Anguilla anguilla (European eel): 118220642
Help
Entry
118220642 CDS
T07545
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03013
Nucleocytoplasmic transport
aang03015
mRNA surveillance pathway
aang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118220642 (casc3)
09122 Translation
03013 Nucleocytoplasmic transport
118220642 (casc3)
03015 mRNA surveillance pathway
118220642 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118220642 (casc3)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118220642 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
118220642
NCBI-ProteinID:
XP_035260551
LinkDB
All DBs
Position
2:27124915..27147101
Genome browser
AA seq
772 aa
AA seq
DB search
MADRRRRRKRASQDSEEEDESGSGTESGGSCSAGGKARITVQEPVVLPTVHVRTKSEEES
ECESEDAIGEAVLSDYDSADPEDNGSHSEGEDEEEEEVVVVVEGKGFSDEEVSKQPEPQS
ATDKLVGDLGEEEDNEEESVGKEVKSDEKGNLEGERQSGDGQESTDDPENKSGSKAGKKL
DDDEDRKNPAYIPRKGLFFEHDVRGQAHEEDIRPKGRHRKLWKDEGRWEHDKFREDEQAP
KSREELIAMYGYDIRNSNGPSDGRPFRSRKPRYSCSPGREKRWRDGEKLSRSSWVGSGNS
GTLPAVVPTSSVAPPSGPAPPLPRVQGSGGRTSSHPQARSFQGHRPTSTSYRYKPPEENN
HQHHPLQHQGGFGRDGHKQHSEIEQGPVRRGRGEETEHSPAVVEEDLYEEEEPPKQQLQQ
QQPTYYSGKLSERDPAVPALHRRREEIPSAPVLPRDASPATTAAPERTVERKSYSLARRT
RAKPTELGKQVSLEESVPPVPATPQHAPSTVKSEAWETSGEGSSVQGGLTGLDQDLARLS
LAGQNWAQSPPSYLRAEMRGIHNSMHMAGGPPQYNRMEEMGVGGGRAKRYSSQRQRPVPE
PAPMHIGIMEGHYYEPVSFQGPIYAHSDSPTPLAPQGMLVQPEMHLTHPGHPGHPGLHPH
QSGAPMPNPAMYAGPAVSMSPGQPPPQQLLAPPFYPPPGVMTFGNTNFPYAAGATLPPMY
PNPQAQAQVYGGVTYYDTMQQQAQPKPSPPRRSSQPVTIKPPPPEVPFIVPE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggcggcggcgacggaaacgcgcttcccaggacagtgaagaggaggacgaa
tccggttcgggtacagagagcggagggtcctgttccgctggaggaaaggcacgaataact
gtccaggagcctgtggtgttacctactgtacacgttcggacgaaaagcgaagaagaatcg
gaatgtgaaagcgaagacgccataggtgaggcagtgttgtctgactatgacagcgctgac
ccggaggataacggttctcactctgagggagaggacgaggaggaggaagaggtggtggtg
gtggtggaaggcaaggggtttagtgatgaagaggtatccaaacaacctgagcctcaatct
gctacagataagcttgttggagatttgggagaggaagaggacaatgaagaggagagtgtg
ggtaaagaagtcaagtctgatgaaaaagggaacctggaaggagagagacagagtggggat
ggacaggaaagcactgatgacccagagaacaagtctggcagcaaggctggcaagaagctg
gatgacgacgaagaccggaaaaaccccgcttacatccctcgaaagggtctgttcttcgag
cacgacgtgagggggcaggcccatgaggaagacattcggcccaagggacgacacaggaag
ttgtggaaggatgaggggcgctgggagcatgacaaattccgagaggatgagcaggcacca
aagtcccgcgaggaactgattgccatgtatggttatgacatccgcaactccaatggcccc
agcgatggccgccccttcaggtctcgtaagccgagatacagctgttcccctggccgggag
aagaggtggagggacggagagaagctcagtcgctcatcttgggttggcagtggtaacagc
ggcaccctcccagctgtcgtcccaacttcctctgtggctcctccctctggtcctgcacca
cctctaccccgtgtccagggaagcggtggcagaacctcctcgcacccacaggctcgcagc
ttccaaggccaccgccccacttcaacctcttaccgttacaagccgccagaagaaaacaat
caccaacaccaccccctgcagcaccagggcggctttggccgggatggccacaagcagcac
tcagagattgagcagggccctgtgcgtaggggtaggggtgaagagactgaacacagccct
gccgtggtggaagaggacctgtatgaggaggaagagccaccaaagcagcaactgcaacag
cagcagcccacctactacagtggcaagctgtcagagcgggaccccgctgtccctgccctc
caccgccggcgggaggagatcccaagcgcgccagtgctgcccagagatgcctccccagcc
accactgcagcccctgaaaggacagtggagaggaagtcatactcactggcccgcaggact
cgtgccaagcccaccgagctgggcaagcaggtctcactggaggagtccgtcccgccggtg
ccagccaccccccagcatgccccgtctacagtgaagagcgaggcatgggagaccagcgga
gaaggcagtagtgtgcagggggggctaacggggctcgaccaggacctggctcgactcagt
ctggcggggcagaactgggcccagagccctccctcctacctgcgtgctgagatgaggggc
attcataactccatgcacatggctggcgggcccccacagtataaccgcatggaggaaatg
ggtgtgggtggtggccgagcaaagcgatactcctctcagagacagcggcccgtacccgag
ccagcacccatgcatatcggcattatggagggccactactatgagccagtgtctttccag
ggaccaatatatgcgcacagtgacagtcccacacctctcgcaccccaaggcatgcttgtc
cagccagagatgcacctcacacatcctggtcacccaggccatccaggactgcatcctcat
cagtcaggtgcccccatgcccaaccctgcaatgtatgctggtccagctgtctccatgtct
cctgggcagcctcctccccagcagcttctggccccccccttctacccccctcctggcgtc
atgacctttgggaataccaacttcccctacgcagctggggccacgctgccacctatgtac
cccaacccccaggcacaggcccaagtgtatggtggagtgacctactatgacaccatgcag
cagcaagcccagcccaagccttcccccccccgccgttcctcccagcctgttactatcaaa
ccccctcccccagaggtaccgttcattgtgccagagtaa
DBGET
integrated database retrieval system