Anguilla anguilla (European eel): 118222778
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Entry
118222778 CDS
T07545
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118222778 (col4a5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118222778 (col4a5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118222778 (col4a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118222778 (col4a5)
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118222778 (col4a5)
Exosome [BR:
aang04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118222778 (col4a5)
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118222778 (col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118222778
NCBI-ProteinID:
XP_035264501
LinkDB
All DBs
Position
3:complement(56234312..56287839)
Genome browser
AA seq
1694 aa
AA seq
DB search
MKNKNVKSLQNLVVGLLFITLCTGVLDSEAAACHGCVGGSNCDCSGVKGAKGERGFPGLQ
GQPGVPGFPGPEGPLGPRGEKGNDGPPGPAGPKGIRGPPGLPGFPGTPGIPGLPGQDGPP
GPRGTPGCNGTKGDRGFPGSSGLPGIQGFPGPPGLPGPKGDPGEVISSNQFGQKGDPGLP
GLPGVPGNPGPQGLPGPIGPTGPRGYEGRPGPPGPPGPKGNMGLNFQGPKGEKGETGLAG
PPGPPGQIGEQKRPTASEVQRGDKGDRGLPGEPGEPGLPGPPGPASGPAGSKGEPGEPGK
RGKPGKDGDPGPGGFPGQKGEPGQPGLAGRDGERGEKGDRGYPGPPGAVLSGPNFDRVGP
KGDKGFQGLPGQKGDRGSQGFTGPPGPPGLPGEGSAGIPGSPGFPGERGHKGDEGSPGIS
LPGPPGRPGQPGQSGPPGPPGPPGQIIDGGDCLPGAPGLPGLQGERGFPGESGQKGEKGE
TCVNCFVNGITIPGPPGPSGPQGLPGTPGFPGPKGDRGFPGSVGPSGGPGFPGPQGTPGN
PGLKGEPGDVISVGGLKGDKGDSGFPGAPGLPGLDGKPGRDGLQGPPGPKGFSGSQLVKG
ERGPPGQPGIPGLPGDRGPTGSPGFGPQGPPGEKGLQGVSGRSGPSGAPGQKGEPGQTLS
EKGAPGARGAPGDPGLPGGPGSPGQPGQPGFPGLPGTKGEPGLPGIGLPGPPGVKGYPGT
LGPAGIPGAPGRPGLDGLPGQPGVSGPKGEPGYGLPGPQGPPGFAGAKGLPGLKGDPGFP
GTPGQPGRSGFDGGPGPKGDPGRSGTPGARGPPGTPAYGLPGPSGPPGSPGPMGPPGDPG
FPGRNGEKGDPGPPGLDIPGLPGDRGNPGFPGSPGAVGPPGPLGTPGRDGQPGLPGPKGD
MGVMGTPGPVGNSGAPGPPGFPGPKGNDGFPGQPGGTGGPGPRGDTGEPGLPGPPGPSIS
LPLEQKGSKGDPGPPGLEGLPGQKGFAGMPGDPGSPGQDGRPGVPGPPGPKGDPGVPGQP
GASGIPGQKGNMGEMGFPGPSGVKGSPGQPGRPGSPGSPGVPGFTGSKGDPGLPGYGVPG
SPGSKGDPGLPGSPGSFGNKGQPGAPGLPGLPGSQGPKGDSGLPGFQGPPGSPGPKGLDG
APGPPGLIGPSGRPGEPGRGGSPGLPGDKGQAGRDGIPGPAGLKGDQGLPGYGLPGNPGL
PGLPGPKGDVGPFGQAGSPGFPGQKGDPGFPGLPGTPGNIGPPGPPGLPQQGPKGNIGLP
GPPGRGGPAGLPGLPGPEGPRGPPGSGGTKGEKGLPGPFGQSGLPGLKGDRGFPGSLGPP
GNPGRDGLKGDIGLPGVPGFPGPKGTSGSPGPLGARGDPGDLGPPGPPGDPGVSPGPIVL
KGDQGPPGPPGLPGGRGLPGPPGLEGLPGQPGSPGDPGPEGPPGFSGPIGRKGDTGPSGQ
PGQRGFPGPPGSDGPQGLPGIPGSVSAAHGFLITRHSQAVDVPFCPDGTNLIYDGYSLLY
VQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTHEPMPMSMAP
ITGENIKPFISRCAVCEAPAMVIAVHSQTIQLPSCPQNWDPLWIGYSFMMHTSAGAEGSG
QALASPGSCLESFRSAPFIECHGRGTCNYYGNSYSFWLATVDVSEMFRKPQAETLKAGNL
RTRVSRCVVCMKKT
