Anguilla anguilla (European eel): 118218150
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Entry
118218150 CDS
T07545
Symbol
prkn
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04120
Ubiquitin mediated proteolysis
aang04137
Mitophagy - animal
aang04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118218150 (prkn)
04120 Ubiquitin mediated proteolysis
118218150 (prkn)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118218150 (prkn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aang04131
]
118218150 (prkn)
04121 Ubiquitin system [BR:
aang04121
]
118218150 (prkn)
03029 Mitochondrial biogenesis [BR:
aang03029
]
118218150 (prkn)
Enzymes [BR:
aang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
118218150 (prkn)
Membrane trafficking [BR:
aang04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
118218150 (prkn)
Aggrephagy
Other aggrephagy associated proteins
118218150 (prkn)
Xenophagy
Other xenophagy associated proteins
118218150 (prkn)
Ubiquitin system [BR:
aang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
118218150 (prkn)
Mitochondrial biogenesis [BR:
aang03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
118218150 (prkn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR
ubiquitin
IBR_1
Rad60-SLD
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
118218150
NCBI-ProteinID:
XP_035256470
LinkDB
All DBs
Position
18:6880996..6964325
Genome browser
AA seq
462 aa
AA seq
DB search
MVSVRPTYTHAVFVRFNSSQGYPVELEAGASVAELREAVGRLQGVRPEELRVIFAGRELS
SDCTLQGCDLPEQSTVHVVLPPPAAARGLDVVLQNRLGRGVDSLTRVDLSQSRLPTSSDG
LAAVLETNAETGTQNEPRSQSSFYVFCKTVCRAIQPGKLRVRCRTCKQGTLTLSRGPSCW
DDVLLPDRIHGVCQSSGCDGRMAEFYLKCAAHPTSDSDTSVALDLITANVRGVPCIACTD
VTSPVLVSQCPDRHVICLDCFHTYCLTRLNERQFFHDPDIGYTLPCAAGCANSLIKEVHH
FRALGEEQYERYQQYAAEECVLQMGGVLCPAPGCGAGLLPENGQRRIQCQSSGGLGCGFV
FCRECKDRFHEGACLTRLQPETGAALQGCAMDGEAARRARWEQASRETIDETTRPCPQCR
VPVEKNGGCMHMVCPRSQCRFEWCWLCRVEWNRECMGNHWFG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggtatctgtcaggcccacgtacacgcatgcagtgtttgtcaggtttaacagcagtcag
ggctacccggtggagctggaggcaggggcgagtgtggctgagctgagggaggctgtgggg
aggctgcagggggtccggcctgaggagctgagggtcattttcgccggcagagaactgagc
agcgactgcaccctccaggggtgtgaccttcctgagcagagcacggtgcacgtggttctc
ccgcccccggcggcggcccgtgggctggacgtggtgctgcagaaccggctgggccggggg
gtggacagcctgacccgggtggacctcagccaatcccgactgcccacgagttctgatgga
ctggccgcggtcctggagaccaacgcggaaacgggtacacaaaacgagcccagatcccag
agcagcttctatgtcttctgtaagacggtgtgccgagccatccagccgggaaaactccgg
gtccgctgccgcacctgcaagcaaggaacactgacactcagccggggaccatcttgctgg
gatgatgtcctccttccagacaggatccacggagtgtgtcagtccagtggctgcgatggc
aggatggcggagttctacctgaaatgtgccgcccaccccaccagtgacagcgacacatct
gtggccctggacctcatcaccgccaacgtccggggcgtcccctgcatcgcctgcaccgac
gtcacgagcccggtgttggtgtctcagtgccccgaccgccatgtcatctgtctggactgc
ttccacacgtactgccttaccaggctcaacgagcgacagttcttccatgacccggacatc
ggctacaccctcccctgtgcagccggctgtgccaactccctaattaaagaggtccatcat
ttccgggcccttggagaggagcagtacgagcgctaccagcagtacgcagcagaggagtgc
gtgctgcagatgggcggggtcctgtgccccgcccctggctgtggggcggggctgcttccg
gagaacggccagcgcaggatccagtgtcagagcagcggcgggctgggctgtgggtttgtt
ttttgccgggagtgtaaggatcggttccacgagggggcgtgtctaacgaggttgcaaccg
gagacaggtgcggccctccagggctgtgccatggacggggaggcggcgcggcgggctcgg
tgggagcaggcttccagggagacgatcgatgagaccacccggccgtgcccgcagtgccga
gttcctgtggagaagaacggcggctgcatgcacatggtgtgcccgcgcagtcagtgccgc
ttcgagtggtgctggctgtgccgcgtggagtggaaccgcgagtgcatggggaaccactgg
ttcggctga
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