Anguilla anguilla (European eel): 118219583
Help
Entry
118219583 CDS
T07545
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118219583 (helz)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
118219583 (helz)
3'-5' decay
Other 3'-5' decay factors
118219583 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
AAA_30
UvrD-helicase
ResIII
PAM2
zf_CCCH_4
Mov-10_helical
PhoH
AAA_22
AAA_16
zf-CCCH_4
AAA_7
Motif
Other DBs
NCBI-GeneID:
118219583
NCBI-ProteinID:
XP_035258750
LinkDB
All DBs
Position
2:complement(70550149..70621291)
Genome browser
AA seq
1943 aa
AA seq
DB search
MADRRPEKSCEEASESLARREYEAVVSHCTEALLLLGLQPPGPRAVPLRSRALLYRIAAL
LQLKNYDQADEDCKHVLAEEMAEADGSFQAGLHSMLLDGSLREVSAILSRALFGEPLNGI
VTKDLTRLKMLLSEIEAVSSKMASEYTEDTEEGEACVEGEEDVQDGWQFRPPPRGVTSSE
EYTLCKRFLEQGLCRYGAQCTSAHSQEELTEWQQRYASRLIRLKQQQESKHFTENYMEAL
IEKWMNSLSPEKVLSDYLDGVNVEHSSDLSVTVTSKKSSHSWTFSLLCKPARTLYRIALL
YDAHRPHFAITAVSAGDASAQLLQEVPGGCQEWTGDGAAQNGMDHCLYKVAVGFSTEIFG
TFRQTIVFDFGSEPVLMQRVMVDAASIEDLEHLKQARQQLLMTAKRWDSSCKTIVEFGPN
ETMELERGLLARYQIPLSADQLFTQSVLDKTLTRENYQARLHDLLYIEEIAQYKEVSKFN
IKVNLQLVTSFMLTGISGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNSVLLLPL
QREWSSQPPGVKERVYEGLIEEKTKDYIFLRICKDCCDELCLQPDRELQVELQFQLNRLP
LCEMHYALDRVKDNGILFPDVSLTPTIPWSPNRQWDEQLDPRLNAKQKEAILAITTPLSI
QLPPVLIIGPYGTGKTFTLAQAVKHILKQPDSRVLICTHSNSAADLYIKDYLHPYVEAGN
PHARPLRVYFRNRWVKTVHPLVQQYCLISSTQFTFQMPEREDILKHRVVVVTLSTSQYLC
QLDLEPGLFSHILLDEAAQAMECETIMPFALASRSTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEYPCRILLCENYRSHEAIINYTSELFYDGKLMASGKQPSHKDFYP
LTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEEMRKKWPVAWGKLDEGSIGVVSPYADQ
VFRIRAELRKKRMPEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKEQLVEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWERFISICHENSSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRPQHPQGFSKQQGSPPKGKGQHANQAE
HFPPEGFVQPNPAVLMGQPIRAFTPPLGGTPALGGKSPSPVQRIDPHTGASILYVPAVYG
GNMVMSVPLPLPWPSYQGRFAVDPRIMSHPAAVAYNMNLLQAHSRGSPVPYGVSHPSPLG
VGQQTSPDKELLPEASRNGKMDGGVKPEQSRLQTPERKAPDLKGKQGEPDPGQNRSPESQ
DALGFPGARLHRKDNPGQRPLNFHLAPPNPAMAPHPNSRQFPHQQYPMPRPPFRVPPQQQ
QGGLPPQHLGQMQQLASQSHAQHAQQQPSAQLSPAFPVGNPSFFHAPPHGRALQSPGLEA
MSAEGPAAGMMAEEAGGPLRPLPQQLGHQPHPQPNRINSFAEDHPEAAMGEGLDIQEALS
QQARLSQWNEHNHLLQGGVAFPLPQHLAHLAQPGLRFPPQLLRPNWRMGAGGQDEAGPPF
PRFPGLLREMGPQEQGEQRDPSEMPPPQSRLLQYRQVPQDLPPPSASPSHGPTPQDGGRE
LEMINSPAYQQQQQQQQHPASQMYGPAFPHAPGHSTPPPVKYLLSDGQWAHGGLPPGHML
GQGFPFGVPVLAHRQEQLHLLQLQQQQQQQKSLQQQQQQQQQQPPIPGQESYHPLSPRTM
AASSLQNVEEYEPRGPGRPLYQRRISSSSAQPYPDDSGAPQGVLTQCKDPQDHPHLSYGY
PSAETWPGSSAPVPFQNIPCNGASTLPHRDLLAPSKAMRSSEEHMKAEGVQPPAHAFGSL
QHLGQFPPLMPGKQPAPDPGGGGGGGPGLSKPPTMSYASALRAPPKPRPLPEQVKKNSDP
LSLLQELRIGSSNNTNGYYSYFK
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggaggccagagaagtcatgtgaagaggccagtgaatcgttagccaggcgg
gagtacgaggcggtggtgagccactgcacggaggcgctcctcctgctcggccttcagccc
cccggtccccgcgcagtgcccctccgcagtcgggccctgctgtaccggatcgccgccctt
