Anguilla anguilla (European eel): 118218378
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Entry
118218378 CDS
T07545
Symbol
col17a1b
Name
(RefSeq) collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118218378 (col17a1b)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
WBP-1
Motif
Other DBs
NCBI-GeneID:
118218378
NCBI-ProteinID:
XP_035256880
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All DBs
Position
18:29147379..29188873
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AA seq
1572 aa
AA seq
DB search
MDYLSTRNRHLSGGSSALSANVVTESVTTTTRLTSLPPTSGGFSVSSSGGGYGAGSGGGS
GGGYGAGSGGGSGGGSGGGSGGGSRGAVRGTSGSFSMVTKGGSSSSVSGGIRRGPAYSPA
LIERKTIISHSGGYEGSSSGNSSPEYTRKEYVAASSSSRGRSQSRESEIRARLQSASPST
RWTELEDVKKLLKGSRSCSVSPTRPISDTIPIPKKGSVETRIVTDGSQSVAFGASESGHW
RFVSYQTSHSPSVRAGPVSHAPSGAPLLTQYDTTVIDAVQPSYTWTTSSLPSGFAGMTMP
SYSTSPKNLSPGSTLLPPPPLSSLSVSGVQNNMMSGPPPVSSGLSSGSSAYGLQNNLVTT
SNGALTSGGFNSHAGYGVQKNVSVSTAVSTNTASVVRPHLEENFLKDFKFLLLEKENLPV
RKEDDLQIMTKDSGKQFSSAPNRAPRGSFSDDSLKKEKMMPSYAESPLKADTNAYSIHKD
GNYAGGGAGGGGGCCGDSCCSWWKWLLGLLLGLLLLLGLLCGLIALAEEVKRLKGRVEAL
EQASMEAHASRRVAEAGAYTDVSGSSVLGRNLNLGTAANTDTATLQQLVQQLVQAELRSD
TLRDSLAVSLKGERGEQGPKGESGVMGPKGDAGFPGIPGAPGHVGPEGPKGQKGTAGESG
PEGPAGLKGREGPVGPRGDPGPPGFGTKGDKGSSGDPGIPGPLGSPGPVGPKGAPGAHGT
NGRPGEPGAPGFRGDVGQSGPKGERGLTGPPGQKGDPGDKGPRGSSGDPGLPGSPGSPGE
KGSKGNAGSHGSDGEKGARGDQGPIGLPGIRGPPGPQGDIGSPGVPGLQGPPGVAGNPGQ
PGAKGPAGEPGKIINAAGSNSVGIPGPPGSPGPAGPAGPPGLSGPIGPAGLPGQIGPRGD
KGDKGDRGDRGDQGEPGISVTSERISSTRAERQFEAPRDGEPGKPGQPGQPGQPGGPGPP
GPPGPPGPAGLPGSHSYAGEPRTGARGPTGPAGPPGPPGEPGVGLPGPRGERGEPGRYVG
TSETHFSGYPGPAGPPGPPGTPGAPGTPGQKGSQGSQGARGYQGEPGTPGAPGSPGSPGS
PGSSYADTARVVPGPPGSPGPPGPMGPGGPMGPAGPQGSKGDAGVPGAPGIPGSSRGAVS
GTRSVQGPPGPPGPPGPPGREGRGGADFRQYLAEYFQSDTVRQSLIGPQGPPGPPGAPGT
GGYSLDDLASRVIAYIQRSGYVGGAPGPPGPPGASGSVSVNDIIVLLQRDEVRRYVTGPP
GPPGPPGSSGGYATFDTQEMADRVLRLMNERGMLNVQGPPGPPGLPGSYGDITTLLQKPE
FRGLRGQPGPPGAIGPQGPPGAPGAPGPQGPATGVRCPLSDPNNVPSLTENAHQIQIRAE
LQEYLRSDNMRKLIIGPPGAPGAPGFPGQKGDRGEPGYSYTEDTGHRQAHASRRAEHLDY
SNMAVKVTDYIKTQGLLRDVLYDATQRVQTGVIQGPPGPPGPPGPPGQTHYFGSSSNMTQ
LIDYVKMHGSIAGPPGRPGQKGERGYPGHKGDRGEMGPRGFQGATGLPGYNGLKGQKGDR
AVVERTRRSVGV
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atggattatttaagtacaaggaatagacacctttctggtgggagctcagcgctctcagcc
aacgttgtgacagaaagcgtaacaacgacaaccagactaacatcactgcctccaacttcc
ggagggttctctgtcagttcctctggaggagggtatggagcggggtccgggggcgggtcc
