Anguilla anguilla (European eel): 118227788
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Entry
118227788 CDS
T07545
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03030
DNA replication
aang03410
Base excision repair
aang03420
Nucleotide excision repair
aang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118227788 (rfc1)
03410 Base excision repair
118227788 (rfc1)
03420 Nucleotide excision repair
118227788 (rfc1)
03430 Mismatch repair
118227788 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aang03032
]
118227788 (rfc1)
03400 DNA repair and recombination proteins [BR:
aang03400
]
118227788 (rfc1)
DNA replication proteins [BR:
aang03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118227788 (rfc1)
DNA repair and recombination proteins [BR:
aang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118227788 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_30
AAA_22
AAA_5
BRCT_2
Rad17
AAA_16
AAA_7
nSTAND3
AAA_17
AAA_14
Nexin_C
RuvB_N
AAA_19
AAA_33
AAA_18
NTPase_1
Motif
Other DBs
NCBI-GeneID:
118227788
NCBI-ProteinID:
XP_035274563
LinkDB
All DBs
Position
5:8752411..8764594
Genome browser
AA seq
1194 aa
AA seq
DB search
MDIRNFFAPCKPAAPKPPKNGSTSVDEDFKKKKKKSGSKGESSPKAEKSSAKRKKRAVID
SDSEEEKPGKKAPKPPKEPEKPLKRAAPVKKDPVRYVSETDSEDDTFVSLKKPSKPRENG
LSSLKGVGQGKGRPPAVKSPPKPSSAPGKAAVKSPVTPTTPKSTPPQPKHTPISVLDYFG
GSSSIQPQPKHTPISVLDYFGGSSIQRSEKKLVASTKRKADHDDSQSDEAIAMQLQMDED
MELEKQLHEDEEFARTLAMLDEAPQPKKARRDSGEKLGSTSSPTKSSAAPAQKSGSSHTA
SSSHSQPNGKAPHSQQGPGPSAKAARSPLKTSSKLALMKKRDDEEGARKKKEAPRATLVI
SPKKEAPRATLVISPKKEAPASSSSQRPGINAVTTPKMEKISPKKPESVSPEDSEKKRGN
SQAYRNYLNREGPRALGSKEIPEGAENCLEGLTFVVTGVLESMERDDAKSLIERYGGKVT
GNVSRKTSYLVLGRDSGASKTEKAEGFGTKIINEDGLLDLIRTKPGKKSKYEIAAEAENK
SSKTRTPEPQQSRARRTPQKSASKTRATPTKKTPTKATAATPPGRPSPRGSRKGLSFGRG
AAPSSSSSSSQSATASGGEAASLLWVDKYKPRALKGLIGQQGEQSCANKLLRWLQNWHRH
HTGDKKPAARFGKFGGKDDGSGFKAALLSGPPGVGKTTTAALVCEVVGYSYVEMNASCTR
SKNSLKEVVAESLNNTSIKDFYTGSSQTVSSKHVLIMDEVDGMAGNEDRGGIQEMISLIK
QTKIPIIFMCNDRNHQKIRSLANYCFDLRFQRPRVEQIKGAMMSIAFKEGLKVPPPALNE
IILASNQDIRQVLHNLSMWSVKDKVMTYDQAKADAKNARKDMKLGPFDVCRKVFTSGEET
AHMSLIDKSDLFFHDYSLAPLFVQENYVHVRPAAAGGNLKSHLVLLSKTADSICDGDLVD
RQIRSRQTWSLLPTQAVYASVLPGELMRGYMSQFPTFPSWLGKFSSTGKHNRIIQELASH
MSLRTHCSKQAVNLDYLPYLRSALLHPLERRGSEGAPQAVQLMDDYDLVKEDVDNIMEIS
TWAGRPEPYSKLDPKVKAAFTRAYNKEAHLTPYSLQAVKKGKRGGAEPELGVEGAEQEAQ
EPEEEEEEEEGVASDAMIKKKKAKASKDTKQVKVEDSGKGKGKGKGKGKGSAKK
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaattttttcgcaccttgtaaaccagctgcaccaaaaccgcccaagaat
ggcagcaccagcgtcgatgaagattttaagaaaaagaaaaagaagtctggctccaagggt
gaatcgagcccaaaggctgagaagtcttcggcaaaacgaaagaagcgtgctgtcatagac
tcggactcggaggaggaaaagcccggcaagaaggccccgaaacctcccaaggagcccgag
aagcccctgaaacgtgcagcgccggtgaaaaaggacccggttcgctatgtctctgaaacg
gattcagaggacgacactttcgtgtccctgaagaagccctccaaaccccgggagaacggg
ctctcctcattgaagggggtggggcaggggaaaggcaggccccctgccgtcaaatctccc
ccgaagccctcgtctgctccgggcaaggccgcggtcaagtcgcccgtcacacccaccacc
cccaaatcgaccccgccccaaccgaagcacaccccaatctcggttctagactactttggc
ggcagcagcagcatccagccccaaccaaagcacaccccaatctcggttctagactacttt