ctgcagctgaagaactatgatcaagcagatgaagactgtaagcatgtgctggcggaggaa
atggccgaggcagacgggtccttccaggcggggctgcacagcatgctgctggacggcagt
ctgcgggaagtctccgccattctgtccagggcgctgttcggggagccgctgaatgggatc
gtaacgaaggatttgaccagactgaaaatgctgctctctgaaattgaggcagtaagtagc
aagatggcttcggaatacacagaagacaccgaggaaggtgaggcatgtgtggaaggtgag
gaagatgtccaagatggctggcagttccgcccccctccccgaggggtcaccagtagtgaa
gagtacacgttgtgtaagaggttcctggagcagggcctatgcaggtacggggcccagtgc
acctccgcgcactctcaggaggagctgacggagtggcagcagcgctacgcctcccggctc
atccgcctcaagcagcagcaggagagcaagcacttcaccgagaactacatggaggcgctc
atcgagaagtggatgaactccctctccccggagaaagtgttgagtgactatttggacggt
gtgaatgtggaacacagctccgacctgtcggtgacggtcacctccaagaaatcatctcac
tcctggacgttctcgctcctatgcaagcccgcccggacgctgtaccgcatcgccctgctg
tacgacgcccaccggccccacttcgccatcacggcggtgtcggcgggcgacgcctccgcc
cagctgctgcaggaggtgccgggcggctgccaggagtggaccggcgacggcgccgcccag
aacggcatggaccactgcctctacaaggtggcggtgggcttcagcaccgagatcttcggc
accttccggcagaccatcgtcttcgacttcggctcggagcccgtgctgatgcagagggtc
atggtggacgccgcctccatcgaggacctggagcacctgaagcaggcgcggcagcagctg
ctgatgacggccaagcgctgggactcgtcctgcaagaccatcgtggagttcgggcccaac
gagaccatggagctggagcgcggcctgctggcccgctaccagatcccgctctcggccgac
cagctcttcacccagtccgtcctggacaagacgctgacccgggagaactaccaggcccgg
ctgcacgacctgctctacatcgaggagatcgcccagtacaaggaagtcagcaagttcaac
atcaaggtgaacctccagctggtgaccagcttcatgctgacgggcatctcgggcggcgcc
aagtacgcccagaacgggcagctgttcggccgcttcaagctgacggagacgctgtcggag
gacacgctggccggccggctggtcatgaccaaggtcaactcggtcctgctgctgccgctg
cagcgcgagtggtccagccagccgcccggcgtcaaggagcgcgtctacgagggcctgatc
gaggagaagaccaaggactacatcttcctgcgcatctgcaaggactgctgcgacgagctg
tgcctgcagccggacagggaactgcaggtggagctgcagttccagctgaaccgcctgccg
ctctgcgaaatgcactacgccctggaccgcgtcaaggacaacggcatcctgttccccgac
gtcagcctcaccccgaccatcccctggagccccaacaggcagtgggacgagcagctggac
ccgcggctcaacgccaagcagaaggaggccatcctggccatcaccacgcccctgtccatc
cagctgccccccgtgctcatcatcgggccctacggcacgggcaagaccttcacgctggca
caggcggtcaagcacatcctcaagcagccagacagcagggtcctcatttgtacccactcc
aacagcgctgctgatctgtacataaaggattaccttcacccgtacgtggaagcaggcaat
ccccacgctcggcctctcagggtttacttccggaaccggtgggtgaagacggtgcacccc
ttggtgcagcagtactgcctgatctccagcacgcagttcaccttccagatgcccgagcgg
gaggacatcctcaagcacagggtggtggtggtgaccctcagcacctcccagtacctgtgc
cagctggacctggagcccggcctgttctcccacatcctgctggacgaggcggcccaggcc
atggagtgcgagaccatcatgccgttcgccctggccagcaggagcacccggatcgtcctg
gcgggagaccacatgcagctcagccccttcgtgtacagcgagtttgcccgcgagaggaac
ctgcacgtgtcgctgctggaccggctgtacgagcactacccggccgagtacccctgccgc
atcctgctgtgcgagaactaccgctcccacgaggccatcatcaattacacgtcggagctg
ttctacgatggcaagctgatggccagtgggaagcagccctcacacaaggacttctacccc
ctgaccttcttcactgcgaggggggaggacgtgcaggagaagaacagcaccgcctactac
aacaacgccgaggtgtttgagatcgtggagcgggtggaggagatgcggaagaagtggccg
gtggcctggggcaagctggacgagggcagcatcggggtggtgtccccctacgccgaccag
gtgttccgcatccgcgccgagctgcgcaagaagaggatgcccgaagtgagcgtggagcgg
gtgctcaacgtgcagggtaagcagttccgggtgctcttcctgagcacggtgcgcacccgc
cacacctgcaagcacaagcagaccgccatcaagaggaaggagcagctggtggaggactcc
