Anguilla anguilla (European eel): 118223119
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Entry
118223119 CDS
T07545
Symbol
scn1laa
Name
(RefSeq) sodium channel, voltage-gated, type I-like, alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aang04040
]
118223119 (scn1laa)
Ion channels [BR:
aang04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118223119 (scn1laa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Neur_chan_memb
ATP-synt_B
FixH
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
118223119
NCBI-ProteinID:
XP_035265173
LinkDB
All DBs
Position
3:38499120..38562073
Genome browser
AA seq
2003 aa
AA seq
DB search
MAQLLVPPGPDSFIPFCRESLVAIEKRIAEENAKRPKGERRNDDDDENGPKPNSDLEAGK
SLPFIYGDIPKGMVSTPLEDLDPFYSNQKTFIVLNRGKAIFRFNATPALYILSPFNPLRR
ISIKILVHALFSMLIMCTILTNCAFMTLSNPPEWTKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCIRLPIENATSDQGDLNRTLDLN
VTDFNLTSTFNWTEYSNNPENHYFLPNRRDALLCGNGSDAGQCPEGYLCIKAGRNPDYGY
TSFDTFGWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILAVV
AMAYDEQNQATMEEAQQKEQEFQAMLEQLKRQQEEAQAAAAAAAAAINESGEYSGRAGLT
ETSSEGSKLSSKSAKERRNRRKKRKQREEQERGEGEKFRKSESEDSIKRTSFRFSIDGNR
LSYEKRYSSPHQSLLSVRGSLFSPRRNSRTSLFSFRGRARDVGSENDFADDEHSTFEDAD
SRRGSLFVPRRSERRSSNISMSSHVLLPANGKMHCAVDCNGVVSLVGGASVPTSPVGLLL
PEVTVDKPTTDDNGTTTETEIKKKRSGSQQPSMDFLEDPVARQRALSVASILTNTMEELE
ESRQKCPPCWYKFANTFLIWDCCPMWLKIKEIVNLIVMDPFVDLAITICIVLNTLFMAME
HYPMTQQFNSVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYRECVCKIDENCTLPRWHMVDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LIVFMLVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQVAVGRIHRGIDYIKA
TLRRFFLSLCSQRKKVLDEIKPLEELHNPKENCISNHTGVEITKDPEYGNGTASGLSSSV
GKYVIDENDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSESSDIEGSKEKLADHQMS
SSEGSTVDIRPPGEGGESVELEPEESLDPEACFTEGCVRKFHCCQVSIEEGKGKMWWTLR
KTCFRIVEHNWFESFIIFMILLSSGALAFEDIYIEQRKTIKTVLEFADKVFTYIFILEML
LKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELTAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYFYCVNTTTDENFPTH
IVNNKSDCLALNESARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDLEEQP
EYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPVNKFQGCVFDFITKQAFDIVIMILICLNMVTMMVETDDQTEETDN
TLHWINLVFIILFTGECVLKMISLRHYYFTIGWNIFDFVVVILSIVGMFLSEVIEKYFVS
PTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSN
FAYVKREAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDCDSQQEHPGNT
YSGNCGNPSVGICFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEV
WEKFDPDATQFVEYNKLSDFADALDPPLRIPKPNKIQLIAMDLPMVSGERIHCLDILFAF
TKRVLGEGGEMDALRGQMEERFMASNPSKVSYEPITTTLRRKQEDMSAVIIQRAFRRYLI
RRTVKRASYMYREKIKAGVNLQDKEVLVIDKFNENSTSEKTDMTPSTASPPSYDSVTKPD
KDKYEKDKREKEDKGKDVRENKK
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggcacaactgcttgtaccgccaggaccagacagcttcatcccgttttgtcgcgagtct
ctcgtcgctatcgagaagcggatcgccgaggagaatgccaagaggcccaagggggagcgg
cgcaatgacgacgacgacgagaacgggcccaagcccaacagcgacctcgaggccgggaag
tcgctgccgttcatttacggggacattcctaaaggcatggtctccacgcccttggaggat
ctggacccattttacagcaatcagaaaacctttatagtattgaaccgagggaaggcaatc
