Anguilla anguilla (European eel): 118223053
Help
Entry
118223053 CDS
T07545
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118223053 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aang03041
]
118223053 (sf3b1)
03036 Chromosome and associated proteins [BR:
aang03036
]
118223053 (sf3b1)
Spliceosome [BR:
aang03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
118223053 (sf3b1)
Complex B
118223053 (sf3b1)
Complex C
U2 SnRNP specific factors
118223053 (sf3b1)
Chromosome and associated proteins [BR:
aang03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118223053 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
Motif
Other DBs
NCBI-GeneID:
118223053
NCBI-ProteinID:
XP_035265008
LinkDB
All DBs
Position
3:68787036..68833432
Genome browser
AA seq
1325 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGMKAALLEEGEKGVGLDSTGYYDQEIYGGSDSRFDGYVTSI
AANEQEDDDEEDSSTSLLGQKKAGYHGPVAMLNAVPQSDEQYDPFAEHRPQKIADREDEY
KGRRRVLIISPERLDPFADGGKTPDPKQPARTYMDVMREQHLTKEEKEIRQQLAEKAKAG
ELKVVNGSAASQAAAAAAAAKRKRRWDQTADQTPTSGTPTSGTPKKVSSWDQADASVETP
GHTPGHTPSNSRWDETPGRAKGSETPGATPSTRMWEPTPSHTPAGAATPGRGDTPGHATP
GHGGATSSVRKNRWDETPKTERETPGHGSGWAETPRTDRGDESVGETPTPGASKRKSRWD
ETPASQMGSSTPLLTPGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPL
TDEELDAMFPEGYKVLPPPAGYVPIRTPARKLTATPTPIGGMTGFHMQTEDRTMKTVNDQ
PSGNLPFLKPDDIQYFDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQI
TDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIE
PLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASAL
GIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQ
KVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDA
EYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFW
QHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNL
GAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWR
LNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKA
IVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRIC
FELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIV
AETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMD
RDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRV
AIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPHVYNDEKNPFIRYE
LEYFL
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaaaacacacgaagacatcgaggctcagatcctggagatccagggg
atgaaggccgccctgctggaggaaggggagaagggcgtgggcctggattccaccggctac
tacgaccaggagatctacggcggcagcgacagccgcttcgacggctacgtcacctccatc
gccgcgaacgagcaagaggatgacgacgaggaagactcctccaccagtctgctggggcag
aagaaggcggggtatcatggtccggtggcgatgcttaacgccgttccgcagtcagatgag
cagtacgaccccttcgccgagcaccggccgcagaagatcgccgaccgcgaggatgagtac
aaaggccggcgtcgcgtcctgatcatctctccagagcggcttgaccctttcgcagacggg
ggcaaaacgccggaccccaagcagccggcccggacgtacatggatgtgatgagggagcag
cacctcaccaaagaggagaaagagatccggcagcagctggcggagaaggccaaagcgggg
gagctgaaggtggtgaacggctccgctgcctcccaggcggccgccgccgccgccgccgcc
aagcgcaagcgccgctgggaccagaccgccgaccagacgcccaccagcggcacgcccacc
agcggcacgcccaagaaggtctccagctgggaccaggccgacgccagcgtcgagacccca
ggccacaccccaggccacaccccctccaacagtcgctgggacgagacgcccgggcgggcc
aagggcagcgagacgccgggggccacgcccagcacgcgcatgtgggagccgacgcccagc
cacacgcccgcgggcgccgccaccccgggccgcggggacacgcccggccacgccacgccc