acggaggacctggactacggcttcctgtccaactacaagctgctcaacacggccatcacc
cgcgcccagtccctggtggccgtggtgggggaccccatcgccctctgctccgtgggccgc
tgcaggaagttctgggagcggttcatctccatctgccacgagaacagcagcctgcacggg
atcaccttcgagcagatcaaggcgcagctggaggccctggagctgaagaagacctacgtg
ctcaaccccctggcccccgagttcatcccacgggccctccggccccagcacccccagggc
ttcagcaagcagcaggggtcccccccgaagggcaaagggcagcacgcgaaccaggccgag
cactttccaccggagggattcgtccagcccaacccggccgtgctgatgggccagcccatc
cgcgccttcacgccgcccctggggggcaccccggcgctggggggcaagtcccccagcccc
gtgcagaggatcgacccccacacgggcgccagcatcctgtacgtgcccgcggtgtacggg
gggaacatggtcatgtccgtgcctttgcccttaccctggcccagctatcaggggcgtttc
gccgtggacccgcgcatcatgagccacccggcggccgtggcctacaacatgaacctcctg
caggcccacagccgcggctcgcctgtcccctacggcgtcagccacccctcccccctgggc
gtgggccagcagaccagccccgacaaggagctgctcccggaagccagcagaaacgggaag
atggacggcggtgtgaaaccggagcagagccgactgcagacgccggagaggaaggccccc
gacctgaaagggaaacagggagagcctgacccgggacagaaccggagccccgagtcccag
gatgcactgggcttccccggcgcccggctccacaggaaggacaatcccggccagaggccc
ctcaacttccacctggcccccccgaacccggccatggccccccaccccaacagcagacag
ttcccgcaccaacagtaccccatgccccgccccccgttcagggtcccgccgcagcagcag
cagggcggcctgcctcctcaacacctggggcagatgcagcagctggcctcgcagtcgcat
gcgcagcatgcgcagcagcagccctcggcccagctctccccggccttccccgtggggaac
ccctctttcttccacgccccgccccacggcagggccctgcagtcccccggcctggaggcc
atgtccgcggagggccccgcggccggcatgatggcggaggaggccggcgggcccctcagg
cccctcccccagcagctgggccaccagccgcacccccagcccaatcgcatcaacagcttc
gccgaggaccaccccgaggcggcgatgggggaggggctcgacatccaggaggccctcagc
cagcaggcccggctcagccagtggaacgaacacaaccacctgctgcagggcggggtggcc
ttccccctgccccagcacctggcgcacctggcccagccgggcctgcgcttccccccgcag
ctgctgcgccccaactggaggatgggcgccggcggccaggacgaagccggcccgccgttc
cccaggttcccaggcctgctgcgggagatgggcccccaggagcagggcgagcagcgggac
ccgtcggagatgcccccgccccagtcccgcctcctgcagtaccggcaggtgccccaggac
ctgccccccccctccgccagccccagccacgggccgaccccccaggacggcgggcgcgag
ctcgagatgatcaacagccccgcctaccagcagcagcagcagcagcagcagcaccccgcc
tcccagatgtacggccccgccttcccccacgcccccggacactccaccccgccccccgtc
aagtacctgctgtcggacggccagtgggcccacggcggcctgccgccgggccacatgctg
ggccagggcttcccgttcggcgtgcccgtgctggcccaccggcaggagcagctgcacctc
ctgcagctccagcagcagcagcagcagcagaagtccctgcagcagcagcagcagcagcag
caacagcagccccccatcccgggacaggagagctaccacccgctgtcccctcgaaccatg
gccgcctcctccctgcagaacgtagaagagtatgaacccagagggcctggcaggccgctc
taccagcgtaggatctcctccagctcggcgcagccgtacccagacgattcgggcgccccc
cagggcgtcctgacgcagtgcaaggacccgcaggaccatccccatctctcgtacggctac
ccatccgccgaaacctggcccggcagcagcgcccctgtcccattccagaacattccatgc
aatggagccagcacacttccacacagggaccttttagcgccgtcgaaggctatgcgctcg
tccgaagaacacatgaaggcagagggcgtccagccgccggcccacgcgttcggctccctg
cagcacctcggacagttccctccgctcatgcccggcaagcagcccgcgcccgatcccgga
ggaggaggagggggcgggcccggcctgagcaagccccccaccatgtcctacgccagcgcc
ctccgtgccccgcccaagccccgccccctacccgagcaggttaaaaagaacagcgacccc
ttgtccttactgcaggaacttagaataggcagttcaaacaataccaacggatattattca
tattttaaatga
DBGET
integrated database retrieval system
