Anguilla anguilla (European eel): 118223305
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Entry
118223305 CDS
T07545
Symbol
pcdh11
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118223305 (pcdh11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aang01009
]
118223305 (pcdh11)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aang04515
]
118223305 (pcdh11)
Protein phosphatases and associated proteins [BR:
aang01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118223305 (pcdh11)
Cell adhesion molecules [BR:
aang04515
]
Cadherins
Protocadherins
118223305 (pcdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
TMEM154
DUF6249
Motif
Other DBs
NCBI-GeneID:
118223305
NCBI-ProteinID:
XP_035265555
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All DBs
Position
3:complement(51691436..51948379)
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AA seq
1272 aa
AA seq
DB search
MDLACEAHLLVVLITCLALQSWAQEKDYTVREELPENVRIGNLRKDLDLALDPSFKLSSP
LQFKPVYKTGDVPLVRVEANTGEIFTTSNRIDREKLCSGIFNEKRCFYELEVAVLPDEIF
RLVKIRFLIEDINDNAPLFQSTVINISIPENTAINSRYPVPSAVDPDVGINGIQHYELVK
SVSEFGLDIIETPEGDKWPQLIVQQNLDREQKDTFVMKIKVEDGGTPPKSSTAILQVTIS
DVNDNRPVFKESEIEVNIPENAPVGTSVTQIHATDADLGSNAQIHFSFSNQISAATKRLF
AIDSNTGLITVRQPLDREMTPVHKLIVLASDGSSTPSRATVTVNITDINDNVPSIDTRYI
MNPVNGTVLLSENAPLNTKIALITVTDRDADLNGKVTCYTDHDVPFRLKPVFDNQFLLET
AAPLDYEITREYAIKIVASDSGKPPLNTSAMVLIKIKDENDNAPIFPQPEIQLSIPENND
PSTQLIKISATDADSGRNAEITYSLGPDPPDGFNIDRRSGILSVGKRLDREKQEKYTFIV
IARDNGSPALQSNVTVKVMVQDINDNSPAFTHPEYNFYVPENLPLYGTVGLITVTDADAG
DNAVVTLSILNGKDNFIIDPKTGVIKPNITFDREQQSSYTFVVKAVDGGRPQSTSFAKIT
INVVDVNDNRPVFVIPSSNYSYDLVQSTTSPGSVVTRVFAIDNDTGMNAELQYSIIGGSQ
RGLFAIDKTTGNITLQEKIVAADQGLHRLVVQVKDLGQPESLHAIALVHLFVNETVSNAS
FIQEQLRRSMETPLDRNVGDTEVTPQANGYVIVVIAIIAGTMTVILVIFVTALVRCRQTP
RHKVVQKGKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPTHEHING
TLDLPVELEEQTMGKYNWATTPSTFKPDSPDLAKHYKSASPQPTFQIKPETPVAPKKHHV
IQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKAPGQIHTRQNQSQTPDKSFS
SVPPTCPHKIMVAVATGQAEQPRCPSPQQLLPTHPGGSQGDPRPTGGSNPSSMSETQRRV
TFHLPDGSQESCSDSGLGDPEPSSSASTTQPLPLGFTQEEYYEQTSPNSRTEGDGNSDPE
STIEVNLQKALAEASETCTQECLILGHSDSCWMPPALTQFQPSSNTTVPTFSFQQAWARG
AKLDGRHTLGRSVPKDDLDKGSNRPQFYNTLERHCGKKEDPVKVIPLANFNPSAQQTTAT
GSTAGFVHEHQL
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggacttagcctgtgaggcgcacctgctggtggttctgatcacctgcctggccttgcag
tcctgggcccaggagaaggactacacggtgcgggaggaactgcctgagaacgtacggatt
gggaacctgcgcaaggacctggacctggctctggaccccagctttaagctgtcatcaccg
ttgcagttcaaacctgtctacaagactggtgatgtgcctttagtgcgggtggaggccaac
acgggagagatcttcaccacctccaaccgcattgaccgcgagaagctttgctcgggcatc
ttcaacgagaagcgatgcttctacgagctggaggtggcagtgctgcccgacgagatcttc
cggctggtaaagatccgcttcctgattgaagacatcaatgacaacgcccccttgttccag
tccactgtcatcaacatctccatccccgagaacacggccattaattctcgctatcccgtc
ccgtctgctgtggacccagatgtggggatcaatggaattcagcactacgagcttgtgaag
agtgtgagtgaatttggactggatatcatcgagacccctgagggtgacaaatggccgcag
ctcatagtccagcagaacctcgaccgtgaacagaaggacacctttgtgatgaagatcaaa
gtggaagatggagggactcctccaaagtccagcactgccatcctacaggtcaccatctct
gatgtaaatgacaacaggccggtgttcaaagagagtgagattgaggtgaatattccagaa
aatgcacccgtgggcacgtcagtcacccagatccacgcaacggatgccgacctaggctcc
