Anguilla anguilla (European eel): 118218796
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Entry
118218796 CDS
T07545
Name
(RefSeq) CCR4-NOT transcription complex subunit 4-like
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118218796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aang03000
]
118218796
03019 Messenger RNA biogenesis [BR:
aang03019
]
118218796
04121 Ubiquitin system [BR:
aang04121
]
118218796
Enzymes [BR:
aang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118218796
Transcription factors [BR:
aang03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
118218796
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118218796
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118218796
Ubiquitin system [BR:
aang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118218796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-UDP
DZR_2
zf-CCCH_2
Torus
zf-C3HC4
Med7
Motif
Other DBs
NCBI-GeneID:
118218796
NCBI-ProteinID:
XP_035257372
LinkDB
All DBs
Position
19:complement(15392620..15419551)
Genome browser
AA seq
786 aa
AA seq
DB search
MSRSPEVKDDSMECPLCMEPLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQRIKNEKKQKQNERKQKMTENRKHLASVRVVQRNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKSMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKMNPSLLQTSAGGGEKTKGKSGSSQRANSGGKEAWPSLQGSGKTANGLAPEHRKT
PPLPDGCSDSEHMTPDGPDGELGLGPGAALSPFSSNCDPASPSDKPPESISIGNGENLQQ
ISSRDSPSPPPGLPRPALVVPISVSDLTARSPFEGAAAESQSLFSDNSNFRHPNPIPSGL
PPFPSSPQASSDWPTAPEPQSLFTSDTIPVSSSTDWQAAFGFGSSKQQEDDLGFDPFDIT
RKALADLIEKELSVQDQGPLSPGALHSPLHGLPAKGLPRSGLPPPNAHFPNSGLPPRFSQ
LQHRAVFSSFSFPGQRPRHPWMGLPSRNNLAHLNHAANAASNSNFLDLSLSAQHSTGLGG
IPITENSASVESINVKEWQDGLRALLPNININFGGLPNSSSSSSSSSSSSVNHTGAPGHP
GGVSHSLSWDGTASWMDPAIITGIPASAGNSLESLQDENPPHWLKSLQALTEMDAPGSTA
PPQPPHSASFGGAQIPLHRGGWTPYTAPPPNPAGPFHSPPPGFQTAFRPPAQTPTDLLQT
AAMDRH
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcagccctgaggttaaggacgactccatggagtgcccgctgtgcatggagccc
ctggagatcgacgacgtcaacttcttcccctgcacctgcggctaccagatctgccgcttc
tgctggcaccgcatccgcaccgacgagaacgggctctgccccgcctgccgaaagccttac
ccagaagaccctgcggtgtacaagccgctgtcccaggaggagctgcagaggataaagaac
gagaagaagcagaagcagaacgagcgcaagcagaagatgacggagaacaggaagcacctg
gccagcgtgcgtgtggtgcagaggaacctggtgttcgtggtgggcctgtcccagaggctg
gccgaccccgaggtgctgaagaggccggaatattttgggaagtttgggaaaatccacaaa
gtggtgatcaacaacagcacatcctacgccggttcacagggtcctagtgccagtgcctat
gtcacgtacattcggtccgaagacgcgctcagagctatacagtgcgtcaacaatgtagta
gtggacggaaggacgctcaaggcctctttaggtacaacaaaatactgcagctactttctg
aagagcatgcagtgccccaaaccggactgcatgtacctgcacgagctgggggacgaggcg
gccagcttcactaaggaggagatgcaggcggggaagcaccaggagtatgagcagaagctt
ttacaggagctctacaaaatgaaccccagcttactacagacctcagccgggggaggggag
aagaccaagggcaaatcaggctcttcacaaagggccaacagcggcggcaaagaggcgtgg
ccatcgttacagggctcggggaagacggccaatgggctggccccggagcaccgcaagacg
ccgccgctgccggacggctgctccgactcggagcacatgaccccggacgggcccgacggc
gagctgggcctgggccccggggccgccctctctcccttctcctccaactgcgaccccgcc
agccccagcgacaaaccgccggaatccataagtataggaaacggcgaaaatttacaacag
atcagcagccgggactccccctcgccccccccggggctccccaggcccgccctggtggtc
cccatcagcgtgtcggacctgacggcgcggtccccgttcgagggggcggcggccgagtcc
cagtcgctcttctccgacaacagcaacttccggcaccccaaccccatccccagcggcctg
ccccccttccccagctccccccaggccagctctgattggcccaccgcccccgagccccag
agcctcttcacttcagacaccatccccgtgtcgtcgtccacagactggcaggcggcgttc
gggttcgggtcctccaagcagcaggaggacgacctggggttcgacccgttcgacatcacg
cgcaaggcgctggccgacctgatcgagaaggagctgtcggtgcaggaccagggcccgctg
tcgcccggcgcgctccacagccccctgcacggcctccccgccaagggcctgccccgctcc
ggcctcccgccccccaacgcccacttcccaaactcgggcctgcccccgcgcttctcccag
ctccagcaccgggccgtcttcagctccttcagcttccccggccagcgcccccgccacccc
tggatggggctgccctcccgaaacaacctggcgcacttgaaccacgcggccaacgccgcc
tcaaatagcaatttcttggacttgagtttgtcggcacagcacagtacagggctaggaggg
atacccatcacagaaaacagcgcttctgtagagagtataaatgtgaaagagtggcaggac
ggactgcgggccctcctgcccaacatcaacatcaacttcgggggcctgccaaactcttct
tcctcttcctcctcatcctcgtcatccagcgtcaaccacacgggggcgccgggccacccc
gggggggtctcgcacagtttaagctgggacgggacggccagctggatggaccccgccatt
atcacaggtatcccggcgtccgcggggaacagtctggagtccctccaggacgagaacccg
ccacactggctcaagtcgctgcaggcgctcacagagatggacgctcccggctccacagcc
cccccccagcccccacacagcgcctccttcgggggcgcacagattcccctccacagaggc
ggctggaccccgtacacagcgcccccccccaaccccgccggcccgttccactcccccccg
cccggcttccagaccgccttcagacctccagcccagacccccacagacctgctacagacc
gcagccatggaccgccactag
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