Anguilla anguilla (European eel): 118222777
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Entry
118222777 CDS
T07545
Symbol
col4a6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04382
Cornified envelope formation
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04518
Integrin signaling
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118222777 (col4a6)
04518 Integrin signaling
118222777 (col4a6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118222777 (col4a6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118222777 (col4a6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118222777 (col4a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118222777 (col4a6)
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118222777 (col4a6)
Exosome [BR:
aang04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118222777 (col4a6)
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118222777 (col4a6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118222777
NCBI-ProteinID:
XP_035264496
LinkDB
All DBs
Position
3
Genome browser
AA seq
1732 aa
AA seq
DB search
MKYWICIFAVVSAVLESAHAGTKIEEPCAGRDCSGGCQCNPEKGSRGRPGPLGPMGPNGP
EGFVGGSGPSGPKGDKGHVGLRGPSGPKGDKGPMGVPGFPGTDGVPGHPGQDGGRGLPGI
DGCNGTIGDPGPRAGDGLPGLPGVVGPPGRKGQKGEPVFTGLGRGARGEPGLPGLDGLIG
QNGPSGLPGQMGRRGQDGYPGFPGPSGPPGPTGSPGVGLKGESGDKGDAGLPGPPGEQGD
DTLVGAAISTIFKGDKGDVGLPGDPGLPLVNGVVEFVGFPKGDKGTKGDIGYQGISGQPG
LPGPPGRFGYPGEVGEKGILGLPGGRGASGLNGPLGPPGIKGLPGSPGLPGYPGYPGSKG
EYGDQGFPGPPAFADGQGVSVQGSPGDPGISGLPGPTGDQGPSGFPGPPGPPGLSSPLSG
RPGRDGFPGTIGPKGEKGNPGRPAYGTEGRTGSPGFPGPPGPPGPIGENRFSNVLPSDIP
GQPGQPGQRGPPGVSGANGPKGDLGDCQCLGGGGFGQQGPPGRSGAPGSPGLLGRKGEIG
DTGSPGFPGPEGPTGIPGEWGFSGRKGEKGEPSFPQGLGQKGELGSPGPRGPPGDMGRPG
RDGTPGIPGYPGPPGDGGDGVVGERGFPGLPGAKGRPGGPGEPGIGYPGTAGVRGLPGDP
GINGLPGQPGLRGPPGDCCCGQAGVNEASFEEGGETLPCRISGEDGDPGLPGSPGSPGLK
GQPGFPGDAGRRGFDGLKGERGDSGIGGLPGPQGFPGPRGDPGASGLSADGLPGAQGKNG
LPGRSGEKGRPGEVLGATPGAPGLPGRPGELGDKGQPGTPGLPGGPGFDGRSGVPGLKGE
RGEDGYPGIPGQPGLPGDGVQGGIPGLAGPAGSKGFSGVPGCQGFPGLKGSSGDPGPPGP
AGMKGLPGDPGTPGQPGLRGLPGPAGPGAGNGFPGTPGRKGEKGSPGMLGFPGMPGSSGA
PGMPGLKGSPGFPGRNGLPGEFGAKGLKGDRGTSGRPGPASLPPRVGQLVKGEIGDSGQS
GFSGFPGQRGDKGSRGPPGQQGLPGLPGFPGQEKGQPGAPGLPGTSNVPGLPGPKGSPGI
IGFSGMSGPRGDDGAPGQPGFPGGPGQPGIKGERGDSFSVPGAPGAKGLPGDPGFPGGKG
SAGFPGDPGFPGSSGFSGQKGLPGEPGRPGQTGTPGFPGSKGLGGFPGPRGSEGSPGFPG
TPGTPGQKGLPGSPGLDGLNGLGGAKGLPGTPGLSDGGRPGAPGIPGQKGETGPSLPGTP
GIPGAKGAVGNQGAPGMTGFPGLPGPRGVSVVSDIVGPPGDPGLPGLDGEQGFRGPTGPP
GPAGPGTYQGDRGNPGTPGRPGEPGASGDPGAPGGSGLPGVAGLKGERGETGSSGTPGLP
GYQGEPGSFGQRGPKGFPGSAGRKGLPGIVIPPSTLPKISGEFGLSGTPGFPGELGPPGQ
PGNPGRYGSKGKPGLPGKLGPSGPGGIPGPAGDFGTPGFPGSIGAQGTPGKQGPPGLPGL
NPRSTGIGYTLVKHSQSSQVPPCPQGMAKLWEGYSLLYVEGQEKAHNQDLGFAGSCLPRF
STIPFLYCNVNELCYFASRNDKSYWLSTTAPIPMMPVEEQQISQYISRCSVCEAPSQAVA
VHSQDLSIPSCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGP
RGTCHYFANKYSFWLTTVQPERQFVEAPPQQTLKAGQLRSRVSRCQVCMKIL
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgaaatactggatttgtatatttgctgttgtctcggctgtcttggaatctgcgcacgcg
gggacgaagattgaggagccatgtgctggacgggactgcagcggagggtgccagtgcaat
cccgagaagggaagcaggggtcggccaggacctttggggccgatggggccaaatggacct
gaagggtttgtgggagggtcggggccctcaggacccaaaggagacaaaggccatgtggga
ctcaggggaccctccggaccgaaaggagacaaggggccaatgggtgtgccaggtttcccg
ggaactgacggtgttccaggtcaccctgggcaggacgggggcagaggacttccaggaata
gacgggtgcaacggcaccatcggcgacccaggtcccagggctggggatggattgccaggc
ctgcctggtgttgttgggccacctggtcggaagggtcagaaaggagagcctgtgttcacg
ggactgggcagaggcgcaaggggagagcctggtttgcctggactggatggtctgattggt
caaaatggcccgagtggactccctgggcaaatgggtcggagaggtcaagatggataccct
ggtttccctggtccttctggtccacctggtcctacagggagccccggtgtgggtttaaag
ggggaaagtggagacaagggggacgcgggtctacccggacccccaggagagcagggggat
gacacgctagtaggcgcagctataagcactatcttcaaaggagataagggagacgtgggc
ctgcccggcgacccaggcctcccactggtcaatggagtggtggagtttgtgggctttcct
aaaggagacaaaggaactaagggtgacattggttaccaggggatatcaggtcagccagga
ctaccaggaccaccgggccgttttggatacccaggcgaggttggtgagaagggaattctg
ggattgccaggaggacggggtgcttctggtttgaatggacctcttgggccaccgggcatc
aaggggttacctgggagccctggcttgcctggatatccaggatatcctggatctaaggga
gaatatggagatcaaggatttcctggacctcctgcatttgctgatgggcaaggggtgtct
gtccaaggttcccccggagacccagggattagtggcttaccaggtcctactggtgaccag
ggaccatcagggttcccaggaccacctggacccccagggctctcgtcccccctctcaggt
cgaccagggagggacgggttcccaggtaccattggccctaaaggagagaaagggaaccca
ggacgccctgcctatggcactgaggggcgcacagggtccccaggctttccaggccctccg
gggcctccagggccaataggagaaaatcgtttttcaaatgtattgccatctgacatacct
ggacaaccgggacagccaggccaaagagggccacctggagtttcaggtgcaaatggaccc
aaaggagatttgggtgactgccaatgcctcggtggtggagggtttggtcagcagggccca
ccaggccgttccggggcccctggttcccctgggttacttggcaggaagggcgaaattggc
gacacgggctcaccaggcttccctggccccgaagggcccactggtatccctggtgaatgg
ggcttttcagggcggaagggggagaagggtgaaccctccttcccacagggcctgggccag
aaaggcgaactaggctcaccggggccccgtgggcccccaggagacatggggcggcctggc
agagacggcactcctgggatccctggatatcctggaccccctggagatggtggcgatggc
gtggtcggggaaagaggattcccagggcttcctggtgctaaggggcggcccggcggtcca
ggagagcctgggattgggtatccaggcactgctggcgtccgtgggctacctggagacccc
ggtatcaatggtctccctggacagcctggtttacgtgggcccccaggtgactgttgctgt
gggcaggcgggtgttaatgaggcctctttcgaagagggaggcgagactctgccctgtcgg
atctcaggcgaagacggtgacccgggtctgcctggatccccaggatctccaggtctgaaa
ggccagcctggtttcccaggggatgctgggcgacgtggttttgatggcttgaagggtgag
agaggagactcaggcattggggggctgcctggaccacaaggtttcccaggtcccagaggc
gacccgggggcctccgggctctcggctgacggccttcccggtgctcagggaaagaatggc
ctgcctggtcgttctggggagaagggaagaccgggtgaggtgctgggggccactcctgga
gccccaggtctgccaggacgccctggagaactaggagacaaggggcagccagggacgccg
ggattgcctggtggaccaggttttgatgggcgttcgggggtacctgggctgaagggtgag
cgcggtgaagacggctaccccgggatcccgggtcagcctggcctgcctggggatggtgtg