aacgcacagatccacttctccttcagcaaccagatatccgctgccaccaaacgactcttt
gcaattgacagcaacactggcctgatcactgttaggcagcccctggacagggagatgact
ccagttcacaagctcatcgtcctggctagtgatggaagctccacaccatcgagggcaaca
gtgacagtcaatatcacagacattaatgacaatgtgccgtccatagacacccgttacata
atgaaccccgttaatggcaccgtcctactatctgaaaatgccccccttaacactaaaata
gccctgatcactgtgacagacagggacgctgatctgaatgggaaagttacttgctacact
gaccatgatgtaccctttaggctgaagcctgtgtttgacaaccagtttctgctagaaacg
gcagctcctctagattacgagattactagagaatatgcaattaaaattgtggcctcggac
tcaggaaagcctcccctgaacacttcagctatggtcctcataaagataaaagatgaaaat
gacaatgctcccatctttcctcagcctgaaattcagctgtccattccagagaacaatgac
ccttcaacacagttgataaaaatcagtgccacagatgcggacagtggtcgtaatgctgaa
ataacttactccctaggccctgacccacctgacggctttaacatcgatcgccggtcagga
atcctttctgttgggaagaggctcgacagggaaaagcaggagaagtacacattcattgtc
attgcacgggataatggctcccctgctctacagagcaacgtgacggtgaaggtgatggtc
caggacattaatgacaatagcccagccttcactcaccctgagtataacttttacgtgcct
gaaaacctgccactgtatggtacagtgggcttgatcacggtcacggatgcagatgctggc
gacaacgcggtggtcaccctctctattctgaatggcaaagacaatttcataattgatcca
aaaactggtgtgataaagccaaacattacatttgacagggagcagcagagttcctacacc
tttgtggtgaaggcagtggatggcggtaggccgcagagcacctcttttgccaagatcaca
ataaacgttgtggatgtaaatgacaatcgacctgtgtttgtcataccttcgtctaactac
tcctacgacctggtccagtctactaccagccctgggtctgtggtgacaagagtctttgcc
atagacaatgacactggaatgaatgcagaactacagtacagcattattggtgggtctcaa
aggggtctgtttgctatagataaaacaactggtaacatcacgctgcaggagaagattgtt
gctgctgatcaaggcttgcacaggctggtggtacaggtcaaagacctgggacagccggag
tcattgcatgccattgccctggttcacctatttgtgaatgaaactgtgtccaacgcttcc
ttcatccaagagcagctacgtcggagcatggagaccccattggaccgcaatgtgggggac
actgaggtcacaccccaggctaatggctatgtcatcgtggtcattgccattattgcaggc
acaatgactgtcatcctggtcatttttgtgaccgccctggtgcgctgccgccagacaccc
aggcacaaggtggttcagaagggcaagcaaagcggtgagtgggtgtcgcccaatcaggaa
aaccgtcagatcaaaaagaagaagaagaaaaagaagaggtcgcccaagagtctgctgctg
aactttgtgactatcgaagaatcaaagccagatgaccccacccacgagcacatcaatggc
acactggacctcccagtggagctggaggagcagaccatggggaagtacaactgggccacc
actccatccaccttcaaacctgacagtccagatttggcaaagcactacaagtctgcttct
cctcagcctaccttccagattaaaccagagacccccgtcgcccccaagaagcaccatgtc
atccaggagctccccttggacaatacctttgtggtgggctgtgactcactttccaagtgc
tcctccagcagctccgacccctacagtgtatctgagtgcagctgtcaagggggcttcaag
gcgcctgggcaaatccacaccagacagaatcagagccagacccctgacaagtcattcagc
tcagttccgcccacgtgtccacataagatcatggtcgcggtggcaacagggcaagcagag
cagcccagatgtccctctccacagcaacttctgccaactcatcccggtggatcccaaggc
gatcccaggccaaccggtggatctaatccctccagcatgtccgagacgcagcggcgcgtg
acctttcacctcccagacggctctcaggagagctgcagtgacagcggcttgggcgacccg
gagcccagtagcagcgccagcaccacccagcctctgcccctgggcttcacgcaggaggag
tactatgagcagacctctcccaacagtcgtaccgaaggagacgggaactcagaccccgag
tccaccattgaagtgaacctgcagaaagccctagctgaagcttcagagacctgcactcag
gaatgcctgatactgggccactccgacagctgttggatgcctccagcattgacccagttc
cagccatccagcaacaccacagtgcccaccttcagcttccagcaggcctgggcccgcggt
gccaagctggatgggcgtcacaccctcggcaggtcggtgcccaaagacgatctcgacaag
ggaagcaaccggccgcagttctacaacacgctggagagacactgcgggaagaaggaggac
cctgtcaaggtcattcctctggccaacttcaacccatctgcccagcagacaacggccact
gggagcactgctggctttgtccatgagcatcagctataa
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