Anguilla anguilla (European eel): 118223554
Help
Entry
118223554 CDS
T07545
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118223554 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aang04131
]
118223554 (vps8)
Membrane trafficking [BR:
aang04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118223554 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Clathrin
WD40_CDC20-Fz
TPR_VPS8_2
zf-RING_Vps41
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
zf-RING_5
Beta-prop_EML_2
zf-C3HC4
ANAPC4_WD40
EIF3I
WDR55
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
118223554
NCBI-ProteinID:
XP_035266136
LinkDB
All DBs
Position
3:complement(39551057..39648041)
Genome browser
AA seq
1407 aa
AA seq
DB search
MSESPDTRSLVSASSQLNLMDIDAIDDKEFDIPQVDTPPTLESILNEPEDEEEPFVLEDT
YLLNTENMDAHSCETSSLASSDSGDRTHLKRRRRPVESTATVHGSVLRHSTLKGISAQIV
SAADKVDAGLPTAITVSSVIAVGTSHGLALVFGKDPSQALRLCLGSTAVGAQYGAVSALS
INHDCSRLLCGFAKGQITMWDLANGKLLRTITEAHPPGTAILHVKFTDDPTLAVCNDSGG
SVFELSFRRVMGVRSCDTRCLFSGSKGEVCCVEPLHSSPELKDHPITQYSLLAMASLTKI
LVIGLKPSLKVWMTFPYGKTDPASVPQLAWQFVAVHKAVNPMLAFCRGDAVHFLLVKKEE
SGAIHVIKQRQLHLNCDIISLTWINSRTLVLMDSGEKLHVVDRASQEELESLDMAEVQLV
YNSSHFKSLATGGNVSQALALVGEKACYQSVCSYGGQIVYLGTKSVHIMTLRNWRERVDC
LLKQERFVEALSLAWSFHEGTAKAVVGLFGDPAKRKGVVADKMVEILFQYADRSLKKCPE
QGKIQVMEQHFQDMVPVMVDYCLLLQRTDLLFNQIYGRLVENSVARGVFLESLEPYILSE
RLGCLTAPVMRDLLGHFQDNGMMDSVENCLVHMDITSLDIQQVLQMCWENQLYDAMIYVF
NSGMNDYISPMERLFQVIGPPLQEGKSLTDEQVVMGNKLLVYISCSLAGRAYPLGDIPED
LVPQVKNQVFEFLIRLHSVETSQEEEVYPYVRTLLHFDTREFLNVLALTFEDFQNDKQAL
EYQQRIVDILLTVMVENSDFTPSQVGCLFTFLARQLAKPDNTLFVNRKLFDQVLEFLCSP
DDDSRHTERQQVLLELLQVGGIVQFDESRLLHLAEKAEFYQICEFMYEKKHLYDKIIPCY
LKDPLRKEEIFNYVHNILSIPGYGPEEKRSVWEEALEHMQELVAIDPAKAADLVSVHFSE
EVRPIVDKLEDDSLVFQFIKCLLDPREGPNPQAVLRLSPDLHELHVGLLCRFSPRQVVDF
LKVSQDYRLEETIQITEQYSLHEATAYLLEKKGDVHGAFQVLLQTLKDKLVILTQESQTN
TEEEEEEEEQLPLQRVEAALGDIISLCHRSSHSLNQQQREALWFPLLEAMMSPQKLLKGP
TWRHTSEALKELTMQVLNSMTSFIALPAIIQRILQDPVYGKGKLAEIQGLILGMLDTFNY
EQTLLETTTNLLNHDLHWSLSHLRAVVSRGLHPRQDHCSICLQQYKRRQEAQDEIIIFSC
GHLYHCQCLQSKECGVAGERLHGWSCYKCMSGQGGRGGERNAASGGRSRSTSLAQTKVTS
AHRGSWGDATGRKMFKDATLDAQQSQSWEQLRCMYRGPSRLAIFSELSHSRGNEKSSLLN
PSQPSSGSIFHSENFQLKLSPPPLIEE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatcgccagatacgcgcagtttggtttctgcgtcttcccagctgaatttaatg
gacatagacgcgattgatgacaaagagtttgatatccctcaagtggacactcctcccacg
ttggaaagcattctgaatgagccggaggatgaggaggagccttttgtcctggaagacacg
tacctgctcaacacggagaacatggacgcccactcctgcgagacgtcctccttggccagc
tccgacagtggcgaccgcacgcacctgaagaggaggaggaggccggtggagagcactgcc
accgtacacggctcggtactccggcacagcaccctgaaaggcatctctgcccaaatcgtc
tctgctgctgacaaagttgatgccgggttgcccacagcaataacagtgtccagtgtgatt
gcggttgggacgtcacatgggctggccctggtgtttggaaaagaccccagccaggcgctg
cggctgtgtctgggcagcacggcggtgggggcgcagtacggcgcggtgtcggctctcagc
atcaatcacgactgctctcgcctgctctgcggcttcgctaaaggacagatcaccatgtgg
gatctggccaatgggaagcttttaaggaccatcacagaggcccacccccccggtactgcc
atcctgcacgtcaagttcacggatgacccaacgcttgctgtctgtaatgacagcggcggg
tcggtgttcgagctgtccttcaggagggttatgggtgtgcggtcgtgcgatacccgctgt
ctctttagtggctcgaagggggaggtgtgctgcgtggagcccctgcactccagcccagag
ctgaaggaccaccccatcactcagtactccctgctggccatggcttccctcaccaagatt
ttagtgatcgggttgaaaccgtctctcaaagtgtggatgacgtttccttatggcaagact
gatccagccagcgttccacagcttgcttggcagtttgtggcggtgcataaagctgtgaat
cccatgctggccttctgcagaggggacgctgttcacttcctgttggtaaagaaggaggag