cagggagggatcccgggccttgcaggacctgctgggagcaagggtttctctggagtgcca
ggctgtcaagggttcccagggctcaagggctcttctggagaccccggacctccagggcca
gctgggatgaagggcctgcctggagacccagggacccctggccagccaggactcaggggc
ctcccagggccagcaggacctggtgcaggaaacggcttccctggaacaccaggaaggaag
ggtgagaaggggtcacctggtatgttggggttccccggaatgccaggaagctctggtgcc
cctgggatgcctgggttgaagggttcaccaggtttccctggacggaatggcttgccagga
gaatttggtgcaaagggtctaaaaggggaccggggtacgtctggacgtccaggaccggcg
tctttgcctcccagagttggccagcttgtgaaaggggagataggggacagtggccagagt
ggcttttctggattccctggacaaagaggtgataaagggagccgggggccgccaggccag
cagggtctgccaggtctgccaggtttccctggtcaggagaaggggcagcctggagcccca
gggcttcctggaacttccaacgtccctggcctgcctggaccaaagggttctccgggaatt
attggcttctctggcatgtcagggcccaggggtgatgatggggctcctggtcaacctgga
ttccccggaggcccaggacagcctggtataaaaggtgagcgtggtgactccttcagtgta
cctggagcccctggtgctaaaggacttcctggagaccccggatttcccggtggaaaaggt
agtgcaggctttccaggagatcctggtttccctggatcttctggattcagtggacagaag
ggcctccctggagagccaggccgtccaggacagacgggtaccccagggttccctggcagc
aaaggtcttggagggttcccaggacccagaggatcggaagggtcaccaggttttccagga
actccaggcactcctggccagaaaggtttacctggctctccaggtcttgatggtctgaat
ggacttggtggagctaaaggtctacccggaactccaggtctaagtgacggaggtcgtcct
ggggcaccaggcattcctgggcaaaagggggaaacagggccatctttacccggaactcct
ggcatccctggagccaaaggggccgtaggaaaccaaggtgcacctggtatgacgggtttc
cccggtctgccgggccctcgaggggtctctgtcgtctccgacattgtaggtccccctgga
gatcccggtctacctggattagatggagagcaaggtttccgaggtcccacaggccccccg
ggtcctgctggcccaggcacttaccagggcgacagaggcaacccaggaacccctggcaga
cctggtgaacctggtgcaagtggtgaccctggggccccaggaggctctggactacctggc
gtcgcaggactcaaaggtgaaaggggtgaaactgggtccagtggaactccaggacttcca
ggctaccagggagaacctggatcttttgggcaacgaggaccaaaggggttcccaggctct
gctggcaggaagggacttcctggtatagttataccaccaagcaccttgccgaagatttca
ggagagtttggactttcaggaaccccagggtttccaggagagttgggtccccctggtcag
cctggaaatcctggtcgttatggttcaaaaggaaaacctggacttccagggaagttgggg
cctagcgggcctggaggtataccaggaccagctggagattttggcaccccaggatttcct
ggatctatcggagcgcagggtacccctgggaaacaggggccccctggcctccctggactc
aacccccgcagcaccggcatcggctacacgctggtgaagcacagccagtccagccaggtg
cccccatgtccgcagggcatggctaagctgtgggagggctacagtttgctgtatgtggaa
ggccaggaaaaggcccacaatcaggacctgggatttgcaggttcctgcttgccccgtttt
agcaccatccccttcctgtattgcaacgtcaacgagctctgctatttcgcaagccgcaac
gacaagtcctactggctgtccaccactgcgcccatccccatgatgcccgtggaagagcag
cagatctcccagtacatcagccgctgctccgtgtgcgaggccccctcccaggccgtggcc
gtccacagccaggacctctccatcccctcctgccccctcggctggaggagcctgtggatt
gggtactccttcctcatgcacaccgcggctggggcggagggcggaggccagtccctggtt
tctcccggctcctgcctggaggacttccgcgccacgcctttcatcgagtgcaacggcccc
cgtgggacgtgccactacttcgccaacaagtacagcttctggctgaccactgtgcagccg
gagcggcagttcgtggaggccccgccgcagcagaccctgaaggccggccagctgcgctcg
cgcgtcagccgctgccaggtctgcatgaagatcttgtag
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integrated database retrieval system
