Anguilla anguilla (European eel): 118218710
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Entry
118218710 CDS
T07545
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 6-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03015
mRNA surveillance pathway
aang03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118218710
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118218710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118218710
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
118218710
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Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
118218710
NCBI-ProteinID:
XP_035257222
LinkDB
All DBs
Position
19:7432575..7449045
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AA seq
581 aa
AA seq
DB search
MADGVDHIDIYADVEEEFTQDAEYDVHDLYDEVISPSANNGDAPEDRDYLDALPPAVGRE
GGKGAPPNVVYTYTGKRIALYIGNLTWWTTDEDLTDAIRSVGINDVLEIKFFENRANGQS
KGFALVCVGSEASSRKLLELLSKRELHGLNPVVTPCNKQSLSQFEMQSRKSTQSGQMSGE
GKAGPPGIGPRGGFPLGRGRGRFPGPPGPGGDRFPGPVGPGGPPPHFPGPGMRSSELIPH
RHQDSHLMEMNFNCFQPGRDGSWRPRGGLQGPPRPPPGPPGPPGPPGPPPPGQGLPPPLS
GPPNRGDRPPPPVMFPGQFGQPPMGPIPPGPPPPVPGYGPPPGPPPPQQGPPPPGPFPPR
PPGPIGPPLALAPPPHMPGPPPGAPPPAPHVNPAFFPPPGNSNMPSSDSRGPPPNDPYGR
PPPYERADFGPAGREMEAARTPLSEAEFEEIMNRNRAISSSAISRAVSDASAADYGSAIE
TLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSASRRERSRERDHSRSREKS
RRHKSRSRERHEDYYRERSRERHRDRDRERDRDREREYRHR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggcgtggatcatatcgacatttacgcggatgtagaagaagaatttacacag
gacgcggagtacgacgtccacgacctgtacgatgaggtcatctcgccctccgccaacaac
ggggacgccccggaggaccgggactacctggacgccctccccccggccgtgggcagggag
gggggcaagggggccccgcccaacgtggtctacacctacacgggcaagaggatcgccctg
tacatcggcaacctgacgtggtggacgaccgacgaggatttgacggacgccattcggtcg
gtcggcatcaacgacgtgctggagatcaagtttttcgagaaccgagccaacggccagtct
aaagggttcgccctggtctgcgtgggatcggaggcctcctccaggaagctgctggagctg
ctgtccaagcgggagctccacggcctgaaccccgtcgtcacgccctgcaacaagcagtct
ctcagtcagtttgaaatgcagtccaggaaaagcacgcagtcagggcagatgtctggcgag
ggcaaggccggcccccctggcataggcccccgcgggggcttccccctgggcagggggagg
gggcgtttccccggcccccccggccccggaggtgaccggttcccgggacccgtgggacca
ggagggccccccccacatttcccagggcctgggatgaggtcctcggagctcattccccat
aggcaccaggacagccatctgatggaaatgaatttcaattgcttccagccggggagggat
gggagctggcgacccagaggaggcctgcaaggaccacctcgtcccccgcctggtcccccg
ggccccccaggtccccccgggccccctccgccaggacagggtcttcccccgcccctgtcg
gggcccccgaaccgaggcgaccgccccccgcccccggtgatgttcccgggccagttcggc
cagccgccgatgggccccatcccccccggcccccctccccccgtcccgggctacggcccg
cctccgggcccccccccgccgcagcagggcccgccccctccggggcccttccctccccgg
cccccggggcccatcggcccgcccctcgccctggccccgcccccgcacatgcccggcccg
ccccccggagccccgcccccggcgccccacgtcaaccccgccttcttcccgccgcccggc
aacagcaacatgccgtcgtccgacagccggggcccccctcccaacgacccgtacgggcgc
ccgcccccgtacgagcgggcagacttcggtcccgccggcagggaaatggaggccgctcgc
acccctctgagcgaggccgagttcgaggagatcatgaaccgcaaccgggccatctccagc
agcgccatctccagggcggtgtcggacgccagcgcagcggactacggcagcgccatcgag
accctggtgacggccatctccctgatcaagcagtccaaggtgtctgcggacgaccggtgc
aaggtgctgatcagctcgctgcaggactgcctgcacggcatcgagtccaagtcctacggc
tcggcgtctaggcgggagcggtccagggagagggaccacagccggtcccgggagaagagc
cggcggcacaagtcgcgcagccgcgagcgccacgaggactactaccgcgagcgcagccgc
gagcgccaccgcgaccgcgaccgggagagggaccgcgaccgcgagcgagagtaccgccac
cgctaa
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