Anguilla anguilla (European eel): 118223664
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Entry
118223664 CDS
T07545
Symbol
ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04622
RIG-I-like receptor signaling pathway
aang05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118223664 (ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118223664 (ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
aang04054
]
118223664 (ifih1)
Enzymes [BR:
aang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118223664 (ifih1)
Pattern recognition receptors [BR:
aang04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
118223664 (ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
CARD_2
RIG-I_C
DEAD
Helicase_C
ResIII
CARD
SWI2_SNF2
SNF2-rel_dom
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
118223664
NCBI-ProteinID:
XP_035266394
LinkDB
All DBs
Position
3:37895065..37921558
Genome browser
AA seq
1001 aa
AA seq
DB search
MTSDTDTDATLRHLVDCFRNRLKSLIQVEPVLDHIYFIERDQKDLILNKAKTETNQRAAD
LLIDTVINNPHPAGWCREFLNALEAGGCKHAAQYVDTEDLPSPSLEAQNDYVVQLVDLLA
PSLVEMKTDDVCMFCYTDGILTGEERDNINTETRNHGSIKGARLLLRRIAVKPPGWFSTF
LEALKQSEHFDLVRELTGVTTTEGGEEGTAVDSELAENSEKMAEGPEVAFASLHLGEESM
DSSSLLTDLDSSMEVASGDTDVDLYRGDAEKTQESPDETSEPGCSDEGAATEDPQDPEIV
LRDYQMEVAKPALEGKNIIICLPTGSGKTRAAVYITKNHLDSRAQKGQPGKVVILVNKVP
LVEQHYSKEFGKFLKRHYSVERVSGDSQLKISFSEIVKKNDIIICTAQILENAFKEAKND
EDEGIRLSDFSLMVIDECHHTQKGGVYNYVMTRYLKQKQKNNLLRKEQKEPSPIPQILGL
TASPGVGGAKNLAKAEEHILKICANLDAFKIMQPSTLLGDLKGPYKYTATAEKRKEDPFG
DVIKGIMNEIHAHAELYPPCDPGTQNYEQWAVQKEQNAAKEENQNVRVCAEHLRQYNEAL
YQSNTIRMCDAFDFLRKYHDQEVKKKMAPEEEEAIGRTETETFLFRLFIDKKKKLQNLAS
KPEYENKGLSELKTAILKEFTSRPEARGIIFTKTRRSAIALHQWIQENRKFEEAGVRASY
LIGGGDQSVVKPMTTKEQRDVLKKFSTGEINLLIATTVAEEGLDIPQCNVVIRYGLVTNE
IAMIQARGRGRAEDSSYILVEVEGSGVAEREGVNEFREKMMSKAIKKVQSLDRTVYEHKV
KELQMQAIMEKRVRTKKKKEKAMKREDPSRVTFSCRNCSKPVCTGKNIEIMATMHYVNVT
QEFQELFIVRENAALQERLLDYDTNGTIACKGCGHTWGSMMLYRGIDCPSLHIKNFVVTY
NDKQKTYNKWSELPIRFPAFDYCKYADMVADNSEDDDDDDD
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgatactgacactgatgcaactttacggcatctcgttgactgttttagaaat
aggctgaagagtcttattcaagttgagccagttttagatcatatctattttattgaacgc
gatcagaaagacctgatattaaataaagctaaaactgaaaccaatcaacgagcagcagac
ctcctcattgatacagttatcaataatccgcatccagctggctggtgtagggaattttta
aacgcacttgaagctggcggttgtaagcatgcagcccagtatgtggacacagaagatctc
ccttcaccttccttggaagcacaaaatgattacgtcgtgcaactcgttgatctgcttgct
cctagtctcgtagagatgaagacagacgacgtatgcatgttttgttacacggacggtatt
ctaactggggaagaaagggataatatcaacactgaaactagaaatcatggatcgattaag
ggcgcacgtctgcttctcagaaggattgctgtgaagccccctggttggttttctacattt
