Anguilla anguilla (European eel): 118219279
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Entry
118219279 CDS
T07545
Symbol
pdzrn4
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aang04121
]
118219279 (pdzrn4)
Enzymes [BR:
aang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118219279 (pdzrn4)
Ubiquitin system [BR:
aang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
118219279 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
118219279
NCBI-ProteinID:
XP_035258220
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All DBs
Position
19:8478855..8496544
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AA seq
606 aa
AA seq
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MGCSLCALRKREERYRLLYEIAQVNGKVVSKVTAEEAAEALRGGGDPMAAQVPQRNPASP
GGHGNPRDARLADVCTQTDITFQHIMALAKLRPLTPPLPDLCPFLLSDSCHSLQTVEQEF
YEGTEYLSHTPASGERADEFEYEEVELCRLNSQEKLGLTLCYRTDEEEEDAGIYVSEVGL
DSVAARDGRIREGDRILQINGQDVQNREEAVTALSDEDCRNILLLVARPEIQLEEGWLDD
EQSRFLEELKMEMLEEQRKEEDQRMSSGEQQPKGCEEEEDEEETTTDATTRSSNTQDPVE
PEPGPPSRATEQEGVQRELRLLSEELRSIERECQSIMQARRLRLARDPAPSPAPADKDSS
SAYDTAESCRSTPPPPARRRSPDRSAQSAVSAANLRNLSRTAAPPAPSLSPSRHGDVPAH
ARRYQSSAHLVQQSQLGLPTAGRDPPPPPPPLQRAEWRAQRCPARRPARDRLLRERALKI
REERGGGGGGTTTDDDAASELKLGRYWSREERKQHLLRAREQRRRREFMMRSRLESLRES
PQSGGEGGGGGRKEVSILELSRRKMMRKRRRKILDNWMTIQELMSHGARRPEDTGVHSAF
LSVTTV
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcagcctgtgcgccttgcgcaagagagaggagcgctacagactgctgtatgag
atcgctcaggtgaacgggaaggtcgtctccaaggtgacggcggaggaggcggcggaggcc
ttgcgcggcggcggggaccccatggcggcgcaggtcccgcaacggaaccccgcctccccg
ggcggccatggcaacccgcgggacgcgcggctggcggacgtctgcacgcagaccgacatc
accttccagcacatcatggccctggccaagctccgccccctcacccccccgctgcccgac
ctgtgtcccttcctgctgtctgacagctgtcactcactgcagaccgtggagcaggagttc
tacgagggcacggagtacctctctcacacccccgccagcggagagagggcggacgagttc
gagtacgaggaggtggagctgtgtcggctgaacagccaggagaagctgggcctgacgctg
tgctacaggacggatgaggaggaggaggacgccggcatttacgtcagcgaggtgggcctg
gacagcgtcgccgccagagacggacgcatcagggaaggggatcgaatcttacagatcaac
ggccaggacgtccagaacagggaggaggcggtgaccgcgctgtccgacgaggactgccga
aacatcctgcttctggtggccaggcctgaaatacagctggaggaggggtggctggacgat
gagcagagccgcttcctggaggagctgaagatggagatgttggaagagcagcggaaggag
gaggaccagcgcatgagcagcggagagcagcagcccaaaggctgtgaggaagaggaggat
gaagaggagaccaccacagacgcgaccacccgttcctccaacacccaggacccggtggaa
ccggaaccggggcccccgtcccgcgcgacggagcaggagggcgtgcagcgggagctgcgc
ctcctcagcgaggagctgaggagcatcgagcgcgagtgccagagcatcatgcaggcccgc
cggctccgcctggcccgggaccccgcccccagccccgcccccgccgacaaggacagctcc
agcgcctacgacacggccgagagctgccggagcacgccgccgccgccggcccgccgccgc
tcccccgaccgctctgcccagagcgccgtgagcgccgccaacctgaggaacctgagcagg
accgccgccccgcccgcgccgagcctctccccgagtcgccacggcgacgtcccggcgcac
gcccgccgctaccagagctccgcgcacctggtgcagcagagccagctcggcctgccgacc
gcgggccgagaccccccgccgccgccgccgccgctgcagcgtgccgagtggagggcccag
cgctgcccggcccggcgacccgcccgcgaccgcctgctccgcgagcgcgccctgaagatc
cgcgaggagcgggggggcgggggcgggggcaccaccacggacgacgacgccgccagcgag
ctgaagctgggccgctactggagccgggaggagcgcaagcagcacctcctgcgggcccgg
gagcagcggcgccgcagggagttcatgatgaggagccggctggagagcctgagggagagc
ccgcagagcgggggcgagggggggggcgggggtcggaaggaggtctccatactggagctc
agccgcaggaagatgatgaggaagcgcaggcggaagattctggataactggatgaccatc
caggagctgatgagccacggggcccggagaccagaggacaccggcgtgcacagcgccttc
ctatccgtcaccaccgtatga
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