gggggcgggtatggagcagggtctgggggcggatccggaggcgggtcaggaggcgggtcc
ggaggaggttccaggggagccgttagagggacctcgggatccttctccatggtaacaaag
ggaggctcctcctcgtccgtgtctgggggtataaggagggggcctgcctattccccggct
ctcatcgagaggaagaccatcatcagccactcaggcgggtatgaaggaagttctagtggg
aattcctcaccggaatacacaaggaaagagtatgttgctgccagctcttcatccagaggg
aggagccagagcagagagagtgaaattcgagccagattgcagagcgcttctccctccacc
agatggactgagctggaagatgtgaagaagctcctgaaaggcagccgctcctgcagcgtg
agccccacccgccccatctccgacaccatccccatccccaagaaggggtccgtggagacc
aggatcgtcaccgatggctcgcagtcagttgccttcggagcctcagagtctggtcactgg
aggtttgtctcttaccagacgagtcacagcccctcagtcagggcggggcctgtgtctcac
gcccccagtggagccccattgctgacgcagtatgacaccacggtgattgacgctgtccag
ccctcctacacgtggaccacctccagcctgccctcagggttcgctggcatgactatgccc
agctactccacgagccccaaaaacctgtcccccggatccaccctcctaccccctccgccc
ctgtcatcgctctcagtttctggcgtccagaacaacatgatgagcggacctcccccggtc
agcagcggcctgtccagcggtagctcagcgtacggtcttcagaataacctggttacaaca
tccaacggtgctctcacctccggtgggtttaactcacatgcaggttatggggtacagaag
aatgtgtcagtcagcactgcagtctccaccaatacagcctctgtggtccggccgcacctt
gaggagaatttcctcaaagacttcaagttcctgctgctggagaaggagaacctgccggtc
cggaaggaggacgacctgcagatcatgaccaaagacagcgggaagcagttcagcagcgcg
ccgaaccgggctcccagggggtcattttcagacgactctctgaagaaggagaaaatgatg
cctagctacgctgaatctccacttaaggccgacacaaacgcatactcgattcataaggat
gggaactacgcagggggcggggccgggggcgggggcggctgctgtggagactcctgctgc
agctggtggaagtggcttctgggactgctcctgggactgctgctcctcctggggctcctg
tgcggactcattgcactggcggaggaggtgaagaggctgaagggccgggtggaggctctg
gagcaggcctccatggaggcgcacgccagccgccgcgtggccgaagccggcgcctacacg
gacgtgtccggctcgtccgttttggggcggaacctgaacctgggcacggcagccaacacg
gacaccgccaccctgcagcagctcgtacagcagctggtccaggccgagctgcggtccgac
acgctccgagactcacttgccgtgtctctcaaaggagaaagaggagaacaaggacccaaa
ggtgaatcaggcgttatgggacccaaaggtgatgctggtttccctggaataccaggtgct
ccaggacacgttggtccagaaggacctaagggacagaagggaactgcaggggaatctgga
ccggagggcccggccgggctgaagggacgagagggcccagtggggccccgtggtgacccc
gggcccccaggattcggcacaaagggagataaaggctccagcggtgacccaggcatccct
gggcccctcggatcccccggtcctgtgggccccaaaggtgcacccggcgctcacggtaca
aacggccgaccaggtgaacccggtgctccaggtttccgcggtgacgtaggccaatctgga
ccgaaaggagagagagggttgactggacctccaggacagaaaggagatcctggtgataaa
ggccctcgcggttcttcaggagacccagggttgcctggaagcccgggatcacctggagag
aaaggttccaaaggaaacgcaggttctcatgggtctgatggagaaaagggcgccagaggt
gaccaaggaccaatcggactgcccggcattcgtggtccacctggacctcagggagatatc
