Anguilla anguilla (European eel): 118222778
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Entry
118222778 CDS
T07545
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04382
Cornified envelope formation
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118222778 (col4a5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118222778 (col4a5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118222778 (col4a5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118222778 (col4a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118222778 (col4a5)
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118222778 (col4a5)
Exosome [BR:
aang04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118222778 (col4a5)
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118222778 (col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118222778
NCBI-ProteinID:
XP_035264501
LinkDB
All DBs
Position
3:complement(56234312..56287839)
Genome browser
AA seq
1694 aa
AA seq
DB search
MKNKNVKSLQNLVVGLLFITLCTGVLDSEAAACHGCVGGSNCDCSGVKGAKGERGFPGLQ
GQPGVPGFPGPEGPLGPRGEKGNDGPPGPAGPKGIRGPPGLPGFPGTPGIPGLPGQDGPP
GPRGTPGCNGTKGDRGFPGSSGLPGIQGFPGPPGLPGPKGDPGEVISSNQFGQKGDPGLP
GLPGVPGNPGPQGLPGPIGPTGPRGYEGRPGPPGPPGPKGNMGLNFQGPKGEKGETGLAG
PPGPPGQIGEQKRPTASEVQRGDKGDRGLPGEPGEPGLPGPPGPASGPAGSKGEPGEPGK
RGKPGKDGDPGPGGFPGQKGEPGQPGLAGRDGERGEKGDRGYPGPPGAVLSGPNFDRVGP
KGDKGFQGLPGQKGDRGSQGFTGPPGPPGLPGEGSAGIPGSPGFPGERGHKGDEGSPGIS
LPGPPGRPGQPGQSGPPGPPGPPGQIIDGGDCLPGAPGLPGLQGERGFPGESGQKGEKGE
TCVNCFVNGITIPGPPGPSGPQGLPGTPGFPGPKGDRGFPGSVGPSGGPGFPGPQGTPGN
PGLKGEPGDVISVGGLKGDKGDSGFPGAPGLPGLDGKPGRDGLQGPPGPKGFSGSQLVKG
ERGPPGQPGIPGLPGDRGPTGSPGFGPQGPPGEKGLQGVSGRSGPSGAPGQKGEPGQTLS
EKGAPGARGAPGDPGLPGGPGSPGQPGQPGFPGLPGTKGEPGLPGIGLPGPPGVKGYPGT
LGPAGIPGAPGRPGLDGLPGQPGVSGPKGEPGYGLPGPQGPPGFAGAKGLPGLKGDPGFP
GTPGQPGRSGFDGGPGPKGDPGRSGTPGARGPPGTPAYGLPGPSGPPGSPGPMGPPGDPG
FPGRNGEKGDPGPPGLDIPGLPGDRGNPGFPGSPGAVGPPGPLGTPGRDGQPGLPGPKGD
MGVMGTPGPVGNSGAPGPPGFPGPKGNDGFPGQPGGTGGPGPRGDTGEPGLPGPPGPSIS
LPLEQKGSKGDPGPPGLEGLPGQKGFAGMPGDPGSPGQDGRPGVPGPPGPKGDPGVPGQP
GASGIPGQKGNMGEMGFPGPSGVKGSPGQPGRPGSPGSPGVPGFTGSKGDPGLPGYGVPG
SPGSKGDPGLPGSPGSFGNKGQPGAPGLPGLPGSQGPKGDSGLPGFQGPPGSPGPKGLDG
APGPPGLIGPSGRPGEPGRGGSPGLPGDKGQAGRDGIPGPAGLKGDQGLPGYGLPGNPGL
PGLPGPKGDVGPFGQAGSPGFPGQKGDPGFPGLPGTPGNIGPPGPPGLPQQGPKGNIGLP
GPPGRGGPAGLPGLPGPEGPRGPPGSGGTKGEKGLPGPFGQSGLPGLKGDRGFPGSLGPP
GNPGRDGLKGDIGLPGVPGFPGPKGTSGSPGPLGARGDPGDLGPPGPPGDPGVSPGPIVL
KGDQGPPGPPGLPGGRGLPGPPGLEGLPGQPGSPGDPGPEGPPGFSGPIGRKGDTGPSGQ
PGQRGFPGPPGSDGPQGLPGIPGSVSAAHGFLITRHSQAVDVPFCPDGTNLIYDGYSLLY
VQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTHEPMPMSMAP
ITGENIKPFISRCAVCEAPAMVIAVHSQTIQLPSCPQNWDPLWIGYSFMMHTSAGAEGSG
QALASPGSCLESFRSAPFIECHGRGTCNYYGNSYSFWLATVDVSEMFRKPQAETLKAGNL
