Anguilla anguilla (European eel): 118227820
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Entry
118227820 CDS
T07545
Symbol
alms1
Name
(RefSeq) Alstrom syndrome protein 1 isoform X1
KO
K16741
alstrom syndrome protein 1
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aang03036
]
118227820 (alms1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aang03037
]
118227820 (alms1)
Chromosome and associated proteins [BR:
aang03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
118227820 (alms1)
Cilium and associated proteins [BR:
aang03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118227820 (alms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
118227820
NCBI-ProteinID:
XP_035274650
LinkDB
All DBs
Position
5:14109280..14130865
Genome browser
AA seq
2581 aa
AA seq
DB search
METVEVQDEEAVIRPIVTTPPISRQSRADELRSVSSSPGSGTHISSSTSAVSLGEAIAHR
AKQGVESWGQLPMEEDASQLTMASVSRLGQTSSWPEEVHIHHDPIQERLVTVAEDATVQR
HEGRTCSFTLEFQDSRLSPALPLLPDKSGKLHSLAEDTLFHQTDLEFVALRGSPDISVAS
ERFPMPHQVSDASQICSSKVSKDLPADQSVLLQEHLGLTVASVEEVSCCSLSQHTLSPFS
EDGEQDVEHIHGILEEMQVEREPCYGVSDQPTDNSDGKDQSSLDTRPQEKPMKKMSQVSS
SFRSGDITVPLLRELPQRNANLSSSSSVVSSASATSMNKGSSSRGSTGYKAVKPEAAPSP
RLKEVTEQKTSVLKEVVGLKVDHSRSSLEWEPSAEQREGPLGVASCSSPTQVKTSRGTAA
LDTSGRSEVSNITTRASRTQQDDDSDALREQLCAEIERARQSESRPKAQEADSPQAPGQP
KPPSSQSATPNTCSLGTHSGRGSTIIEVPTDFDKTEGRLSPGFSFERGHTERELSSSGNQ
MAVDGSFLGTFSHPVSQSTPGVFSGPPRASVQPPIGKLSPIESNLEVSQPSSSRAVQSSS
SKPFLAPTFDISVRNPSGLDTGMGTFQDASLRSTGKIQSLPSLNFMEKVGAWNMTQTSGT
TYFDNLALRGFTGVSPKKKAFDAISDSLNRMLSQEGGSKQFVAASAPGPSIHSPRRNLAA
SFSGTTAFGSDSRGGSFVASPLDRPGNQPTLCADTGEIQPREKPGNDLASPESLCLSGMP
KMDPPQREPGQNEQDTGQQLDRTEPAGQQGVVTDKDQSGAGRGSAEELQSTAQLTTRLGL
DRFSDVSSNRDLSNTLTCSQDSYHVERRLAASIGAVSSVGSLEVDNYVPYWTPSPPSPAK
DAELNIEARIPMYLHNLGIDQSPSAILTPFVPRGPIREPEFSPTDLCTLKGSTGTPTKST
QPSEAGSPAKGEFSRCSLLSVGSSVSISLSVDSLQPKMPLSQHAKDRPLNERCLQTAFHP
LGPLPQGSPQPPGPDTGHNLSDSADDPTAVRVRELIEKFQSGKVFVTPDSLPSTEARQQQ
ARDSPLEAKPSETSDSSMDPGADSFVGSKTLQEIRKLLGRAESIVSGKSSVSSSPPSLQD
SDDSLLCLKRKLEGFQDSFASSTGNQEMPSSLLWGRSSSESALTSDGMKERASGELGRSP
RASGHNFAQGKGVLLRSLDSISNQAAESFPTKSVRRSEPEGCSATAPDRAAPVFVSIMQV
NPPTPSGVVQQGPAQEVMSPTESSVSGPAENMQAPSLREAERAVESDSSSADTLTTRVAA
LLRNESPATMASSSCSTADEEERKAREWIKLKVTGQQCEKLQLNVEDRQRIEEIKRDLLH
NTKRMTKSQLSTDTDSSTHSGAPWGQPPSHAGQFDALKSAEHQLSHQLQRLNHYAFDSSV
QLHPPVRQDPEARVRDVAQRTSPPPITSITIASCRCTPSPAPPRSPTPTPLSLAHLATDG
VPMPATGVRTSESREPAFQTKEDTAVRISPEAESAGGTMSVAHVRGSPTDLVPASGPGPD
HSESPSPLEAVTQSKTETLGTRYSTSYGLDTSSTAGEGSRTGGGRSRSPFHLNPTSYRQV
SRSDPNMSSTSSLEPAAAPLHNSTFASGSCAILSPTKKVLSHVHLTLSPKLPKGKSEESA
