Anguilla anguilla (European eel): 118224586
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Entry
118224586 CDS
T07545
Symbol
smx5
Name
(RefSeq) smx5
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03018
RNA degradation
aang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118224586 (smx5)
09123 Folding, sorting and degradation
03018 RNA degradation
118224586 (smx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118224586 (smx5)
03041 Spliceosome [BR:
aang03041
]
118224586 (smx5)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118224586 (smx5)
mRNA degradation factors
5'-3' decay
Lsm complex
118224586 (smx5)
Spliceosome [BR:
aang03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
118224586 (smx5)
Complex C
U2 snRNP components
118224586 (smx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
118224586
NCBI-ProteinID:
XP_035268007
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All DBs
Position
4:12620929..12623483
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AA seq
130 aa
AA seq
DB search
MTHFITHLWEWSIYCPVLETKGKYRVIIRRGYRVNMLFYSFFKSLVGKDVVVELKNDLSI
CGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDA
ARKEAMQQKQ
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atgacgcattttataacccacctatgggagtggagtatttattgtcccgttctcgaaacg
aagggaaaatatcgcgttatcattcgacgcggttacagagtgaacatgctgttctactcg
ttcttcaagtcgttggtgggcaaagacgtggtagtggagttaaaaaatgacttgagtatc
tgtggcacacttcactcagtagaccagtacttgaatatcaaactgacggacatcagcgta
actgatccagagaagtatccgcatatgttgtcagtgaagaactgcttcatccgtggctct
gtggtgcggtatgtgcagctacctgctgatgaggtggacacccaactgctgcaggatgct
gcccgcaaggaggccatgcagcagaagcagtga
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integrated database retrieval system