Anguilla anguilla (European eel): 118226105
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Entry
118226105 CDS
T07545
Symbol
rc3h1a
Name
(RefSeq) roquin-1a isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aang03000
]
118226105 (rc3h1a)
04121 Ubiquitin system [BR:
aang04121
]
118226105 (rc3h1a)
Transcription factors [BR:
aang03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
118226105 (rc3h1a)
Ubiquitin system [BR:
aang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118226105 (rc3h1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-CCCH
zf-C3HC4
Prok-RING_4
zf-CCCH_4
zf-C3HC4_2
zf-CCCH_UNK
zf_CCCH_4
FYVE
zf-RING_10
NS3_helicase_C
Baculo_IE-1
zf-RING_6
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
118226105
NCBI-ProteinID:
XP_035271313
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All DBs
Position
4:54869446..54901778
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AA seq
1134 aa
AA seq
DB search
MPVQAPQWTEFLLCPICTQTFEETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IEQLPVNSALLQLVGGQVPKQQPLTLLTGAEDTKHYDEARKCVEELALYLKPLGSTRGEP
HCTGVGLSSAAQSMLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQ
NPQQLSSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRF
PQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEG
GLRIAPDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLR
PHLELLANIDPSPDAPPPTWEQLDKGLVAVKTVVHGLVDFIQNHSKKGSDQQQPPQHSKY
KTYMCRDMKQKGGCPRGASCTFAHSQEELDKYRKVNKRLAARRPLSQSLTQLKEVGLPCS
PGLQPEDDGGVEVMGRKPSSLTNGIVAAGSGSALSQLISRNTDPTYDPGRKPGKMDSVSL
SAPGSPPDSLDPKSVMAMNPHGMSHPRMADGLSMHKQMPVVPRVPQMYPQQQPELFYPEP
RPPASASQYESSQYPAGNPYPYQPSQYVQPRYIRNAPPPSEPGMPPYQDPYPGPYVQDRQ
YAAPQSGPQFSAMTQHVYPPHYDGRRHSPYAGPPPQSFQPRDEPVRMSPVPVDVPPPPPP
PAAGSPYLSESSRDRYPPEGYYPVGPHHSQMRSYARDPCRPQHSLDYLHRRRKEIMAQLE
ERKVISPPPFAPSPTLPHTFPTNYPQEQYMEENPQAFGKCREPDYAGQYSPWSCDTISSY
IGAKEVKSKDVMAGGAMEMMNVDSKGLREPAVDMQRRSAEAKDDDPIIPFGPLPTVSRFG
AISRTSKTGYQTTGPVQAMASSQGSATKHITVAADYMYGNHGSWGGASYPQHQNMTPQGH
LSERLPIPAQDREQLKMELQQVNQQINQQTHVRGMEAAGSALLLQRDAGALAAPPGPGEW
SAGNVSSEQLSLELHHVEREIGKRTREMAMENHAAHDVKYKLKAAENGQPDHKVQREDPI
ALSEGSNGSSGMLADGGGGSMASLSSKTSSLSLSSDLGPGGSDLQKNGVVHPCS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtacaagctccacaatggacggaattccttttgtgcccgatctgcacccaaacg
ttcgaggagaccatccgcaagcccatcagcctgggctgtggccacaccgtctgcaagatg
tgcctgaacaagctgcatcgcaaggcctgccccttcgaccagaccaccatcaacaccgac
atcgagcagctgcccgtcaactccgccctgctgcagctggttggtggacaggtgcccaag
cagcagcccctcaccctgctgacgggggcggaagacaccaagcactacgatgaggcccgc
aagtgcgtggaggagctggctctttacctcaaacctctcggcagcaccagaggtgagccg
cactgcaccggggtgggtctgagcagcgcggcccagagcatgctgagccggcccatgcag
cggaagctggtgacgctggtgcactgccagctggtggaggaggagggccgcatccgggcc
atgcgggcggcccgctccctgggcgagcgcaccgtcaccgagctcatcctccagcaccag
aacccccagcagctgtcctccaacctgtgggccgccgtgcgcgcccgcggctgccagttc
ctgggccctgctatgcaggaagaggccctgaagctggttctgctcgccctggaggacggc