VEPPVRQDWVSERRAGGTESTAGLPPDFSTRLTSRNLPEFSAREQLFPDGRPPVDRSSYF
PAPRVTGWTDARQEPRSTPLLLDGASSQGVPIRPIGRENRETADASVQITTQEVPWRAEP
VTSFPQSFTAQPRVPGLSEPLAIHTPAVPVLLPYKPHGSPELFYIPKSEAPLSDTTVESS
HPGSDDAVPPRFSSEVLGSRDREAGAAVSGRHAEGIYSKRPAAYRARPGHGGLRMDTVGG
LQTNEVRQSGRPYPLSVRTGDSGDPPRSSEAWPNVRGVDPPSRGQEEVEFVPLQGEETYS
TEDLRSYSRSVREPRPLGGSDREGPAHNWRDFATRGVSSQSSGGNLNELWQRFNERRSQR
ESGPPGEGETPLLDRLERLSRLIHSSRNATPLGGREASAPGKRREERRRKQGEKEEKRRE
EEEQREADRRRGNGEQRSVREAWAEPGAEQEEESLSSSTLTEGSFGRHRCPAEKDGSASR
SGDTDASDSASTASTIDTARLIRAFGRGRVQANPGLNRLYSAIGRQREGTEQRRGRKRGG
PKPPAPPPAPSETNSTDSSTLSTVAPGESVSSDGDLPRAPPDVLVAKKAVKLVNKGVQAG
DVEIVVNGTRKHTRDVGTVFPSPIPAREAGRSANGSRGGQGEERSPPKTQSFMNEKRSRK
AQIERYPQGVSWFVPADSLKGNAKENQPGPGALPGRGQVWFEPYTKTKPWREPLRERQIQ
EEPVSIKRRSPGQPIGSAETDTDSKAPPALARVTLQEALEMRRPDFLSRSRERVKRLELQ
VEERRLQAVFQQEREQLFNRPGGRGQLSQPADFSAHRKRVVPRKEMFKRSKQLSNHEKKE
LRSDKVASQRKAMRIYSQLPEVQQRIEEEKRKAEYRSYRLNAQLYKKKITNRILGRKTPW
Q
NT seq
7746 nt
NT seq
+upstream
nt +downstream
nt
atggagactgttgaagtacaagatgaggaggctgtcattagaccaatcgtcacaacacca
cccatctcccgacagagcagagcagacgagctacggagcgtgagcagtagccctgggagc
ggaactcacatctcctccagcaccagcgccgtttctctgggggaggcaatcgcgcaccgg
gccaaacagggggtggagtcatgggggcagctgcctatggaagaggatgcgagtcagctg
accatggcttcagtgagcagattgggccagacatcatcctggccagaagaggtccacatc
caccatgacccaatccaagagaggctggtcactgttgctgaagacgccacagtacaacga
catgaaggaagaacctgctctttcacgcttgaatttcaggatagccgtctttcgcccgct
ctgcctttattgcctgacaaatctggaaaactgcacagccttgcagaagacacccttttt
catcagactgatttagagtttgtcgctctcaggggatctccagatatttctgttgcgtca
gaaaggtttcccatgccacaccaggtcagcgatgcctctcaaatttgctcctccaaggtg
tccaaagacctgcctgctgaccagtctgtgctccttcaggaacatttgggtcttacagtg
gcttcagtggaagaggtcagctgctgctccctctctcagcacactctgtcccctttctct
gaagatggggaacaggatgtggagcacattcatgggatcctggaggaaatgcaggtggaa
agggaaccatgctatggagtgtcagaccaacccaccgataattctgatgggaaggatcaa
agctctctcgacactaggccccaagagaaacccatgaagaaaatgtcccaagtcagcagc
tcctttcgaagtggagacatcactgtgcctctattacgtgagctcccccagaggaacgct
aacttgtcgagcagcagcagtgtagtgtcctctgcctctgcgacctccatgaacaagggg
tcttcctcaagaggttccactggttataaagcagtcaagccagaagcagctccatctccc
agattgaaagaagtgactgaacagaaaacatcagtgctgaaggaagtggttggactaaaa
gtggatcactccagaagctctttagaatgggaaccctcagctgagcaaagagaaggacca
ctgggggtagcctcttgctcatctccgacacaggtgaaaacatccagaggtacagcagct
ttagacacgtctgggaggtccgaggtatccaacatcaccactcgggcttcccgcacccag
caagatgatgattctgatgcactccgtgagcagctttgtgctgaaattgagagggctcgt
cagtctgagtctaggcccaaagcccaagaggctgatagtccccaagcacctggtcagccc
aagcccccgagcagtcagtcagccaccccaaacacatgttccttaggaacacacagtgga
