Anguilla anguilla (European eel): 118224062
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Entry
118224062 CDS
T07545
Symbol
zgc:153681
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03008
Ribosome biogenesis in eukaryotes
aang03013
Nucleocytoplasmic transport
aang03015
mRNA surveillance pathway
aang05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118224062 (zgc:153681)
03015 mRNA surveillance pathway
118224062 (zgc:153681)
03008 Ribosome biogenesis in eukaryotes
118224062 (zgc:153681)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118224062 (zgc:153681)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118224062 (zgc:153681)
03009 Ribosome biogenesis [BR:
aang03009
]
118224062 (zgc:153681)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118224062 (zgc:153681)
mRNA cycle factors
Stress granule specific factors
118224062 (zgc:153681)
Ribosome biogenesis [BR:
aang03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
118224062 (zgc:153681)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_4
LRR_9
LRR_8
Motif
Other DBs
NCBI-GeneID:
118224062
NCBI-ProteinID:
XP_035267112
LinkDB
All DBs
Position
3:complement(12051409..12069234)
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AA seq
647 aa
AA seq
DB search
MKPFRKWYHNFAVVTHMHRDQDHDGVVFQREVRSDGWPIREHDDRVGGPQFRNRKGRGPF
RGRMYSEQSRQRHRGGPGGGAPGPRARFEDDDGDVAMNDSNSQDGSSQRRFNPYGRQGRR
GDGRFGDRRGGGGGGHRGGGGGGRKSWFRMTIPHGKKYDKKWLLTALQNLCSVPFTPIQY
HTEGNRAQFFVDDASTANALSKVSRKITDTEGYKVTVLMNPCVPPSSIQTDLKPEDLDHL
KQCMSKRFDGSQQALDLNSIRTDPDLVSQNIEVILNRKSCMQAVIKIIEENIPGLTCLNM
SNNRLYKLEDLAELVSKVPNMKTLNLSNNELKTERELDKLKGFKLVELWLDRNPLCDHFK
DQATYISAVRERFPRLLKLDGHDLPPPIGFDVEAPTTLPPCKGSYFVSDEIKSHILRFLQ
QYYSVYDSGDRQPLLDAYHDGASFSLSMPFSGQNPSRCSLGEYHKDSRNIKKLKDPTTRF
RLLKHTRLNVVAFLNELPKTQHDIASFNVDVNTFTNTLLSFTVSGVFKEVDGKSRDSVRA
FSRVFVAVPAGNTGLCIVNDELFVRNATTEEIRRAFAAPAPTPSSSPVPTLSAPHQEMLS
AFSLKSGMNLEWSQKCLQDNEWDFNRAAQIFTQLKAIGKIPDVAFLK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccttcagaaagtggtaccataactttgctgtggttacacatatgcaccgtgac
caagatcatgatggcgtcgtcttccagagagaggtcaggagtgatggttggccgattaga
gagcatgatgacagggttgggggcccccagtttcgcaaccgaaaagggcggggacccttc
aggggccgcatgtacagtgaacagtcgaggcagcggcatcgtgggggtccaggaggcggg
gctccaggtcccagggccaggtttgaagacgacgatggagatgtggcgatgaatgacagc
aactcacaagatggaagttcacagcgcagattcaacccatatggacggcaaggtcgccgg
ggtgatggccggtttggcgacagaagaggagggggaggtggaggccacaggggaggtgga
ggaggggggcgcaaaagctggttcaggatgactattccccacgggaagaaatatgacaag
aaatggctgctcacggctctgcagaacctgtgctccgtgcctttcactcccatacagtac
cacacggaggggaacagggcacagtttttcgtcgacgatgcctccactgccaacgccctg
agcaaagtgtcgcgcaagatcacggacactgaaggctacaaggtgactgtactgatgaac
ccctgcgtccccccctcctcgattcagacagacctgaagccagaggacctagaccatcta
aagcaatgcatgtccaagcgatttgatggctcacaacaagcacttgacttgaacagcatt
aggacagacccagacctggtttcccagaacattgaggtgattctgaacaggaagagctgt
atgcaggctgtcatcaaaatcattgaggagaatatccctgggctgacatgtctaaatatg
agcaacaacaggctttataagctagaggatctggcagagctggtcagtaaggtgccgaac
atgaagacactcaatctctccaacaacgagctgaagactgagcgggagctggacaaattg
aagggcttcaagctagtggagctgtggctggacaggaatccgctgtgcgaccatttcaag
gaccaggccacctacatcagcgctgtgagagaacggtttccgcggttactcaaactggat
ggtcacgatctgcccccgcccatcggatttgacgtggaagcgcccacgactctccccccc
tgcaagggaagctacttcgtgtcagatgaaatcaagagccacatactgcggttcctacaa
cagtactacagcgtttatgactcgggtgaccggcagcctctgttggatgcctaccacgac
ggagcttccttctccctcagcatgcccttctctgggcagaacccctccaggtgcagtcta
ggggagtatcacaaggacagccgcaacatcaagaagcttaaagatcccaccactcgattc
cgcctgttgaagcacacgcggttgaacgtggtagccttcttaaacgagctgccaaagacc
cagcatgacattgcttccttcaacgtcgatgtgaacacgttcactaacacgttactgtca
ttcacggtcagcggggtgttcaaagaagtggacggtaaatccagagactcagtcagagcg
ttttctcgggtctttgtcgcagtgccggcagggaatactggtttgtgcatagtgaacgac
gagctgttcgtgcggaacgccacgacggaggagatccggcgagccttcgcagcccccgcg
ccgacgccctccagcagccccgtcccgacgctttcggcaccccatcaggaaatgctgtcc
gccttctcgctgaagtccggcatgaacctcgagtggtcgcaaaagtgtcttcaggacaac
gagtgggatttcaaccgagctgctcaaatcttcacacagctaaaggccatagggaagatc
ccagacgttgccttcttgaagtga
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