RTRVSRCVVCMKKT
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaaaacgttaagagtctgcaaaacctcgtcgtgggtctgctattcataacc
ctatgcaccggggttctggattcggaagcagcggcttgccatggctgtgtagggggatcg
aactgtgactgcagtggagtgaaaggagcgaagggggagagaggctttccaggactacag
ggccagccaggggtgccagggtttcctgggccggagggccctcttggaccgaggggagag
aagggcaatgatgggcctccaggaccggctggaccaaaaggaatcagaggtccaccaggg
cttcctggctttcctggaaccccagggattccaggtcttccaggacaggacggacctcca
ggaccgaggggaactccagggtgtaacgggacaaagggggaccgtggatttccaggaagc
tctggccttccggggatacaagggtttccaggtcctcccggtctaccaggtcccaagggg
gaccctggtgaagtcatctcatcaaaccaatttggacagaaaggagatcctggtttaccg
ggcctccccggtgtacccggaaacccaggacctcagggattgcctggtccgattggtcca
acgggcccccgtggttatgagggccgtcctgggcctcctggtccccctggacccaagggt
aacatgggtttgaacttccaaggacctaaaggagagaagggtgaaacgggtcttgcaggg
cctccggggcccccgggacagatcggagaacagaagaggccgacggcctctgaggtgcag
agaggagataagggggatcggggacttcctggagagcctggtgaacctggcctcccaggg
cctcctggtcctgccagcggtccagcaggctcaaaaggagagccaggtgaacctggaaaa
agggggaagccaggcaaagatggagacccaggtccaggaggattcccgggtcagaaagga
gagccaggccaaccaggtctagcaggccgagatggcgagaggggtgaaaaaggagatcgt
ggctaccctgggcctccgggcgctgtgctgagtggaccgaacttcgacagagtggggccc
aaaggtgacaagggtttccaagggttgcccgggcagaaaggggaccgtggctcgcaaggt
ttcactggacctcccggaccgccagggttaccaggggaggggtctgctggtatacctgga
tcacctggttttcctggagaaaggggccataaaggagatgaggggtcgccaggtatctcc
ttacctggacccccaggtaggcctggacaaccaggtcagtctggacctcccgggccccca
ggacccccaggacaaataattgatggtggagactgcctcccaggagccccagggttgcct
gggctacagggagaacgtggcttccctggagaatcagggcagaaaggtgaaaagggtgag
acctgtgttaactgtttcgtcaatgggattaccatccctggacctcctggcccctctggt
ccccaaggattgccaggaacccctggattccctgggcccaaaggtgacagaggatttcca
ggaagcgttggtccgagcgggggtcctggttttcctgggcctcagggtacacctggaaac
ccaggactgaagggcgaacccggagatgttatttctgttggtggacttaagggcgataag
ggtgactcagggttcccaggtgcgcctggcttaccaggcctggatggaaaacctggaagg
gatggattgcaaggtccaccaggacccaaaggtttttctgggtctcagttggttaaaggt
gaacgtggacccccaggacagcctggaattccaggcctccctggagacaggggtccaact
ggctccccaggatttggtcctcagggtcctcctggagagaaaggtcttcagggcgtttca
ggcagatcagggccttcgggtgcaccaggccaaaaaggtgaaccgggtcaaactctgtcg
gagaaaggggctccaggtgctagaggagcccctggagatcctggtctgccaggcggtccg
ggttctcctggtcagccaggacagcctggtttcccagggttaccagggacaaagggtgaa
cctggactccctggaattggcttaccagggcctcctggagtcaaaggataccctgggact
cttggcccggctggaattcctggagctccaggtcgcccaggtttggatgggctgcccggt
cagccaggcgtctcagggcccaagggtgagcctggctatggtttaccaggaccccagggg
cctccaggatttgcaggtgcgaaaggactccctgggctaaagggtgatcccggattccct
gggacccctggccagcctgggagatcaggctttgatggaggacctggcccaaaaggtgat
cctggtcgttctggcacacctggagctcgtggccctccaggtacccctgcatatggcctt
ccagggccctctggccctcctggcagtcctggacctatgggtcctcctggtgacccagga
