Anguilla anguilla (European eel): 118225774
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Entry
118225774 CDS
T07545
Symbol
vps39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04140
Autophagy - animal
aang04148
Efferocytosis
aang05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118225774 (vps39)
04148 Efferocytosis
118225774 (vps39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118225774 (vps39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aang04131
]
118225774 (vps39)
Membrane trafficking [BR:
aang04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
118225774 (vps39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
118225774
NCBI-ProteinID:
XP_035270570
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All DBs
Position
1:7832356..7856724
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AA seq
876 aa
AA seq
DB search
MHDAYEPVPILEKLPLQIDCLAAWEDWLLVGTKPGHLLLYRIKKDAASNRFEVTLEKSNK
NFSKKIQQLFVVSQYKILVSLLENNIHVHDLLTFQQITVVSKAKGASLFACDLQHGSSGE
AKLRMCVAVKKKLQLYYWKDREFHELQGDFAAPDIPKSMAWCENSICVGFKRDYYLIRMD
GRGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSVELQRPRFITSAGPNIVYVASNHFVWRLVPVSI
ATQNRQLLQDKQFELALQLAKMKDDSDGDKRQQIHHIQNLYAFDLFCQKRFDDSMQVFAK
LGTDPTHVIGLYPDLLPTDYRKQLHYPNPLPTLSGAELEKAHLALIDYLTQKRSHLVKQL
NDSDPSTTSPLMEGTPTIKSRKKLLQIIDTTLLKCYLHTNVALVSPLLRLENNHCHIEVS
EYVLKKAHKYSELIILYEKKGLHQKALQVLLDQSTKANSPLKGHERTVQYLQRLGMENLG
IIFEFSPWVLKICPEDGLKIFTEDLPEVETLPRQKVLSFLKEGFRELAVPYLEHIIYVWE
ETDPEFHNVLIQLYLEKVQGLMKEYLNSLPEGEPPVAAGKEEGELGEFRNKLLSFLEISS
SYEPARLISDFPFDGLLEERALLLGRMGKHEQALFIYVHVLKDTRMAEEYCHQHYDRETD
GSKDVYLSLLRMYLSPPDVHCLGPIKMELSEPQANLQAALQVLELHHSKLNTTKAINLLP
ANTQIQEIRVFLESVLEEKAQKKRFNQVLKSLLQAEFLRVQEERIFHQQVKCIITEEKTC
RVCKKKIGNSAFARYPNGVVVHYFCCKDRNTCPTEL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgcgtatgagccagtacctattttggagaagctgccgcttcagatcgactgc
ctagcggcctgggaggattggcttcttgtcgggaccaagccaggccatctactgctctac
cgcatcaagaaggatgcagcaagtaacaggtttgaagtgacactggagaaatccaacaag
aacttctccaagaaaattcagcagctgtttgttgtgtctcagtacaagatcctggtcagt
ctactggaaaacaacatccatgtccatgacctcctgaccttccagcagattactgtcgtg
tcaaaggccaaaggagcctccctctttgcatgtgacttgcagcatggcagctccggggag
gccaaactgaggatgtgtgtggccgtgaagaagaagctgcagctgtactactggaaggac
agggagttccatgagctgcagggggattttgctgcgccagacattcccaaatccatggcc
tggtgtgagaactccatctgtgtggggttcaaacgggactactacctgatccggatggat
gggcgtggctccatcaaagagctgttccctacggggaagcagctggagccgctggtcgcc
ccattggccgacgggaaagtggcagttggtcaggacgacctcaccgtggttctgaacgag
gaaggcgtctgcacccaaaagtgcgccctcaactggacggacatacctattgcaatggag
caccagcccccctacatcatcgccgtgcttccccgctacgtggagatccgcaccttcgaa
ccccggctcctggtgcagagcgtggagctccagaggcctcgtttcatcacctcagctggg
cccaatatcgtgtacgttgccagcaaccattttgtgtggcgccttgtgcccgtctccata
gcaacccagaaccggcagctcctgcaggacaaacagtttgaactggccctgcagctggcg
aagatgaaggacgactcagacggcgataagcggcagcagatccaccacatccagaacctg
tacgccttcgacctcttctgccagaaacgcttcgatgactccatgcaggtgttcgccaag
ctgggcacggaccctacccatgtgatcgggctgtatccagacctcctgcccacggactac
aggaagcagctgcactaccccaaccccctccccaccctgtccggcgctgagctggagaag
gcccacctggcactcatcgactacctgacgcagaaacgcagtcacctggtgaagcagctg
aacgactcggacccgtccaccacctccccgctcatggaggggacgcccaccatcaagagc
cgcaagaaactgctgcagatcatcgacaccacgctgctcaagtgctatctgcacactaat
gtggccctggtgtcgcccctcctgagactggagaataaccactgtcacattgaggtgagc
gagtacgtgctgaagaaggcccacaagtacagcgagctcatcatcctctacgagaagaag
gggctgcaccagaaagccctgcaggtgctgctggatcagtccaccaaggccaactccccg
ctgaagggtcacgagcgcacagtgcagtacctccagaggcttgggatggagaacctgggc
atcatcttcgagttctccccctgggtgctgaagatctgccctgaggacggactgaagatc
ttcacagaggacctgccggaggtggagacgctcccgaggcagaaggtgctgagcttcctg
aaggagggcttcagggagctggccgtgccgtacctggagcacatcatctacgtgtgggag
gagacggaccccgagttccacaacgtcctgatccagctctacctggagaaggtgcagggc
ctgatgaaggagtacctcaactctctccctgagggtgaacccccagtggctgctgggaag
gaggagggagagctgggggagttcaggaacaagctgctgagtttcctggagatctcttcc
agctacgagccagccagactcatcagtgacttccccttcgacgggctgctggaggagagg
gccttgctgttgggccggatggggaagcacgagcaggccctcttcatctacgtgcacgtg
ctgaaggacacccgcatggccgaggagtactgtcaccagcattacgacagggagacagat
ggcagtaaagatgtgtacctgtcgctgctgcgcatgtacctgtctcccccggacgtccac
tgcctggggcccattaagatggagctgtcggagccgcaggccaacctgcaggctgccctg
caggtgctggagctgcaccacagcaagctcaacaccaccaaggcgataaacctgctccca
gccaacactcaaatccaggagatccgggtgtttctggagagcgtgctggaggagaaggcc
cagaagaaacgcttcaatcaggtcctgaagagcctgctgcaggcagagttcctgagggtc
caggaggagcggatcttccaccagcaggtgaagtgcatcatcacggaggagaagacctgc
cgcgtgtgcaagaagaagatcgggaacagtgcgtttgccaggtaccccaacggcgtggta
gtgcattatttctgctgcaaggatcgcaatacgtgccccaccgaactgtga
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