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaaaacgttaagagtctgcaaaacctcgtcgtgggtctgctattcataacc
ctatgcaccggggttctggattcggaagcagcggcttgccatggctgtgtagggggatcg
aactgtgactgcagtggagtgaaaggagcgaagggggagagaggctttccaggactacag
ggccagccaggggtgccagggtttcctgggccggagggccctcttggaccgaggggagag
aagggcaatgatgggcctccaggaccggctggaccaaaaggaatcagaggtccaccaggg
cttcctggctttcctggaaccccagggattccaggtcttccaggacaggacggacctcca
ggaccgaggggaactccagggtgtaacgggacaaagggggaccgtggatttccaggaagc
tctggccttccggggatacaagggtttccaggtcctcccggtctaccaggtcccaagggg
gaccctggtgaagtcatctcatcaaaccaatttggacagaaaggagatcctggtttaccg
ggcctccccggtgtacccggaaacccaggacctcagggattgcctggtccgattggtcca
acgggcccccgtggttatgagggccgtcctgggcctcctggtccccctggacccaagggt
aacatgggtttgaacttccaaggacctaaaggagagaagggtgaaacgggtcttgcaggg
cctccggggcccccgggacagatcggagaacagaagaggccgacggcctctgaggtgcag
agaggagataagggggatcggggacttcctggagagcctggtgaacctggcctcccaggg
cctcctggtcctgccagcggtccagcaggctcaaaaggagagccaggtgaacctggaaaa
agggggaagccaggcaaagatggagacccaggtccaggaggattcccgggtcagaaagga
gagccaggccaaccaggtctagcaggccgagatggcgagaggggtgaaaaaggagatcgt
ggctaccctgggcctccgggcgctgtgctgagtggaccgaacttcgacagagtggggccc
aaaggtgacaagggtttccaagggttgcccgggcagaaaggggaccgtggctcgcaaggt
ttcactggacctcccggaccgccagggttaccaggggaggggtctgctggtatacctgga
tcacctggttttcctggagaaaggggccataaaggagatgaggggtcgccaggtatctcc
ttacctggacccccaggtaggcctggacaaccaggtcagtctggacctcccgggccccca
ggacccccaggacaaataattgatggtggagactgcctcccaggagccccagggttgcct
gggctacagggagaacgtggcttccctggagaatcagggcagaaaggtgaaaagggtgag
acctgtgttaactgtttcgtcaatgggattaccatccctggacctcctggcccctctggt
ccccaaggattgccaggaacccctggattccctgggcccaaaggtgacagaggatttcca
ggaagcgttggtccgagcgggggtcctggttttcctgggcctcagggtacacctggaaac
ccaggactgaagggcgaacccggagatgttatttctgttggtggacttaagggcgataag
ggtgactcagggttcccaggtgcgcctggcttaccaggcctggatggaaaacctggaagg
gatggattgcaaggtccaccaggacccaaaggtttttctgggtctcagttggttaaaggt
gaacgtggacccccaggacagcctggaattccaggcctccctggagacaggggtccaact
ggctccccaggatttggtcctcagggtcctcctggagagaaaggtcttcagggcgtttca
ggcagatcagggccttcgggtgcaccaggccaaaaaggtgaaccgggtcaaactctgtcg
gagaaaggggctccaggtgctagaggagcccctggagatcctggtctgccaggcggtccg
ggttctcctggtcagccaggacagcctggtttcccagggttaccagggacaaagggtgaa
cctggactccctggaattggcttaccagggcctcctggagtcaaaggataccctgggact
cttggcccggctggaattcctggagctccaggtcgcccaggtttggatgggctgcccggt
cagccaggcgtctcagggcccaagggtgagcctggctatggtttaccaggaccccagggg
cctccaggatttgcaggtgcgaaaggactccctgggctaaagggtgatcccggattccct
gggacccctggccagcctgggagatcaggctttgatggaggacctggcccaaaaggtgat
cctggtcgttctggcacacctggagctcgtggccctccaggtacccctgcatatggcctt
ccagggccctctggccctcctggcagtcctggacctatgggtcctcctggtgacccagga
ttccctggtaggaatggggagaagggtgaccctggacccccaggactggacatccctggt