tcgggtgctatccatgtcatcaaacagagacagctgcacctcaactgtgacatcatcagc
ctgacctggataaactcacggaccctggttctgatggacagtggggagaagctccatgtt
gtggaccgggccagtcaggaggagctggagagcctggacatggcggaggtgcagctggtc
tacaacagcagccacttcaagtctttggccaccgggggcaatgtcagccaggccctggca
ttagtgggggagaaggcgtgctaccagtctgtctgcagctatggaggtcagattgtctat
ttgggaactaagtctgtccacataatgacactaagaaactggcgagagagggtggattgc
ctgttgaagcaggagagatttgtggaggcgctgtctctagcctggtcttttcatgagggc
actgcaaaggctgtggttgggctgtttggagaccctgctaagaggaaaggagtggtggct
gacaagatggtggagattctgtttcagtatgccgaccgttctctgaagaagtgccctgag
caggggaagatccaagtgatggaacagcacttccaggacatggttcctgtcatggtggat
tactgtttgctgctgcagaggacggacctgctcttcaatcagatttatgggcgtctggtg
gagaactcggtcgcccggggggtgttcctggagagcctggagccctacatcctgagcgag
cgtctcggctgcttgaccgcgcccgtcatgcgggacctgctcggtcacttccaggacaac
ggcatgatggacagcgtggagaactgcctggtccacatggacatcaccagcctggacata
cagcaggtgctgcagatgtgttgggagaaccagctctatgatgccatgatctacgtcttc
aacagcgggatgaacgattacatcagccctatggagagattgttccaggtgattgggcca
ccgttgcaagagggaaagtctctgacagatgaacaggtggttatgggtaataagctgctt
gtgtatatcagctgttctttggctggacgagcctaccctctgggggatatcccagaagac
cttgttcctcaggtgaagaaccaggtgtttgagttcctgatccgtctgcactctgtggag
acttcccaggaagaggaagtgtacccctatgtccgcacattgctgcactttgacacccgg
gagttcctcaacgtcctggccctgacctttgaggacttccagaatgacaagcaggccttg
gagtaccagcagcggattgtggatattttattaacggtgatggtggagaactcagacttc
accccctcccaggtgggctgtctcttcacatttctggcccggcagctggccaagcctgac
aacaccctctttgtcaacaggaagctcttcgaccaggtcctggagtttctctgtagccca
gatgatgactccagacacacagagaggcaacaggtgttgctggaacttcttcaggtgggg
ggcattgtccaatttgatgagagccgactcctccacctggctgagaaggccgagttctac
cagatctgtgagttcatgtatgagaagaaacacctgtatgacaaaatcatcccctgctac
ctgaaggatccactccgaaaggaggagatattcaactacgtccacaacatcctgtccatc
ccgggctacgggccagaggagaagcggtccgtctgggaggaggctctggagcacatgcag
gagctggtggccattgaccctgccaaagcagcagacctggtctctgtgcacttctctgag
gaggtgcgccctatcgttgacaagctggaggatgattccttggtgttccagtttataaag
tgtctactagacccaagggaaggccctaatccccaggccgtcctgagactcagccccgac
ctccatgagctccacgtgggactgctgtgccgtttcagcccccgccaggtcgtcgacttc
ctgaaggtctctcaggactacagacttgaagagaccatccagatcacagagcagtacagc
ctccatgaggccacggcctacctgctggagaagaagggagacgtccatggagctttccaa
gttctgctgcagacgctgaaggacaaactcgtcatcctcacccaagagagtcaaactaac
acagaggaggaggaggaggaggaggagcagcttccactgcagagggtggaggcggcgctg
ggtgacatcatctctctgtgtcacaggagctctcatagcctcaaccagcagcagagagag
gccctctggtttcctcttcttgaggcgatgatgtcaccacagaagctcctgaaggggcca
acctggcggcacacgtcagaagccctgaaggagctgaccatgcaggtcctcaacagcatg
acgagcttcatcgccctgcccgccatcatccagcgcattctgcaggacccagtatatggg
aaaggcaagctggctgaaatccagggactgattctgggcatgctggacacctttaattat
gaacagacgctgctggagaccaccaccaacctgctgaaccacgacctgcactggtccctg
tcgcacctgcgggcggtggtgagtcgcggtctgcacccccggcaggaccactgcagcatc
tgtctgcagcagtacaagcgtcggcaggaggcccaggacgagatcattatcttcagctgc
gggcacctctaccactgccagtgcctgcagagtaaggagtgcggggtagcgggggagagg
ctgcacggctggagctgctacaagtgcatgtccggccagggcggccgtggcggagagagg
aacgccgcgagcggcgggcggagccgcagcacgtccctcgcacagaccaaagtcacttct
gctcatcgaggttcctggggtgacgctactgggagaaagatgtttaaggatgccacattg
gacgcccagcagagccagtcctgggagcagctgagatgtatgtacagaggtccctccagg
ttggcgatcttcagcgaattgtcccattctcgtggcaacgagaagtccagcctcctgaac
ccctcacagcccagctctgggagcattttccacagcgaaaacttccagctcaaactctcc
cctcctccgctgatcgaggagtag
DBGET
integrated database retrieval system