ttccgctttaacgccactcctgccttgtacatcttaagtcccttcaaccctcttaggaga
atatcaattaaaattttggtacatgcattgttcagcatgctaatcatgtgcactatcttg
accaactgtgcgtttatgaccttgagtaaccctccagaatggacgaagaatgtagagtac
acattcactggaatatacactttcgaatctcttataaaaattcttgcaaggggcttctgt
gtagggaagtttaccttcctaagagacccctggaactggctggatttcagtgttattgtc
atggcatatgtgacagagtttgtggacctgggcaatgtctctgcactgagaacattcagg
gttctccgagccttgaaaactatatctgtcatcccaggcctgaagaccattgtgggtgcc
ctgatccagtcggtgaagaaactctcggatgttatgatcctcaccgtcttttgtctaagt
gtctttgcactaatagggctgcaactctttatgggtaatttaagacaaaaatgcataaga
ctgccaattgaaaatgccacctcagaccaaggagatttgaacaggacgttggacctaaat
gtgaccgatttcaatttaacgagcacgttcaactggaccgagtactccaacaatcccgag
aaccattatttcttaccaaatcgaagagatgctctgctttgtgggaatggcagtgatgct
gggcagtgcccagagggatacctttgcatcaaagcaggccgtaacccggactacggatac
acaagctttgatacgtttggctgggccttcctgtctctcttcagactgatgactcaggac
tactgggagaacctctaccaacagacactgagggctgctgggaaaccatacatgatcttc
ttcgtgctggtgatcttccttggctccttctacctggtcaacctgatcctggccgtggtg
gccatggcctacgacgagcaaaaccaagccaccatggaggaggcgcagcaaaaggagcag
gagttccaagccatgttggagcagctcaagagacagcaagaggaggcgcaggccgcggcg
gcagcagcggcggcggccatcaacgagagcggggagtacagcgggagagcgggactgacg
gaaacgtcgtcggagggctccaaactgagctccaagagcgccaaagagagacgcaacagg
cggaagaagaggaagcaaagggaggagcaggagaggggagagggcgagaagttccgcaag
tccgagtccgaggacagcatcaagaggaccagcttccgtttctccatcgatggcaacagg
ctgtcctacgagaagagatactcgtccccgcatcagtcactcctcagtgtccggggatcc
ctcttctccccccggaggaacagccgcaccagcctcttcagcttccgcggccgggcgagg
gacgtcggctcggagaacgacttcgccgacgacgagcacagcacgttcgaggacgccgac
agccgccggggttccctgttcgtcccgcgccggtccgagcgccgcagcagcaacatcagc
atgtcctcgcacgtgctcctgccggccaacggcaagatgcactgcgccgtcgactgcaac
ggggtggtgtccctggtgggcggagcctccgtgcccacatcacctgtcggactccttctg
ccagaggtgacagtagataagcccactaccgatgacaatggcacaaccacagaaacagag
atcaaaaagaagaggtcgggctcccagcagccttccatggactttttagaggacccagtt
gccagacaacgagcactgagcgttgcaagtattttaacaaacacaatggaggaacttgaa
gaatcaagacagaaatgcccaccctgctggtacaagttcgcaaacaccttccttatctgg
gactgttgccccatgtggctgaagattaaagaaattgtcaacctgattgtgatggaccca
ttcgtagacctggccatcaccatttgcattgtattaaacaccttgttcatggctatggag
cactacccaatgacacagcagttcaacagtgtgctgtcggtggggaatttggtgttcaca
gggattttcacagccgagatgtgctttaaaatcatcgctctggatccttactattatttc
caagaggggtggaatatatttgacgggatcatcgtcagcctaagcttaatggagctgggt
cttgccaatgtggaagggctgtctgtccttaggtcattccgattgctgagggtgttcaaa
ctagccaaatcctggcccacgctcaacatgctcatcaagatcatcggcaactcggtgggt
gccctgggaaacctgactctggtgctggccatcatcgtcttcatcttcgccgtggtgggc
atgcagctgttcgggaagagctaccgggaatgcgtgtgcaagatcgacgagaactgcacg
ctcccgcggtggcacatggtggacttcttccactccttcctcatcgtgttccgcgtgctg
tgcggcgagtggatcgagaccatgtgggactgcatggaggtggcgggccagaccatgtgc
ctcatcgtcttcatgctggtcatggtcatcggcaacctggtggtgctgaatctgttcctg
gccctgctgctcagctccttcagcgcggacaaccttgcggccacggacgacgacagcgag
atgaacaacctgcaggtcgcggtggggcgaatccaccgcggcatcgactacattaaggcc
accctccgccgcttcttcctgagcctctgctcccagaggaagaaggtcctggacgagatc
aagcccctggaggagctccataaccccaaagagaactgcatctctaaccacacgggcgtg
