Anguilla anguilla (European eel): 118224865
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Entry
118224865 CDS
T07545
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aang03000
]
118224865 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aang03310
]
118224865 (rorca)
Transcription factors [BR:
aang03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118224865 (rorca)
Nuclear receptors [BR:
aang03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118224865 (rorca)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118224865
NCBI-ProteinID:
XP_035268566
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Position
4:complement(7805898..7823110)
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AA seq
493 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQELPGALGAVGGVGLSR
DEGCDAGSHGRAYSQGSSAALSDLDDIVALPDGLLFDLPLTPEGAGGDYYCGLELLGGGC
GGGGGGGDSAGSGSSSSRSSPEQSGLDFGDAAHIKHEYQLLHAPALYVHPLLSAVPDGCS
LLEIERVTQSVVKSHLETSQHGTEDLKRLMWTMYSPEETRSFQSKSAECMWQQCAHHITN
AIQYVVEYAKRIAGFMDLCQNDQIILLKAGCLDVLLIRMSCAYNPVNDTLLFDGKFAGPQ
LFKSLGCDDLVSAVYDLAKSLSRLQLSEEEMALFSAAVLLSPDRPWLTDTQQVQKLQERV
YVALQHCLHRSGAPEEKLAKMVSKLPMMKSICKLHIDKLEFFRLLHPETAYSFPPLYREV
FGSEIAFPDSTEA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaattgaggtgatcccgtgtaagatctgcggggacaagtcttcaggaatc
cactatggcgtcatcacctgtgaagggtgcaagggcttcttcaggcgcagccagcagaac
aacgccatgtactcctgctcgcgtcagaggaactgcctgatcgaccgcaccaaccgcaac
cggtgccagcactgccggctgcagaagtgcctggcgctgggcatgagccgcgacgcggtg
aaatttggccgcatgtccaaaaagcagcgggacagcctgtacgccgaggtccagaagcac
cagcagtcccaggagctgccgggggcgctgggcgcggtgggcggcgtgggcctgtcccgg
gacgaggggtgcgacgcaggcagccacggccgggcctacagccagggctccagcgcggcg
ctgagcgacctggacgacatcgtggcgctgccggacgggctgctcttcgacctgccgctc
acgcccgagggcgccggcggcgactactactgcggcctggagctgctgggggggggctgc
ggcggcggcggcggcgggggggacagcgcgggcagcgggtcgtcctcgtcccggagctcg
ccggagcagagcggcctggacttcggcgacgcggcgcacatcaagcacgagtaccagctg
ctgcacgcgcccgcgctctacgtccacccgctcctcagcgccgtgcccgacggctgctcg
ctgctggaaatagagcgcgtcacgcagagcgtggtgaagtcccacctggagacgagtcag
cacggcaccgaggacctgaagaggctcatgtggaccatgtactcccccgaggagacccgc
tccttccagagcaagtctgcggagtgcatgtggcagcagtgcgcccatcacatcaccaac
gccatccagtacgtggtggagtacgccaagaggatcgccggcttcatggacctctgccag
aacgaccagataatcctcctgaaagcaggctgtctggacgtcctgctgattcgcatgtcg
tgcgcctacaaccccgtcaacgacactctgctgttcgacggcaagttcgccgggccccag
ctcttcaaatctctcggttgtgatgatctcgtgagcgcggtgtacgacctggccaagagc
ctgagccgcctgcagctgtctgaggaggagatggcgctgttcagcgcggctgtcctgctt
tccccagaccggccatggctgactgacactcagcaggtccagaagcttcaggagagggtc
tacgttgcattacagcactgtctccacaggagcggcgcccctgaggagaaactggccaag
atggtgtccaagctgcccatgatgaagtccatctgcaagctgcacatcgacaagctggag
tttttccgcctgctgcaccctgagacggcctacagcttcccccctctgtacagagaggtg
ttcggcagcgaaatcgcctttccggactccaccgaggcctaa
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