Anguilla anguilla (European eel): 118221143
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Entry
118221143 CDS
T07545
Symbol
msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118221143 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aang03400
]
118221143 (msh2)
DNA repair and recombination proteins [BR:
aang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
118221143 (msh2)
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
118221143
NCBI-ProteinID:
XP_035261809
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Position
2:20298467..20320204
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AA seq
932 aa
AA seq
DB search
MAVQPKQNLSMDSASEHGFLNFYFSMPEKPDTTVRLFDRNEYYTVHGKDALFAAKEVFKT
NGVIKNLGSGSRKLESVVLSKMNFESFVRDLLLVRQYRVEVYRNKGSSKEHDWQLTYKAS
PGNLTQFEEILFGGAGGSGAAAAGVVGVRLGSGDGQRMVGVGYVDSTLRKLGVCEFPDND
QFSNLEALLVQIGPKECVLPGGDSAGDIGKLRQVVQRGGILLSDRKKAEFNTKDMVQDLN
RLLRARKGETVSSAALPEMEKQVAMSSLAAVIKYLELLSDEANFGSFQLTTFDLSQYMRL
DNAAVQALNLFQGSPDDTTGTHSLAGLLNKCRTPQGQRLVNQWIKQPLMDHNKIEERLDL
VESFVEDAELRQSCHEDLLRRFPDLNRLAKKFQRQNSTLQDCYRVYQAVGQLPGLVQALE
RYSGKHMVLLNAVFSSPLNDLSADFDKYQEMIETTLDMNQIEHHEFLVKPSFDPTLSELR
ETMDSLEKSMQGALNAAARELGLEGGKTVKLESNAQLGYFLRVTCKEEKNLRNNKKFTML
DVQKNGVRFTNSKLSSLNEEYTKSREEYEEAQNAIVKEILSIASGYVDPLQTLNDVIAQL
DAVVSLALVSHSAPVPYVRPRVLEKGSGRLLLKGARHPCIEAQDDVAFIPNDVSFTRGEE
MFHIITGPNMGGKSTYIRQVGVIVLMAQMGCFVPCEEAEISVADSVLARVGAGDSQIKGV
STFMAEMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEFIASRINCFCLFAT
HFHELTALAQQIPTVRNLHVTALTTDSTLTMLYRVKKGVCDQSFGIHVAELASFPKHVIA
SAREKALELEEFQDVTQAGGEEEEGPEAKRRRLDRQEGEKIIEGFLAKVKALPAADMSDQ
AIQEELRKLKAEVLAQNNSFVSELASRSKSTA
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaaccaaagcagaacctgtccatggacagcgcatcagagcatggatttctg
aatttttatttctccatgcccgaaaaacctgacactactgtgcggctattcgatcgaaat
gagtactatacagtccacgggaaagatgcgctttttgcagcgaaagaggttttcaaaact
aacggagtcattaaaaatctcggctcagggagcaggaagctggagagtgtggttctcagt
aagatgaactttgagtcgttcgtgcgggacctgcttctggtgcggcagtacagagtggag
gtttacaggaacaagggctccagtaaggagcatgactggcagctgacctacaaggcgtct
cctggtaatctgacccagtttgaggagatcctctttgggggagctggggggtctggggca
gcagcggcgggcgtggtcggggtgcgcctgggttccggcgatgggcagcgcatggtgggc
gtgggctacgttgactccaccctgcggaagctcggggtgtgcgagttcccggacaatgac
cagttctccaatctggaggctctgctggtgcagatcggccccaaggagtgtgtactgcct
gggggtgacagtgctggggacatcggcaagctccgacaggtggtgcagcgtgggggcatt
ctcctgtcggacaggaagaaggcagaatttaacactaaggatatggtgcaggatctcaat
cgcctgctcagagccaggaagggtgagacagtatccagcgctgccctacctgagatggag
aaacaggttgccatgtcatctctggcggcagtcatcaagtatctggagctgctctccgac
gaggccaactttggctccttccagttgacgaccttcgacctcagccagtacatgcgtctg
gacaacgccgctgtccaggccctcaacctcttccagggttcccctgacgacacgacgggg
acgcactccctggccggcctactgaataaatgcaggaccccacagggacagcgactggtc
aaccagtggatcaaacagcccctgatggaccacaacaagatcgaagagaggttggacctg
gtggagagctttgtggaggacgcggagctgaggcagagctgccatgaggacctgctccgg
cgttttccggacctcaaccgcctggccaagaagttccagagacagaactccactctgcag
gactgctaccgggtctaccaggccgtgggccagctgccgggcctggtgcaggctctggag
agatacagcggaaaacacatggtcctgctgaacgcagtgttcagctctcctttgaatgac
ctcagcgctgactttgataagtaccaggagatgattgagaccacgctggatatgaatcag
atcgagcaccacgagttcctggtgaagccgtcatttgaccccactctgagcgagctgcgt
gagactatggacagcctggagaagagcatgcagggtgccctgaatgctgctgccagagag
ctgggcctggagggggggaagacggtgaagctggagtcgaacgcccagctggggtacttc
ctcagagtcacctgcaaggaggagaagaacctgcgcaacaacaagaagttcaccatgctg
gacgtgcagaagaacggagtccgcttcaccaacagcaagctgagctctctgaacgaggag
tacaccaagagcagggaggagtacgaggaggcccagaacgccatcgtcaaggagatcctc
agcatcgcctcaggctacgtggaccccttgcagacgctgaatgacgtgatcgcccagctg
gacgcggtggtgagcctggccctggtgtcccactccgcccccgtgccctacgtgcgcccc
agggtcctggagaaggggtccgggaggctgctgctgaagggggccaggcacccctgcatc
gaggcccaggacgacgtggccttcatccccaatgacgtgtccttcacccgaggagaggag
atgttccacatcatcaccggcccaaacatgggcggcaagtccacctacatccggcaggtg
ggggtgatcgtgctgatggcgcagatgggctgcttcgtgccgtgcgaggaggcggagatc
agcgtggcggactcggtgctggcccgcgtcggcgccggcgacagccagatcaagggcgtg
tccacgttcatggccgagatgctggagaccgccgccatcctccgctcagccactgaagac
tccctcataatcatcgatgagctcgggcgcggcacctccacgtacgacggcttcggtctg
gcgtgggcgatctccgagttcatcgcctcgcgcatcaactgcttctgcctgttcgccacg
cacttccacgagctgaccgccctggcccagcagatcccgaccgtgcgcaacctccacgtc
acggcgctgaccaccgacagcactctaaccatgctgtacagggttaagaaaggtgtgtgt
gaccagagctttgggattcacgtggcggagctggcgagcttcccgaagcacgtgattgcc
agcgcgcgggagaaagccctggagctggaggagttccaggacgtgacccaggcgggcggg
gaggaagaggaagggcccgaggcgaagaggcggcgtttagacagacaggagggggaaaag
ataatcgaaggtttcctggccaaggtgaaggccctgcctgctgcagacatgtctgaccag
gccatccaggaggagctcaggaaactgaaggccgaggttctggcccagaacaacagcttc
gtgagcgagctcgcttcccggtccaaaagcaccgcttaa
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