ggctctccaggcgttccaggacttcagggtccaccaggggtagcaggaaatcctggccag
cctggagctaaaggtcccgcaggtgaacctgggaagatcattaatgccgctggctccaac
tctgtgggtattcccggccccccaggcagccctggacccgccggtcccgctggccccccc
ggactgtcaggacccattggccctgctggacttcctggtcagattggtcctaggggggat
aagggcgacaagggcgataggggagacaggggtgaccagggagagcctggcatttccgtg
acatccgaacggatcagctccaccagagccgagagacaatttgaggctcccagagatggt
gaacccggaaaacccggacaaccagggcaaccgggacagccaggaggaccagggccccct
ggaccccccggcccccccgggcctgccggactgccaggctcgcacagctatgcaggagag
cccagaacaggtgcacgtggtcccacgggtcctgcaggacccccaggtcctccaggggag
ccaggtgtgggtttgcctggccccaggggagaaagaggggaacctggaagatacgtgggc
acctccgaaacgcatttctctggataccctggaccggctgggcctcccggacctcctgga
actcctggagctcccggcacacctggacagaaaggatcgcagggtagccaaggagcaagg
ggatatcaaggggaaccaggcaccccgggtgctccaggaagtccagggagtccagggagt
ccaggcagcagctatgcagacacagcacgagtcgttccggggcccccagggtctccggga
ccccccggcccgatgggaccagggggaccgatgggtcccgctgggccgcaaggatctaaa
ggtgatgccggggtaccaggtgctcctggaataccagggtcttcaagaggcgcggtttca
ggcaccagaagcgtacagggaccccctggcccacccgggccccctggacccccagggagg
gaagggcgaggtggcgcagatttccgtcagtacctggcagagtacttccagagtgacaca
gtcaggcagtccctgattggcccccaggggccccccggcccgcccggagccccggggaca
ggcggttactctctggatgatttggcttcccgcgtcattgcttatatccagaggtccggt
tacgtcggtggagctcctggtcccccaggccctcctggtgcctctggctctgtgtctgtc
aatgacatcattgtacttctgcagagggatgaggtgcggcggtatgtgacgggccccccc
ggcccaccaggcccccccggaagcagtggtggctatgccacttttgacacccaggaaatg
gctgatcgcgttctgagacttatgaatgaacgtgggatgctgaacgtacaaggacccccg
gggcctcccggcctgcctggctcctacggtgacattaccaccctgcttcagaaacccgag
ttccgtggattgaggggccaaccaggacccccaggggccattggtccccaggggccacca
ggagcaccgggcgcaccaggaccccagggcccagctactggggttcgctgccccctttcg
gaccccaacaacgtgccgtccttgactgagaacgcccaccaaattcagattcgcgccgag
ctccaggagtacctcagaagtgataacatgcggaagttaatcatcgggcccccaggagcc
ccaggggccccgggcttcccagggcagaagggggatcgtggtgagccaggctacagctac
acggaggacaccggacacagacaggctcacgccagccgacgggcggagcatctggactac
tccaacatggcggtgaaagtgaccgattacatcaagactcagggtctgctgcgggatgtc
ctgtatgatgccactcagcgtgtacaaacaggggtgatccagggtcctcctgggcccccc
ggaccccctggccccccaggacagacccattactttgggtcttccagcaacatgacccaa
ctcatagactacgtgaagatgcacggctccattgcgggacccccagggaggcccgggcag
aaaggagagaggggttatccgggacacaaaggagacagaggtgaaatgggaccacgtggc
tttcagggggcaacaggacttccaggctacaacggactgaagggtcagaaaggtgaccgg
gcggtggttgagaggacgaggaggagtgttggtgtttaa
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