cttgaagcactgaaacaatctgaacactttgatcttgtccgagaactcacaggagtcacc
acaactgagggcggtgaagaaggcactgctgttgacagtgagcttgctgaaaacagcgag
aagatggcagagggccctgaagtggcattcgccagcctccacctcggagaggagtcaatg
gacagtagcagcctcctcacagaccttgacagctccatggaggttgcctctggagataca
gatgtggatctctatcgtggagacgctgaaaaaactcaagagagccctgatgagacttca
gagccaggttgcagtgatgagggggcggcaactgaagacccacaggaccccgaaattgtt
ctacgggattatcagatggaagtagcaaaacctgccttagaaggaaaaaacatcatcata
tgcctcccaacaggaagtggcaaaaccagagctgctgtttatattactaaaaaccatctg
gactccagggcacagaaagggcagccagggaaagttgtcatcctggttaacaaggtgcct
ctggtggagcagcactacagcaaagagtttggaaagtttctgaagcgccattacagtgtt
gagagggtcagtggcgactcccagctgaaaatctccttctcagagattgtgaaaaaaaat
gacatcatcatctgcacggcacaaatcctggagaatgccttcaaagaggcaaaaaacgat
gaagacgaaggaatccgtctttcagatttctctctgatggtgattgatgagtgccaccac
acgcagaagggcggggtgtacaactatgtgatgacccgctacctgaagcagaaacagaag
aacaatctgctgaggaaagagcagaaggagccctcccccattccccagatactggggctg
acggcctcgcccggcgtcggcggggccaagaacttggcgaaagctgaggagcacatcctg
aagatctgtgcaaatctggatgcattcaaaatcatgcaaccgtccacactactaggagac
ttgaaaggaccatacaaatataccgctacagctgaaaagagaaaagaggatccttttgga
gatgtgattaaaggaattatgaatgaaatacatgcacatgcggagctgtacccaccctgc
gaccctggcacccagaactatgagcagtgggctgtgcaaaaagagcaaaatgctgcgaaa
gaagaaaaccagaatgtgcgagtctgtgccgagcacctgcggcagtacaacgaggccctg
taccaaagcaacaccatccgaatgtgtgacgccttcgacttccttcgcaaataccatgac
caagaggtcaaaaagaaaatggccccagaggaggaagaagccataggccgcacagaaact
gagacattcctcttccgtctgtttatagataaaaagaagaaactgcaaaacttggcaagt
aagcctgagtatgagaacaagggcctttccgaactgaagactgccatactgaaagagttc
acaagcagacctgaggccaggggcatcattttcacaaagacgcgccgcagtgccatcgcg
ctgcatcagtggatacaggaaaacaggaagtttgaggaggccggggtcagggccagctat
ttaatcggagggggtgaccagagcgtggtgaaacctatgactaccaaggaacaaagggat
gttttgaagaagtttagcactggggagatcaacttgctcattgcaacaacagttgctgaa
gagggccttgacataccgcagtgcaatgttgttatcagatatggtctggtgaccaatgag
atcgccatgattcaggccagagggagagggagagcagaagacagtagctacattttggtg
gaagtggagggatctggggtggctgagagagagggcgtgaatgagttccgtgagaagatg
atgagcaaagccatcaagaaggttcaaagtttagatcgaactgtgtacgaacataaagta
aaggagttacagatgcaggccataatggaaaagcgtgttcgcaccaagaagaagaaggag
aaggcgatgaagagggaggatccttcaagggtgaccttcagctgccgaaactgcagcaag
ccggtgtgcaccggtaaaaacatagaaataatggcgactatgcactacgtgaatgtgacc
caagaatttcaggaactgttcattgttcgggaaaatgcagcactgcaggagaggctactg
gactatgatacaaacggcaccattgcatgcaaaggctgtgggcatacatggggttctatg
atgctgtaccgtgggattgactgtcctagccttcacatcaagaattttgtggtgacttac
aatgacaagcagaaaacgtataacaaatggagtgaacttcccatccgattcccagcattt
gattattgcaaatatgctgacatggttgccgacaattctgaagatgatgatgatgatgat
gattaa
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