ttacctggagacagggggaaccctggcttccctggatcaccaggtgctgtgggccctcct
ggtccccttggcacaccaggcagagatggacaacctgggctgcccggtccaaagggagat
atgggggtcatgggaacccctggacctgttggaaactcgggtgcccctggtccacctgga
ttccctggaccaaaaggcaacgacggctttcctggacagccagggggtacaggtggtcca
gggccaagaggagacacgggtgaacccgggctaccaggcccaccaggcccaagcatttcc
cttcccttggagcagaagggatcgaagggagatccaggtcccccaggcttggaaggtctg
ccaggacagaaaggctttgctgggatgcctggagaccctgggtcccccgggcaggatggg
cgacctggtgtgccaggacctccaggtccgaaaggtgaccctggggtaccaggtcagcca
ggagcttcaggaataccagggcagaagggaaacatgggagagatgggattcccaggaccc
agcggagtgaaaggaagtccagggcagccaggccgacctggatcacctggttcgccaggt
gtccctgggtttacaggttctaagggtgaccctggtttaccaggatatggagtgccagga
agccctggctctaagggtgatccgggtcttccgggatcccctggaagctttggaaacaaa
ggccagccaggtgccccaggcctgccaggtctaccaggtagccaaggaccaaagggtgat
tccggactcccaggatttcaaggtccgccgggtagtcctggccccaagggtctggacgga
gccccaggacccccagggctcattgggccctctggccgacccggagaaccaggccgtggt
gggtcccctggactgcccggagacaaaggacaagcaggccgggacggcatccctggacca
gctggattgaagggagaccaaggactgcctggctatggcctccccggaaacccaggtctt
ccaggattaccaggtccaaagggagacgtgggcccttttggtcaggctggtagcccaggc
ttccctggacagaagggtgatccgggatttcctggcttgcctggaacccctggtaatatt
gggcctccaggtccccctggactacctcagcaagggcccaaaggtaacatagggctccca
ggccctccaggaagaggcggccctgcaggtcttccaggtcttccaggtcctgagggaccc
cgtggcccccctggcagtggaggcacgaagggggagaaggggctgcctggcccgtttggc
cagtctggtctgcccggactgaaaggcgaccgcggattccctggttctttaggccctcct
ggcaatcctgggcgagatggattgaaaggagacattggactgcctggagtaccaggcttc
ccaggaccaaaggggacgagtggctcccctggcccacttggcgctcgtggcgatccagga
gatttaggtcctccagggccccctggtgaccccggtgtgtctccaggccccattgtactg
aaaggggaccaagggccaccagggcccccgggcctgccaggtgggcgtggcctccctggt
cccccaggattggaggggctcccaggtcagccgggaagcccgggagatccaggccctgag
ggtccaccaggattctctgggcccataggacgaaaaggagacactgggccttctggacag
ccaggtcaacgtgggtttccaggcccaccgggatcagacgggccccaggggcttcctggc
atacccgggtctgtttcagcagcccatggcttcctcatcacacgccacagtcaggccgta
gatgtgcctttctgtcctgacggcaccaacctgatctacgatggctactccctgttgtac
gtgcagggcaacgagagggctcatggtcaggacttgggtacggcgggcagctgtctgcgc
cgattcagcaccatgcccttcatgttctgcaacatcaacaacgtctgcaacttcgcctca
cgcaacgactactcgtactggctatccacgcatgagcccatgcccatgagcatggcgccc
atcaccggcgagaatatcaagcctttcatcagcagatgtgcggtctgtgaagcccctgcc
atggtgattgctgtgcacagccagactatccagcttccctcctgcccacagaactgggac
ccgctgtggattggctattccttcatgatgcacactagtgctggggcagagggctcggga
caggccttggcctcccctggatcctgccttgagtcgttccgctctgcccccttcatcgag
tgccacgggcggggcacatgcaattactacggcaactcctacagcttctggctggccacg
gtggacgtctctgaaatgttcaggaagccccaggcagaaacactgaaagcagggaacttg
cgaacacgcgtgagccgctgcgtggtgtgtatgaagaaaacgtaa
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