ggccacgggggagccacctccagcgtgcgcaagaaccgctgggacgagacgcccaagacg
gagcgagagaccccggggcacggcagcggctgggctgagacgccccgcacagacaggggg
gacgagtccgtgggggagacccccacccccggggccagcaagcgcaagtcccgctgggac
gagaccccggccagtcagatgggctcgtccacccctctgctcaccccggggaagaccccc
atcggcacccccgccatgaacatggccacgcccaccccaggtcacctgatgagcatgacg
cccgagcagctgcaggcctggcgctgggagcgggaaatcgacgagcggaaccgtccgctg
accgacgaggagctggacgccatgttccccgagggctacaaggtgctgcccccgcccgcg
ggatacgtgcccatccgcacccccgcccgcaagctgaccgccacccccacgcccatcggg
ggcatgaccgggttccacatgcagacggaggaccgcaccatgaagaccgtgaacgaccag
ccgtccgggaacctgcccttcctcaagcccgacgacatccagtacttcgacaagctgctg
gtggaggtggacgagtccactctgagcccagaggaacagaaggagcgcaagatcatgaaa
ctgctgctgaagatcaagaacggcacgccccccatgaggaaggctgctctgcgtcagatc
acagataaagcccgtgagtttggggcaggtcccctcttcaaccagatcctgcccctgctc
atgtcccccacgctggaggaccaggagcgccatctgctggtcaaagtcatcgaccgcatc
ctctacaagctggacgacctggtccgaccctacgtgcacaagatcctggtcgtgatcgag
cccttgctgattgatgaggattactacgccagagtggagggcagggagatcatctctaac
ctggccaaggctgccggcctggccaccatgatctccaccatgaggcccgacatcgacaac
atggacgagtacgtgaggaacaccacggcccgcgccttcgccgtggtggcgtccgcgctg
ggcatcccctcgctgctgcccttcctcaaggccgtctgcaagagcaagaagtcctggcag
gcgcgccacaccggcatcaagatcgtgcagcagatcgccatactcatgggctgcgccatc
ctgccccacctgcgcagcctggtggagatcatcgagcacggtctggtggacgagcagcag
aaggtgcgcaccatcagtgccctggccatcgctgccctggctgaggcggccacgccctac
ggtatcgagtccttcgactccgtgctcaagcccctgtggaagggcatccggcagcacagg
ggaaagggtctggcagccttcctgaaggccattggctacttgatccccctgatggacgct
gagtacgccaattactacaccagggaggtgatgctgatcctcatccgagagttccagtct
cctgatgaggagatgaagaagatcgtgctcaaggtggtgaagcagtgctgcgggaccgat
ggtgtggaggccaactacatcaagaccgagatcctgccccccttcttcaagcacttctgg
cagcaccggatggctctggaccgccggaactacagacagctggtggacaccacggtggag
ctggccaataaggtgggggcggcggagatcatctcgcgcatcgtggacgacctgaaggac
gaggcggagcagtaccgtaagatggtgatggagaccatcgagaagatcatgggcaacctg
ggcgcggccgacatcgaccacaagctggaggagcagctgatcgacggcatcctgtacgcc
ttccaggagcagaccacagaggactctgtgatgctgaacggtttcgggacggtggtcaac
gccctggggaagcgggtcaagccctacctgccgcagatctgcggtaccgtcctgtggcgt
ctcaacaacaagtccgccaaagtgcgccagcaggcggccgacctgatctcgcgcaccgcc
gtggtgatgaagacctgccaggaggagaagctgatggggcatttgggtgtggtgttgtat
gagtacctgggagaggagtaccctgaagttctggggagcatcctaggagccctgaaggcc
atcgtcaacgtcatcggcatgcacaagatgaccccgcccatcaaggacctgctgccgcgt
ctgacgcccatcctgaagaacaggcacgagaaggtgcaggagaactgcatcgacctggtg
ggcaggatcgccgacaggggggcggagtacgtgtcggcccgggagtggatgaggatctgc
ttcgagctgctggagctgctgaaggctcacaagaaggccattcgccgagccaccgtcaac
accttcggctacatcgccaaggccatcgggccccatgacgtgctggccacgctgctgaac
aacctgaaggtgcaggagcggcagaaccgcgtgtgcaccacggtggccatcgccatcgtg
gccgagacctgctcgccgttcaccgtgctgccggcgctgatgaacgagtaccgggtgccc
gagctgaacgtgcagaacggcgtgctcaagtccctctccttcctgttcgagtacatcggc
gagatgggcaaggactacatctacgccgtcacgccgctgctggaggacgcgctcatggac
agggacctggtgcaccggcagacggccagcgcggtggtgcagcacatgtccctgggcgtg
tacggcttcgggtgcgaggactcgctcaaccacctgctgaactacgtgtggcccaacgtg
ttcgagacctcgccccacgtcatccaggccgtcatgggggcgctggaggggctccgcgtg
gccatcgggccctgccgaatgctgcagtactgcctacagggtctgttccacccggcgcgg
aaggtgcgggacgtgtactggaagatctacaactccatctacatcgggtcccaggacgcc
ctgatcgcccactacccccacgtctacaacgacgaaaagaaccccttcatccgctacgag
ctggagtacttcctgtga
DBGET
integrated database retrieval system