gagatcaccaaagaccccgagtacggaaacggcacggccagcggcctcagcagcagcgtg
gggaagtacgtgatcgacgagaacgactacatgtccttcatccacaaccccagcctcacc
gtcaccgtgcccatcgccgtgggtgagtccgatttcgagaacctcaacacggaagacttc
agcagcgagtcgtcagacatcgaaggcagcaaagagaagctggccgatcaccagatgagc
tcctcggaggggagcaccgtagacatcaggcccccgggagagggaggggagtcggtggag
ctggagcccgaggagtccctagaccctgaggcgtgtttcactgaaggctgcgtgcgtaag
ttccattgttgccaagtgagcatcgaagaaggcaaggggaagatgtggtggaccctcagg
aagacgtgcttcagaatcgtggagcacaactggtttgagagcttcatcatattcatgatc
ctgctgagcagcggggctctggcttttgaagacatatacattgagcagaggaagaccatt
aagacagtgctggagtttgctgacaaagtcttcacctacatcttcatcttggagatgctg
ttaaaatgggtcgcttacggatttgtgaaatacttcaccaatgcctggtgttggttggac
ttcttgattgttgatgtctctttggtgagcttggtagccaacgccctcggttactcggag
ctcactgccataaagtccctgcgaaccctgcgcgcactgaggcccttgcgagcgctgtca
cggtttgaggggatgagggtggtcgtcaacgctctcctcggggccattccttccatcatg
aacgtgctcctcgtctgcctgatcttctggctgatcttcagcatcatgggcgtcaacctc
ttcgcggggaagtacttctactgcgtgaacaccacgacagatgagaatttccccacacac
atcgtcaacaataagtccgactgcttggccctcaacgagagtgctcgctggaagaatgtc
aagatcaactttgacaacgtgggggccggctaccttgctctcctgcaagtggcaacattt
aaaggctggatggatatcatgtatgcagctgtggattcccgtgatctggaagagcagccg
gaatacgaagtgaacctctacatgtacctgtacttcgtcatcttcatcatctttggctcc
ttctttactctcaacctgttcattggtgtcatcatcgacaacttcaaccagcagaagaaa
aagtttggaggtcaagatatcttcatgaccgaggaacagaagaaatactacaatgcaatg
aagaagcttggatcaaagaaacctcagaagccaattccaagaccagtgaacaagttccag
gggtgtgtctttgacttcattacgaagcaagccttcgacatcgtcattatgatcctcatt
tgcctcaacatggtcaccatgatggtggaaacggatgaccagactgaagaaacggacaac
acacttcactggattaacctggtcttcattatcctcttcactggagagtgtgtgctgaag
atgatatcactccgccattattatttcaccatcggctggaacattttcgattttgttgtc
gtcatcctatcaatcgttggcatgtttctttcggaagtgattgaaaagtactttgtttcc
ccgaccttatttcgagtcatccgacttgcgaggattggtcgcatccttcggctcataaag
ggtgctaagggaattcgcacgctgctgtttgccttgatgatgtcacttcctgccttgttc
aacatcggtctcctgctcttcctggtcatgttcatctatgctatattcggcatgtcaaac
ttcgcctacgtcaagagggaagccggcatcgacgacatgttcaactttgagacatttggc
aacagcatgatctgcctgttccagatcaccacgtctgcgggctgggacggtctgttggcc
cccatcctcaacaaaagagaacctgactgcgacagtcagcaggagcaccccggcaacacg
tattcgggtaactgcggcaacccgtcggtgggaatctgtttctttgtgagctacatcatc
atctgcttcctgatcgtcgtcaacatgtacatcgccgtcatcctggagaacttcagcgtg
gccacggaggagagcgccgagccgctgagcgaggacgatttcgagatgttctacgaggtg
tgggagaagttcgaccccgacgccacgcagttcgtggagtacaacaagctgtctgacttc
gccgatgccctggaccccccgctccgcatacccaagcctaacaagatccagctgatcgcc
atggaccttcctatggtcagcggcgagaggattcactgcctggacatcctgtttgccttc
accaagcgtgtccttggagagggcggggagatggatgccctccggggccagatggaggag
cgcttcatggcgtccaatccctccaaggtatcctacgagcccatcaccaccacgcttcgc
cgcaagcaggaggacatgtccgccgtgatcatacagagagccttcagacggtatctcatc
cggagaactgttaaaagggcctcctacatgtacagggagaagatcaaagcgggggtgaac
ctacaggacaaggaggtcctggtaatagacaaattcaatgagaattccacctcggaaaaa
accgacatgaccccctccactgcgtctccaccctcgtacgatagcgtcacaaaacctgac
aaggacaaatacgaaaaagacaagagggaaaaagaggacaaaggcaaggatgtcagggag
aacaagaagtag
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integrated database retrieval system