ggcggcagcagcatccagcggtcagagaagaagctggtggccagcaccaagaggaaagct
gaccacgacgactcccagagcgacgaggccatcgccatgcagctgcagatggacgaggac
atggagctggagaagcagctgcatgaggatgaggagttcgctcggacgctggccatgctg
gacgaggccccgcagcccaaaaaggctcgcagggactcaggggagaagcttggctccacg
tcctcacccaccaagagcagtgctgccccagcccagaagagcggctcctcacatacagcc
tccagctcccactcacagcccaacggcaaagcccctcacagccagcagggcccgggtcca
tccgccaaggccgcccgctcgccgctgaagaccagctccaaactggccttgatgaagaag
agggacgatgaagagggagcgaggaagaagaaggaggcgcccagggccacgctcgtcatc
tcgcccaagaaggaggcgcccagggccacgctcgtcatctcgcccaagaaggaggcgccg
gcctcctccagctcacagagaccaggcatcaacgcagtgaccacacccaagatggagaag
atctcccccaagaaaccagagagcgtgagccccgaggactctgagaagaagcgtgggaac
tctcaggcgtatcgcaactacctgaacagggagggccctcgagctctggggtccaaggaa
atcccggagggggcggagaactgcctggagggcctgacctttgtggtgacgggcgtgctg
gagtccatggagcgggacgacgccaagtctctgatcgagcgctacggcggcaaggtgacc
ggcaacgtcagccgcaagaccagctacctggtgctgggccgagacagcggcgcctccaag
accgagaaggctgaaggatttggcaccaagatcatcaatgaggacggtctgctggatctc
atacggaccaaacccgggaagaagtccaagtacgagatcgcagccgaggcggagaacaag
agctccaagaccaggacccctgagcctcagcagtccagggcgaggcgcacccctcaaaag
tccgcctccaaaacacgagccacgcccaccaagaagaccccgaccaaggccaccgcggct
acgccccctgggaggccgtctccgcggggcagccggaaggggctgtccttcggccggggg
gcggccccctcttcctcctcctcttcctcgcagtcggccacggcgagcggcggggaggcg
gccagtctgctgtgggtggacaagtacaagccgcgcgcgctgaagggcctcatcggccag
cagggggagcagagctgcgcaaacaagctgctccgctggctgcagaactggcaccggcat
cacacgggtgacaagaagcctgcagcgaggttcgggaagttcggcgggaaggacgacggc
tccgggttcaaggcggcgctgctgtcgggaccccccggtgtgggcaagaccaccactgcc
gccctcgtctgtgaggtggtgggctacagctatgtggagatgaacgccagctgcaccagg
agtaagaacagcctgaaggaggtggtagcagagtccctcaacaacactagcataaaggac
ttctacacaggatcttctcagaccgtcagcagcaagcacgtgctcattatggatgaggtg
gacggtatggctggcaatgaagaccggggagggatccaggaaatgattagcctgattaag
cagaccaagatccccatcatcttcatgtgcaatgaccgcaaccaccagaagatccgctct
ctggccaactactgcttcgacctacgcttccagagacctcgcgttgagcaaatcaagggc
gccatgatgtccatcgctttcaaggagggcctgaaggtcccgcctcccgctctcaatgaa
atcatcctggcgtccaatcaggacatcagacaggtgctgcacaacctgagcatgtggtcc
gtaaaagacaaggtcatgacctacgaccaggccaaggctgatgccaaaaacgccaggaag
gacatgaagctgggtcctttcgatgtgtgccggaaggtgttcaccagtggagaggagacg
gcgcacatgtcgctgattgacaagtcggacctgttcttccacgactactctctggcgccc
ctctttgtccaggagaactacgtgcacgtgcggccggccgcggcgggggggaatctgaag
agccacctggtgctgctgagcaagaccgcggacagcatctgcgacggagacctggtggac
cgacagatccgctcccgtcagacctggtcactgctgcccacacaggcggtctacgccagc
gtgctcccgggggagctcatgaggggttatatgagtcagttccccaccttccccagctgg
ctgggaaagttctcctccacaggcaaacacaaccgcatcatccaggagctggcctctcac
atgagcctgcgaacccactgcagtaagcaggcggtgaacctggactacctgccctacctg
cggtcggccctgctgcaccccctggagaggcgggggtccgagggggccccccaggccgtc
cagctcatggacgactacgacctcgtaaaggaggacgtggacaacatcatggagatcagc
acctgggcggggcggcccgaaccctactccaaactggaccccaaggtcaaagcggccttc
acgcgggcgtacaacaaggaggcgcacctgacgccgtactccctgcaggctgtgaagaag
ggcaagcgtggaggcgccgagccggagctgggggtggagggggcggagcaggaggcgcag
gaaccggaggaggaagaggaggaggaggagggcgtggcctccgacgctatgatcaagaag
aagaaggcaaaagcctccaaggacaccaagcaggtaaaagtggaggattctgggaagggc
aagggcaaaggaaagggaaagggcaagggaagtgccaaaaagtga
DBGET
integrated database retrieval system
