Anguilla anguilla (European eel): 118224199
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Entry
118224199 CDS
T07545
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118224199 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118224199 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118224199 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118224199 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118224199 (col4a2)
Exosome [BR:
aang04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118224199 (col4a2)
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118224199 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118224199
NCBI-ProteinID:
XP_035267358
LinkDB
All DBs
Position
3:17625995..17691421
Genome browser
AA seq
1684 aa
AA seq
DB search
MKSEVRMDGAMQVRRRIEFKSLRFSLNTLTTLCLIILVLLTTEVQAGGKKYNQPCGGRDC
SGGCKCFPEKGARGQPGPLGPQGGQGSPGRPGEPGVIGPKGEKGDRGRGGITGPKGSVGM
TGVPGFSGMDGIPGHPGQAGSRGKPGADGCNGTRGDDGTQGRTGLHGYAGHPGNPGRKGE
KGDSLKVSVFMERFRGEQGDRGFPGYTGPAGLPGLTGHQGRVGPQGPPGFPGPPGPKGTM
TKTLKGQKGEQGDAGEPGPPGNSTHPHTKTPSGLPGLKGEKGFQGERGDSADNWVIGEVG
VMGYPGQRGSPGLDGQPGEKGDAGEPGQGGRDGAKGERGEPGEFIPISPIPPAPPGPNGQ
PGPQGERGEPGEKGLPGTPGTPAYPTFGTRFNKGSFGPKGFKGSKGPDGDPGIPATVPGP
PGYDGYPGDPGAPGERGSWGNEFRGPKGEIGQPGAGGQQGQKGDEGLCQCDNVNSPPGPP
GPPGSPGIQGMSGEWGQQGDPGSPGPRGAPGLPGLQGQEGLPGPKGSKGRPMKATQKGFP
GDPGDPGTTGNQGESGQPGPIGSPGAPGLRGRPGEGPVGPPGEKGGPGRPGAPGRAGLMG
EPGVVLGAKGLPGLPGDAGYDGFDGSPGPPGVQGGCVLEGNGRREDGTGECDPVPGPAGK
PGLPGPIGLDGSQGTPGPKGFQGLFGEEGLKGEQGDPGRGGPMGHPGFVGPRGDRGSPGS
KGRQGSPGDLGRRGLDGEPGQKGSHGEVVGASTGPSGEPGPPGLQGAKGNIGDPGQPGYP
GMEGMPGILGSRGELGPPGLQGEEGRPGPPGKYGFPGLPGQTGPPGPPGSIGEPGPAGDR
GDDGDPGPPGPFGRKGIPGEPGSVGPKGNEGQQGNPGLPGRPGHAGLPGFKGSRGSTGMT
GFEGMPGVKGKLGIAGQKGEQGFSGTPGYKGAMGKKGVKGDRGLQGPPGEKPYIPPYMIK
EMKGTKGDHGKSGNGGFVGPRGSKGYPGEPGGTGTDGMPGEPSDEKGAKGNFGAEGLPGH
KGMPGLPGQPGIQGFPGMTGHRGEKGTPGAYGRSGEDGVKGRKGEGGPIINLPGPTGERG
GPGFPGQLGVKGFNGLLGERGSSGFNGIDGLKGEKGQPGTEGSAGSDGKNGSPGHHGHKG
WPGTPGEPGFGGHPGLPGQRGFPGLKGIFGLDGLKGQKGIPGVPGSDNEGLAGDPGTKGE
KGEAGIPNTERGLPGLLGSKGSRGDSGDQGEPGPPGFQGPPGIHGISDIQGAQGDPGFPG
AKGHQGFPGFQGRPGVPSTSGSKGDRGQPGPFGERGSIGTQGDQGQQGFPGRNGLSGNKG
ATGEQGLMGTPGRPGFKGDKGPVGPKGNTGFPGFPGVPGDQGPVPTPPKQPGERGPPGAH
GIRGPEGHRGEFGPQGPPGDPGFMGPQGQKGMPGVSGTPGTPGYRGDVGQGGHQGLQGLQ
GSPGHPGAPGITGMPGRSVSVGYLLVKHSQSDQTPMCPVGMAKLWDGYSLLYFEGQEKAH
NQDLGLAGSCLPRFNTMPFLYCNPGDICYYASRNDKSYWLSTTAPIPMMPVEETEIKPYI
SRCSVCEAPSVAIAVHSQDTTIPQCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCL
EDFRTTPFIECNGAKGACHYFANKQSFWLTSIEHSFQSRPAAETLKAGQQLSRISRCQVC
MKNL
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgaagtacggatggacggggccatgcaggttcgacgcaggatagaatttaaa
