Anguilla anguilla (European eel): 118221164
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Entry
118221164 CDS
T07545
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aang03016
]
118221164 (trub1)
Enzymes [BR:
aang01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
118221164 (trub1)
Transfer RNA biogenesis [BR:
aang03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
118221164 (trub1)
Prokaryotic type
118221164 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
118221164
NCBI-ProteinID:
XP_035261852
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Position
2:23172673..23215070
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AA seq
286 aa
AA seq
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MAGAQMASKSKLNSLHGLFAIYKKQGPTSADVLNILKSKLLQEAGLKQDNPRKRKKQALK
LGHGGTLDSAASGVLVVGIGNGTKMLSSMLKGSKKYTAIGELGKATDTLDATGSVTQEKA
FDHITREEFEEKLKKFTGEIMQVPPLYSALKQDGQRLSVLLKKGQRVEAKPARPVTVYSL
SLQDFTPPLFTLHIECGGGFYVRSLVDDLGRELASCAHVKELVRTKQGQFTLEDHTLREE
SWTIDDIARSLQVCDDQSKPSSAMDTPARSESPGDCGDHEEAQRKS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgcacaaatggcttcaaagtctaaactgaattctttacacggtcttttcgcg
atttataaaaaacaaggacctacatcggctgatgtgttaaacatattaaaatcaaagcta
ttacaagaggccggtcttaaacaagataacccacggaagagaaaaaaacaagcgctgaaa
ctcggccacggtgggacgttggacagtgctgcttctggtgtgctagtggttggaattgga
aatggtaccaagatgctcagctctatgctcaaggggtcaaagaaatacacagccattggg
gagctaggaaaagccacagatactctggatgctacagggagtgtcacacaagagaaagca
tttgatcacattacccgggaggagtttgaggagaagctgaagaagtttacaggtgaaatc
atgcaggtgcctccactctattcagctctgaagcaggacggccagcggctctctgtcctg
ctgaaaaagggccagagggtggaggccaagcctgcacgccccgtcactgtgtacagcctg
tccctccaggacttcacccccccactgttcactctccatattgagtgtggaggagggttt
tatgtccggagtctggtagatgaccttggcagagagctggcatcctgcgctcacgtgaaa
gagctggttcggacaaagcagggccagttcactctggaggaccacaccctgcgggaggag
agctggaccattgatgacattgcccgttctctccaggtgtgtgatgaccagtccaagccc
tcatccgcgatggacacgcctgcccgttcggagtcgccgggtgactgcggggatcatgaa
gaagcacagaggaagtcctaa
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