Anguilla anguilla (European eel): 118222583
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Entry
118222583 CDS
T07545
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B
KO
K14328
regulator of nonsense transcripts 3
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03013
Nucleocytoplasmic transport
aang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118222583 (upf3b)
03015 mRNA surveillance pathway
118222583 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118222583 (upf3b)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118222583 (upf3b)
mRNA cycle factors
P-body specific factors
118222583 (upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
118222583
NCBI-ProteinID:
XP_035264179
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All DBs
Position
3:complement(60890160..60894629)
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AA seq
467 aa
AA seq
DB search
MKEDKENARPREKKVEIKCEENEKQEKPSKEKKEAMTKIVVRRLPPSLTKEELEEQLQPL
PEVDYLEFFSNDTSLFPHLFSRAYINFKNQEDIVLFRDRFDGYVFIDNRGQEYPAIVEFA
PFQKIAKKKSKKKDAKAGTIDEDADYKKFLEHYNGDDEKLTSTPETLLEEIEAKTKELVA
KKTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEDRRKRKEAEKLKKGE
KNHEKDGEKSKEEPKIKLLKKPEKGDDVDSDKPKDKAKKTEKDKLKDDKALGGTDSKKRQ
NNENREDRGRKIEDDGRKEHRDRDVERERDRDRDRDRDRDRDRERRQKEKERLRRQDDER
RRRRDRHDGENYRKRDEDGKKEKDRVWEKRKNENVGDPPGHGDKPEKPTKDEKKEDSAKR
DRVRNKDRPAIQLYQPGARSRNRGGDLPAAERKPESEAKCPREKAED
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggacaaggagaatgcccgtccgagggagaagaaagtggagataaaatgtgaa
gaaaacgagaagcaagaaaagcctagtaaagagaagaaggaagcgatgacaaagatagtg
gtccgccgtctcccacccagtctaactaaagaggagctagaggagcaacttcagcccctt
cccgaggttgactacctggaattcttctcgaatgataccagcctgttcccccacctgttc
tccagggcttatataaatttcaagaaccaagaggatattgtccttttcagagaccggttt
gatggatatgttttcatagataacagagggcaggaatatccagccattgttgagtttgca
ccttttcaaaagattgccaaaaagaagagtaagaagaaagatgcgaaagctggcactatt
gacgaagatgctgactacaagaaatttttggaacattataatggagatgacgaaaaattg
acatctactcctgaaacgctgctggaagaaatcgaggctaaaacaaaagagttagttgca
aaaaaaacaactcctctcttggacttccttaaaaacaaacagcgaatcagagaggagaaa
aaagaggagaggagacgaagggaattggagcgtaagcgactgagggacgaggagcgccgc
aagtggcgggaggaggacaggaggaagcgcaaggaggcagagaagctgaaaaaaggagag
aaaaaccacgagaaagacggagaaaaatctaaggaagagccaaagattaagctcttgaag
aagccagagaaaggggatgatgtggactccgataagcccaaagataaggcgaagaaaacc
gaaaaggacaagctgaaggatgacaaggctctgggcggtaccgactcaaagaagcggcag
aacaacgaaaaccgtgaggataggggaaggaagattgaggacgatggccggaaggagcac
agagatcgggacgtggaacgggagagggatcgggatcgggatcgcgaccgggacagggac
agggacagggagcggcgtcagaaagagaaggagcgcctgaggagacaggacgatgaacga
cggaggaggagggatcgtcacgatggggagaactaccggaaacgagacgaggatggaaag
aaggagaaagaccgtgtctgggagaagagaaagaatgagaatgtgggagacccccccggt
catggtgataaacccgagaagcccaccaaagacgagaagaaggaagatagtgccaaaaga
gaccgtgtacgaaacaaggatcgccccgccatccagctgtaccagccaggagccagaagc
cgcaaccgaggaggagaccttccggccgcagaaaggaagccggagagcgaggccaagtgt
ccgcgagagaaagcagaggactga
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