agtttaaggttttcgcttaacacgctgacaactttgtgcctaataatcctcgttcttctg
acgaccgaagttcaagccggtggaaagaagtacaaccagccatgcggagggagggactgc
agcggagggtgcaagtgcttcccggagaagggcgcccggggacagccagggcccctagga
ccacagggaggccagggatccccaggacgaccgggtgagcctggtgtgatcgggcccaag
ggagagaagggggaccgtggacgtggcggcatcacagggccaaaaggatccgtgggaatg
accggagttcctgggttttctgggatggacgggattcccggtcaccctggacaggcagga
tctcgtgggaaaccaggtgctgatggctgcaatggaacacgaggagacgacggaacgcag
ggcagaacaggcctacatggctatgcaggtcatcctggtaaccctggcagaaagggtgag
aaaggtgactctttgaaagtcagcgtgttcatggaaagatttcggggagaacagggtgat
cgtggctttccaggatatacaggccctgctggtttacctggtttgacaggacatcagggc
cgtgttgggccacaggggccccctggatttcctggccctccagggccaaagggcacaatg
actaaaacgttgaaggggcagaaaggtgaacagggcgatgccggagagccaggccccccc
gggaactccacccacccccacaccaagaccccctcggggctaccggggctgaaaggggaa
aagggtttccaaggtgaaaggggagattcggccgacaactgggtgatcggagaagtgggt
gtgatgggatatccagggcaaagggggagccctggtttagatgggcagccaggagagaag
ggagatgctggggaaccagggcaaggtggaagagatggagccaagggtgaaagaggagag
ccaggagaattcattccgatcagtccaattccaccggcgccccctggtcctaatggacag
cccggcccccagggggagaggggggaacctggggagaagggactccctggaaccccagga
acgcctgcctatcctactttcggaactaggttcaataagggctcatttggcccaaagggg
ttcaaagggagcaagggtcctgacggtgacccagggatacctgccacggtgcctggtccc
cctggttacgatggatatccaggagaccctggggccccaggagagaggggatcttgggga
aacgagttcagaggtccgaaaggtgaaatagggcagccaggtgctggtggacagcagggt
cagaaaggtgatgaaggcctgtgccagtgcgacaatgtgaactccccacctggccctcct
ggacctccaggtagcccgggaatccaaggcatgtcgggcgagtggggccagcaaggcgac
ccaggcagtcctggcccacgcggggctcctggactgcctggtctccaaggccaggagggt
ctaccaggtccaaaggggagtaaaggaagaccaatgaaagccactcagaaaggatttcct
ggagatccaggggacccaggtacaacaggaaaccagggtgaaagtggtcaacctgggcct
ataggatctcctggagcccctggactgcgtggtcgacctggtgaaggtccagtgggacct
cctggagaaaagggtggtcctggccgcccgggggcacctgggagagctggactgatgggc
gaaccaggtgtggtccttggagcaaaaggacttccaggtctcccgggagacgctggctac
gacggttttgatggaagccctggacccccaggtgttcaaggaggctgtgttctggaagga
aacgggaggcgggaggatggaacaggagagtgtgatccagtgccagggcctgctggtaaa
cctgggctacctggccctatcggtttggatggttcacaaggcacacctggacccaaaggt
tttcaaggactgtttggggaggaggggctcaaaggagaacagggtgatccaggcagaggt
ggaccaatggggcatccagggtttgtggggcctcgtggagataggggttcacccggcagc
aagggaaggcaggggtctcctggggacctgggaaggcggggcctggatggagaaccggga
cagaaagggtcccacggggaggttgtgggggcttccacaggaccttccggagagccaggg
ccccctggcctacaaggagctaaaggcaacattggagaccctggccagcctggataccca
gggatggagggcatgccaggaatccttggctccagaggagaactgggtcctccaggcctg
caaggggaagaagggaggccagggccgccaggaaagtatggcttcccgggattgccagga
cagacaggccccccaggtcctccagggtccattggagaaccaggccccgctggtgacaga
ggagacgacggtgatcctggcccaccaggcccttttggaaggaagggaatacctggtgag
