KEGG   Anguilla anguilla (European eel): 118220642
Entry
118220642         CDS       T07545                                 
Symbol
casc3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
aang  Anguilla anguilla (European eel)
Pathway
aang03013  Nucleocytoplasmic transport
aang03015  mRNA surveillance pathway
aang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118220642 (casc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    118220642 (casc3)
   03015 mRNA surveillance pathway
    118220642 (casc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aang03019]
    118220642 (casc3)
Messenger RNA biogenesis [BR:aang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     118220642 (casc3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 118220642
NCBI-ProteinID: XP_035260551
LinkDB
Position
2:27124915..27147101
AA seq 772 aa
MADRRRRRKRASQDSEEEDESGSGTESGGSCSAGGKARITVQEPVVLPTVHVRTKSEEES
ECESEDAIGEAVLSDYDSADPEDNGSHSEGEDEEEEEVVVVVEGKGFSDEEVSKQPEPQS
ATDKLVGDLGEEEDNEEESVGKEVKSDEKGNLEGERQSGDGQESTDDPENKSGSKAGKKL
DDDEDRKNPAYIPRKGLFFEHDVRGQAHEEDIRPKGRHRKLWKDEGRWEHDKFREDEQAP
KSREELIAMYGYDIRNSNGPSDGRPFRSRKPRYSCSPGREKRWRDGEKLSRSSWVGSGNS
GTLPAVVPTSSVAPPSGPAPPLPRVQGSGGRTSSHPQARSFQGHRPTSTSYRYKPPEENN
HQHHPLQHQGGFGRDGHKQHSEIEQGPVRRGRGEETEHSPAVVEEDLYEEEEPPKQQLQQ
QQPTYYSGKLSERDPAVPALHRRREEIPSAPVLPRDASPATTAAPERTVERKSYSLARRT
RAKPTELGKQVSLEESVPPVPATPQHAPSTVKSEAWETSGEGSSVQGGLTGLDQDLARLS
LAGQNWAQSPPSYLRAEMRGIHNSMHMAGGPPQYNRMEEMGVGGGRAKRYSSQRQRPVPE
PAPMHIGIMEGHYYEPVSFQGPIYAHSDSPTPLAPQGMLVQPEMHLTHPGHPGHPGLHPH
QSGAPMPNPAMYAGPAVSMSPGQPPPQQLLAPPFYPPPGVMTFGNTNFPYAAGATLPPMY
PNPQAQAQVYGGVTYYDTMQQQAQPKPSPPRRSSQPVTIKPPPPEVPFIVPE
NT seq 2319 nt   +upstreamnt  +downstreamnt
atggcggacaggcggcggcgacggaaacgcgcttcccaggacagtgaagaggaggacgaa
tccggttcgggtacagagagcggagggtcctgttccgctggaggaaaggcacgaataact
gtccaggagcctgtggtgttacctactgtacacgttcggacgaaaagcgaagaagaatcg
gaatgtgaaagcgaagacgccataggtgaggcagtgttgtctgactatgacagcgctgac
ccggaggataacggttctcactctgagggagaggacgaggaggaggaagaggtggtggtg
gtggtggaaggcaaggggtttagtgatgaagaggtatccaaacaacctgagcctcaatct
gctacagataagcttgttggagatttgggagaggaagaggacaatgaagaggagagtgtg
ggtaaagaagtcaagtctgatgaaaaagggaacctggaaggagagagacagagtggggat
ggacaggaaagcactgatgacccagagaacaagtctggcagcaaggctggcaagaagctg
gatgacgacgaagaccggaaaaaccccgcttacatccctcgaaagggtctgttcttcgag
cacgacgtgagggggcaggcccatgaggaagacattcggcccaagggacgacacaggaag
ttgtggaaggatgaggggcgctgggagcatgacaaattccgagaggatgagcaggcacca
aagtcccgcgaggaactgattgccatgtatggttatgacatccgcaactccaatggcccc
agcgatggccgccccttcaggtctcgtaagccgagatacagctgttcccctggccgggag
aagaggtggagggacggagagaagctcagtcgctcatcttgggttggcagtggtaacagc
ggcaccctcccagctgtcgtcccaacttcctctgtggctcctccctctggtcctgcacca
cctctaccccgtgtccagggaagcggtggcagaacctcctcgcacccacaggctcgcagc
ttccaaggccaccgccccacttcaacctcttaccgttacaagccgccagaagaaaacaat
caccaacaccaccccctgcagcaccagggcggctttggccgggatggccacaagcagcac
tcagagattgagcagggccctgtgcgtaggggtaggggtgaagagactgaacacagccct
gccgtggtggaagaggacctgtatgaggaggaagagccaccaaagcagcaactgcaacag
cagcagcccacctactacagtggcaagctgtcagagcgggaccccgctgtccctgccctc
caccgccggcgggaggagatcccaagcgcgccagtgctgcccagagatgcctccccagcc
accactgcagcccctgaaaggacagtggagaggaagtcatactcactggcccgcaggact
cgtgccaagcccaccgagctgggcaagcaggtctcactggaggagtccgtcccgccggtg
ccagccaccccccagcatgccccgtctacagtgaagagcgaggcatgggagaccagcgga
gaaggcagtagtgtgcagggggggctaacggggctcgaccaggacctggctcgactcagt
ctggcggggcagaactgggcccagagccctccctcctacctgcgtgctgagatgaggggc
attcataactccatgcacatggctggcgggcccccacagtataaccgcatggaggaaatg
ggtgtgggtggtggccgagcaaagcgatactcctctcagagacagcggcccgtacccgag
ccagcacccatgcatatcggcattatggagggccactactatgagccagtgtctttccag
ggaccaatatatgcgcacagtgacagtcccacacctctcgcaccccaaggcatgcttgtc
cagccagagatgcacctcacacatcctggtcacccaggccatccaggactgcatcctcat
cagtcaggtgcccccatgcccaaccctgcaatgtatgctggtccagctgtctccatgtct
cctgggcagcctcctccccagcagcttctggccccccccttctacccccctcctggcgtc
atgacctttgggaataccaacttcccctacgcagctggggccacgctgccacctatgtac
cccaacccccaggcacaggcccaagtgtatggtggagtgacctactatgacaccatgcag
cagcaagcccagcccaagccttcccccccccgccgttcctcccagcctgttactatcaaa
ccccctcccccagaggtaccgttcattgtgccagagtaa

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