Anguilla anguilla (European eel): 118222453
Help
Entry
118222453 CDS
T07545
Name
(RefSeq) putative ATP-dependent RNA helicase an3 isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118222453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118222453
03041 Spliceosome [BR:
aang03041
]
118222453
03036 Chromosome and associated proteins [BR:
aang03036
]
118222453
Enzymes [BR:
aang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118222453
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118222453
mRNA cycle factors
Common to processing body (P body) and stress granule
118222453
Spliceosome [BR:
aang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118222453
Chromosome and associated proteins [BR:
aang03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
118222453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
118222453
NCBI-ProteinID:
XP_035263949
LinkDB
All DBs
Position
3:24897252..24922876
Genome browser
AA seq
772 aa
AA seq
DB search
MSHVAIENVHGLDQQLAALDLNAANGQGGGGTGRRYIPPHLRNKEASKNAGNSYASGRQS
GYSVAPVRSCYPGYPPQELPFSQNYCGGWPDRSDSPGWDGGRSNGFVNGYHDGRDNRMNG
DRNSFGGRGPTRTDRGGRGGYRGNRGGGSFNQSQPMQHSGFGYDNKDGGGWNAIKDNRDA
YTSFAGRADRGKSAFFNDRGSGSRGRYERPGFGSRDGGNSRWVEDSRDEEDWSKPTSPNE
RLEHELFSASNTGINFEKYDDIPVEATGSNCPPHIESFHDVDMGEIIMGNINLSRYTRPT
PVQKHAIPIIKAKRDLMACAQTGSGKTAAFLLPVLSQIYTEGPGEALQAAKASSQENGKY
GRRKQYPISLVLAPTRELALQIYDEARKFAYRSKVRPCVVYGGADIGQQIRDLERGCHLL
VATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRHTMM
FSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATVI
PSEVQENASEGPEKPGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEA
LHQFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATS
FFNDKNSNITKDLLDILVEAKQEVPSWLESLAYEHQHKSCTRGRSKRFSGGFGARDYRQT
SSSNSSFGSRGGRNTGGHGGNRGFGGGKGGFGNFYSSDGYGGNYSQVDWWGN
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccattgaaaatgtacacggtctagatcagcagcttgctgccctggac
ttgaacgcagcaaacgggcagggtggaggtgggactggcaggcgttacattccaccgcat
ttaaggaacaaagaagcttctaaaaatgcaggaaattcttatgcctctggtagacagagc
ggttattctgtggcaccagtgagaagctgttacccgggataccctccgcaggagctcccc
ttttctcagaactactgtggcggctggccagacagaagtgattcgcctggatgggacggc
ggccgcagcaacggctttgtgaatggttaccacgatggcagggataaccgcatgaatggg
gatcgtaacagttttggaggacgcggacccactcgcacagacagaggtgggcgtggagga
taccgtggcaaccggggaggcggctcctttaaccagtctcagcccatgcaacattcagga
tttggctatgacaacaaagatggaggcggatggaacgccatcaaagacaacagggatgcc
tacaccagttttgccggacgcgccgacagagggaagtccgctttcttcaacgaccgcggg
tctggctcgagaggaaggtatgagcgcccagggttcggctccagggatggagggaacagc
cgctgggtggaggactccagggatgaggaggactggtccaagcccacgtcccccaacgag
cgcctggagcacgagctgttctcggcaagcaacaccgggatcaacttcgagaagtacgac
gacattcctgtcgaagccactggctccaactgccctccccatattgaaagtttccatgac
gtcgacatgggggagatcatcatggggaacatcaatctgagccgctacacccggcccacc
ccggtgcagaagcatgccattcccatcatcaaggcgaagagagacctgatggcctgcgct
cagacagggtctgggaaaaccgcggcgttcctcctcccagttctgagtcagatttacact
gaagggccaggggaggctctgcaggctgcgaaagccagtagccaggagaacggaaagtac
ggccggcgcaagcagtaccccatctccctggtcctggccccgaccagagagctcgcgctc
cagatttacgatgaggctcgaaagtttgcgtaccgctccaaagtgcgcccctgtgtggtg
tacggaggggctgacatcggccagcagatccgggacctggagcggggctgtcacctgctg
gtggccacgcccggccgtctggtggacatgatggagaggggaaagatagggttggactac
tgcaactatctggttctggacgaggctgacaggatgctggacatggggtttgagccccag
attcggcgcatcgtggagcaggacaccatgcccccgaagggccttcgccacaccatgatg
ttcagcgccaccttccccaaggaaatccagatcctggcccgggacttcctggaggagtac
atcttcctggccgtgggccgcgtcggctccacctccgagaacatcacccagaaagtggtc
tgggtggaagagagcgacaagaggtccttcctgctcgacctgctgaacgccacagtcatt
cccagtgaggttcaggaaaatgccagtgagggcccagagaagcctggcaaagactccctc
accctggtgttcgtggagacgaagaagggagccgacgcgctggaggacttcctgtaccgc
gagggctacgcctgcaccagtatccacggcgaccgctcccagagagaccgggaggaggcg
ctccaccagttccgctcgggacggtgccccattttggtcgccacggcagtggctgcccgt
ggactcgacatctccaacgtgaagcacgtcatcaactttgacctgcccagcgacatcgaa
gagtacgtccatcgcattgggcgtacgggccgcgtcggaaacctcgggctggcaacctcg
ttcttcaacgacaagaacagcaacatcaccaaggacctcttggacatcttggtcgaggcc
aagcaggaggttccttcctggctggagagcctggcctacgagcaccagcacaagagctgc
acccggggccgttctaagcggttctctggcgggttcggggccagggattaccgccagacc
agcagcagcaacagcagcttcggcagccgcggcgggcgcaacacggggggccacggggga
aaccgcggcttcggtggtggtaagggtggctttggaaacttctacagcagcgacggctac
ggaggaaactactcccaggtggactggtggggaaactaa
DBGET
integrated database retrieval system