ccaggtagcgtcggtccaaagggaaacgaggggcagcagggtaacccagggttaccagga
cgacctggccacgctggtcttcctggattcaaaggttccagaggctcaacagggatgaca
gggtttgaaggcatgccaggtgtcaagggaaaactaggaattgcaggacagaaaggagaa
caggggttttctggaaccccaggttacaaaggtgccatgggaaagaagggagtaaagggt
gacagagggctgcagggccctcctggtgaaaagccatacattcccccatacatgatcaaa
gagatgaaggggaccaagggcgaccacgggaaatcaggaaatggtggcttcgtaggtccc
agggggtctaagggatacccaggcgagccaggagggactggtactgatggtatgccggga
gagcccagcgatgagaagggtgccaagggaaactttggggcagaagggcttccagggcac
aaaggaatgcccggcctccctggacaaccgggaatccagggctttccgggaatgactggc
cacaggggagagaaaggaacacctggagcttacggccgctcaggggaagacggtgtgaag
ggacgcaaaggtgaaggcggccccatcatcaacttacctggacccacaggtgaaaggggg
ggccctggctttcctggacagttgggggtcaagggcttcaatgggctgctgggagagagg
ggcagctcaggcttcaatggcattgatggtctgaaaggagagaagggtcagcctggtact
gaaggctcggcagggtctgatgggaaaaatggttccccaggacaccatggccacaagggg
tggcctgggaccccaggagagccagggtttgggggtcatcctggcctcccagggcagaga
ggttttcctggtctgaagggcatatttggtctggatggtctaaaggggcagaaaggcatc
ccaggagtcccaggttcggataacgaaggactggcaggagaccctgggactaaaggggag
aaaggagaagcagggatccccaacacagagagaggattaccagggctgttgggttccaag
ggatctcgcggagactcaggtgatcaaggtgaacctggaccccctggatttcagggcccc
cctgggatacacgggatatctgacatacaaggcgcacagggtgaccccggtttcccaggg
gcaaaagggcatcaaggttttcctgggtttcaagggagaccaggtgtaccctcaaccagc
ggaagcaagggggatagaggacagccaggaccttttggggagaggggctcaataggtacc
caaggagatcagggacagcaaggattcccagggcggaacggactgtctgggaataaaggt
gcaacgggagagcaggggctgatgggaactcctggaaggcctggtttcaaaggagacaaa
ggacctgtcggtccaaaaggcaacactggatttccaggattccctggggtgcctggtgat
cagggcccagtacccaccccacctaaacagcctggggagaggggcccgcctggtgctcat
ggaatccgtggacccgaaggacatcgtggggagtttggcccccaagggccgcctggagac
ccaggcttcatgggtccccagggacagaagggcatgccaggagtcagtggcacacctgga
acaccaggttaccgtggagatgtcgggcagggtgggcaccaaggtctccagggccttcaa
gggagtccgggccaccccggtgcccctgggatcactggaatgccggggcgcagtgtgagc
gtggggtacctgctggtgaagcacagccagtcggaccaaacgcccatgtgtcccgtgggc
atggccaagctgtgggatgggtacagtctgctgtactttgagggtcaggagaaggctcac
aatcaggacctgggcctggctgggtcttgtcttcctcgtttcaataccatgcccttcctc
tactgcaaccccggggacatttgctactatgccagtcgcaatgacaaatcctattggctg
tccaccactgcccccattcccatgatgccagtggaggagacggagatcaaaccctacatc
agccgctgctccgtatgtgaggcgccatccgtggccattgcagtgcacagtcaggacact
acaatcccacaatgccctgcgggctggcgcagcttgtggattggctactctttcctcatg
cacacggctgccggagacgagggcggcgggcagtccttggtgtcacccggctcctgcttg
gaggacttccgcaccacgcccttcatcgagtgcaacggggccaaaggggcctgccactac
tttgccaataagcagagcttctggctcacctccatcgagcactccttccagagccggcca
gccgcagagacgctcaaggctggccagcagctgtcccgaatcagccgctgccaagtgtgc
atgaagaacctgtga
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integrated database retrieval system