tcggccctgtcccggaaagttctggttctgtttgtggtgcagaggctggagccccgcttc
ccccaggcctccaaaaccagcatcggacacgtggtgcagctcctctaccgggcctcctgc
ttcaaggtgacgaagcgcgacgaggactcgtccctgatgcagctgaaggaggagttccgc
acgtacgaggccctgcggcgggagcacgactcgcagatcgtgcagatcgccatggagggc
ggcctgcgcatcgcgcccgaccagtggtcctccctgctgtacggcgaccagtcccacaag
tcccacatgcagtccatcatcgacaagctgcagacgccggcgtccttcgcccagagcgtg
caggagctgaccatcgccctgcagcggaccggggacccagccaacctcaacaggctgaga
ccgcacctggagctgctggccaacatcgaccccagtccagatgctccgccccccacctgg
gagcagctggataagggcttggtggcggtaaagacggtggtccacggcctggtggacttc
atccagaaccacagcaagaagggaagcgaccagcagcagcctccccagcacagcaagtac
aagacctacatgtgccgggacatgaagcagaagggcggctgcccccgcggggccagctgc
accttcgcccactcccaggaggagctcgacaagtaccgaaaagtgaacaagcgcctggcg
gcccgccggcccctcagccaatccctgacccagctgaaggaggtggggctcccctgctcg
ccgggcctgcagcccgaggacgacggcggcgtggaggtgatgggccgcaagccctcgtcc
ctgaccaacggcatcgtggcggcggggtccgggtcggcgctgtcgcagctcatctcccgc
aacaccgaccccacctacgacccggggcgcaagcccggcaagatggactccgtcagcctg
agcgcgccagggtctcccccggactctttggaccccaagtctgtgatggccatgaacccc
cacggcatgtcccaccccaggatggcggacggcctttccatgcacaagcagatgcccgtg
gtgcccagggtgccccagatgtacccccaacagcagcctgaactgttctacccggagccc
aggcccccggcctccgcgtcgcagtatgagagctcccagtaccccgcgggtaacccgtac
ccctaccagccctcgcagtacgtccagccgcgctacatccgtaacgcccctccccccagc
gagccgggcatgcccccgtaccaggacccgtaccccggcccctacgttcaggaccggcag
tacgccgcccctcagtccggcccccagttctccgccatgacccagcacgtgtacccccct
cactacgacggtcgccgccactccccctacgccggcccgccgccccagtccttccagccg
cgggacgagccggtcaggatgagccccgtgcccgtggacgtcccgcccccgcccccgccc
ccggccgccggctccccgtacctgtccgagtcctctcgggaccggtaccccccagaaggc
tactaccctgtgggcccccaccacagccagatgaggtcatatgcccgggacccctgtcgc
ccccagcacagtctggattacctgcaccgccggcgcaaggagatcatggcccagctggag
gagaggaaggtcatctctcccccgcccttcgccccctcgcctaccctgccccacactttc
cccaccaactacccgcaagagcagtacatggaagagaaccctcaagccttcgggaagtgt
cgggagccggactacgctggccagtactccccctggtcatgtgacaccatcagttcctac
attggggccaaggaagtcaagtccaaagacgtcatggcaggtggtgccatggagatgatg
aatgtagacagcaaaggcttacgggagccggccgtggacatgcagcgcaggtcggccgag
gccaaagacgacgaccccatcatccccttcgggcccctgcccaccgtgtcccgcttcggg
gccatttcccgcacctccaagaccggctaccaaaccaccgggccggtccaggccatggcc
tcttcccagggatctgccaccaaacacatcactgtagcagctgattacatgtacgggaat
cacggaagctggggcggggcctcctaccctcagcaccaaaacatgacgcctcagggacat
ttgagcgagcgtctgcccatcccagcccaggacagggagcagctgaagatggaactccag
caggtgaaccagcagatcaaccaacagacccacgtccgcggcatggaggccgccggcagc
gccttgctgctgcagagggacgccggcgccctggccgcccccccggggcccggcgagtgg
tccgcgggaaacgtctccagcgagcagctgagcctggagctgcaccacgtggagagggag
atcggcaagaggacccgcgagatggccatggagaatcacgcagcccacgatgtgaaatac
aagctgaaggctgcggagaacgggcagccggaccacaaagtccagcgagaggaccccata
gcgctcagtgagggctcgaacggttccagcggcatgttggcggacggcggcggcggcagc
atggcgtctctgtccagcaagacgtcctccctcagcctgtcctccgacctggggcccggc
ggctcggacctgcagaagaacggggtggtgcacccctgctcctga
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