaagggagatcaggggttcaagggtgacaagggggagccc
agtacaggaggagttggaatcaaaggggaaccgggcctgcccgggcctccaggaccgctg
gggcccaagggtgacaaaggcgatgcaggtgtaacgggggtgacaggaccagaggggcca
gctgggccaagaggtcctcctggtccaatgggcgaaccagggaaatctgaaactatcgac
tacaatggcaatttcaatgacaaattcttggatattcacaacgtgcctctgatgggtccc
cctggactacctgggcctcctgggacacctggtacaaagggtgaagttggattgccaggc
ccccccggtcatgatggtgaaaagggtccccgcggaaagccgggagacacggggccagcg
ggtcctccaggccccgaggggcccagaggggaaggaggcgtcacgggcttccccgggccg
aagggcgacaagggggacgcgggccccgctggatcgcccggattagatggccctactggt
gaaaagggcgtggcgggcccacctggtcccattggattaccaggctcaatgggtcaaaag
ggggaagcaggagagaagggtgggaggccagacatggtccatgggccccctgggcctcca
ggaccactaggaccagctggccccgtgggatctccaggacttccagggccaaagggggag
ccaggtattggcatcaagggggagaaaggaggacttggactgaagggagaaaaaggagat
aggggccatcttgggctgcccggggctcatggtctagacggcaggccgggtccagtgggt
cttgtaggaccggttggggttccagggccagcaggaccaaagggggagaggggtatcaaa
ggtgatacaggatttccaggaccaatcgggccacaaggcctccctggtatagaaggacca
catggactgaaaggaaaccggggggagaggggcaagaaaggcaacaggggggccaagggg
gataagggagaccaaggagcgcctggattagatgcaccctgtccgttgggggaggatggg
ttacctgtacctggctgttggaataaatga
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