ttccctggtaggaatggggagaagggtgaccctggacccccaggactggacatccctggt
ttacctggagacagggggaaccctggcttccctggatcaccaggtgctgtgggccctcct
ggtccccttggcacaccaggcagagatggacaacctgggctgcccggtccaaagggagat
atgggggtcatgggaacccctggacctgttggaaactcgggtgcccctggtccacctgga
ttccctggaccaaaaggcaacgacggctttcctggacagccagggggtacaggtggtcca
gggccaagaggagacacgggtgaacccgggctaccaggcccaccaggcccaagcatttcc
cttcccttggagcagaagggatcgaagggagatccaggtcccccaggcttggaaggtctg
ccaggacagaaaggctttgctgggatgcctggagaccctgggtcccccgggcaggatggg
cgacctggtgtgccaggacctccaggtccgaaaggtgaccctggggtaccaggtcagcca
ggagcttcaggaataccagggcagaagggaaacatgggagagatgggattcccaggaccc
agcggagtgaaaggaagtccagggcagccaggccgacctggatcacctggttcgccaggt
gtccctgggtttacaggttctaagggtgaccctggtttaccaggatatggagtgccagga
agccctggctctaagggtgatccgggtcttccgggatcccctggaagctttggaaacaaa
ggccagccaggtgccccaggcctgccaggtctaccaggtagccaaggaccaaagggtgat
tccggactcccaggatttcaaggtccgccgggtagtcctggccccaagggtctggacgga
gccccaggacccccagggctcattgggccctctggccgacccggagaaccaggccgtggt
gggtcccctggactgcccggagacaaaggacaagcaggccgggacggcatccctggacca
gctggattgaagggagaccaaggactgcctggctatggcctccccggaaacccaggtctt
ccaggattaccaggtccaaagggagacgtgggcccttttggtcaggctggtagcccaggc
ttccctggacagaagggtgatccgggatttcctggcttgcctggaacccctggtaatatt
gggcctccaggtccccctggactacctcagcaagggcccaaaggtaacatagggctccca
ggccctccaggaagaggcggccctgcaggtcttccaggtcttccaggtcctgagggaccc
cgtggcccccctggcagtggaggcacgaagggggagaaggggctgcctggcccgtttggc
cagtctggtctgcccggactgaaaggcgaccgcggattccctggttctttaggccctcct
ggcaatcctgggcgagatggattgaaaggagacattggactgcctggagtaccaggcttc
ccaggaccaaaggggacgagtggctcccctggcccacttggcgctcgtggcgatccagga
gatttaggtcctccagggccccctggtgaccccggtgtgtctccaggccccattgtactg
aaaggggaccaagggccaccagggcccccgggcctgccaggtgggcgtggcctccctggt
cccccaggattggaggggctcccaggtcagccgggaagcccgggagatccaggccctgag
ggtccaccaggattctctgggcccataggacgaaaaggagacactgggccttctggacag
ccaggtcaacgtgggtttccaggcccaccgggatcagacgggccccaggggcttcctggc
atacccgggtctgtttcagcagcccatggcttcctcatcacacgccacagtcaggccgta
gatgtgcctttctgtcctgacggcaccaacctgatctacgatggctactccctgttgtac
gtgcagggcaacgagagggctcatggtcaggacttgggtacggcgggcagctgtctgcgc
cgattcagcaccatgcccttcatgttctgcaacatcaacaacgtctgcaacttcgcctca
cgcaacgactactcgtactggctatccacgcatgagcccatgcccatgagcatggcgccc
atcaccggcgagaatatcaagcctttcatcagcagatgtgcggtctgtgaagcccctgcc
atggtgattgctgtgcacagccagactatccagcttccctcctgcccacagaactgggac
ccgctgtggattggctattccttcatgatgcacactagtgctggggcagagggctcggga
caggccttggcctcccctggatcctgccttgagtcgttccgctctgcccccttcatcgag
tgccacgggcggggcacatgcaattactacggcaactcctacagcttctggctggccacg
gtggacgtctctgaaatgttcaggaagccccaggcagaaacactgaaagcagggaacttg
cgaacacgcgtgagccgctgcgtggtgtgtatgaagaaaacgtaa
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integrated database retrieval system