aggggtagtaccatcatagaggtacccacagactttgacaagaccgagggacggttgtca
ccaggtttcagctttgaaagagggcatacagagagagagctctcatcctccgggaatcag
atggccgtggatggatctttcctggggactttctcccatcccgtttcccagtccacccca
ggtgtgttctcagggccacccagagccagtgtgcagccacccatcggcaagctgtctccc
attgagtccaacctcgaggtgtctcagccatcctcctccagggcagtccaaagcagctcc
tcaaaaccgtttcttgctcccacgtttgacatcagtgtcagaaacccaagtggacttgat
actgggatgggaacttttcaggatgcatcactcaggagcactggaaagatacaatcccta
ccaagtctgaacttcatggagaaagtcggggcctggaatatgactcagacatcagggacg
acatattttgacaacttagctcttcgcggtttcactggagtctcgcctaagaagaaggcc
tttgatgccatctccgactcacttaaccgcatgctgtcccaggaggggggcagcaaacag
tttgtggcagcatctgcaccgggccccagcatccacagtccaaggaggaacctggctgcc
tccttctctggaacaacggcatttggatcagattctagaggtgggagctttgtagcatcc
cctctggacaggcctgggaaccagccaaccctttgtgcggatactggggaaattcaaccg
agggagaaaccaggcaatgacctggcaagccctgaatccttgtgcctctcaggaatgccc
aagatggaccctccacaaagggagcctggacagaatgagcaagacactggccaacagtta
gatcgcacagagccagccggtcaacagggggtagtgactgacaaagatcagagcggtgct
gggagaggaagtgccgaggagctgcaaagtacagctcaactaacaactcgccttggcttg
gaccgattcagcgacgtctcctcaaatagagacctcagcaacactctgacctgttctcag
gatagctaccatgttgaacgaaggctggcagcctccatcggggcagtgtcctctgtgggc
agtctagaagtggacaactacgtcccctactggactcccagtcctccatcacctgcaaag
gatgcagagctaaatattgaggcaagaattccgatgtacctccataaccttggcattgac
cagtccccatcagctatccttactccttttgtaccaagaggacccatcagagaaccggaa
ttctccccaactgatctttgcacattgaaaggttccacagggacaccaacaaaaagcaca
cagccatctgaggcaggcagtcctgccaaaggagagttctcgagatgcagcctcctgtct
gttggctcgagtgtgtctatctcgctgagtgtagacagcctccagcccaaaatgcccctc
tcccaacacgccaaagacagacctctaaatgagcgctgcctgcagaccgccttccaccct
ctgggccccctcccacagggctcgccacagccccctggcccggatactggccacaacctg
agcgacagcgctgacgacccgaccgctgtgcgagtacgggagctaatcgagaagttccag
tccgggaaagtgtttgttacgcctgacagcctgccttcaacagaagccagacagcagcaa
gccagggactcccctctggaggccaaacccagtgagacttcggacagcagcatggatcct
ggtgccgactccttcgtggggtcaaaaaccctgcaggagatacggaaactcctgggcagg
gcagaaagcatcgtgtcagggaagtcctccgtctcatcctctcctccttcgctgcaggac
tccgatgattcccttctctgtctaaaaaggaagctggagggcttccaggactctttcgcc
tcctctacgggaaaccaggagatgccctcctccctcctgtggggcaggtcctcctcagag
tctgcactgacttcagacgggatgaaagaacgcgcctctggcgagctcggcaggtctcct
cgagcgtccggtcacaactttgcgcaaggcaaaggtgtgcttctgaggtccttggacagc
atttcgaaccaggcggctgagtctttcccaactaagtcagtgaggcgatccgagcctgaa
gggtgcagtgcgaccgctcctgaccgagctgctccagtgtttgtttcaataatgcaggta
aacccaccgactcccagtggagttgtgcagcagggtccggcacaggaagtgatgtcacca
acagagagctcggtgagcggcccagcagagaatatgcaggcccccagccttagggaggct
gagagagcagtggagagtgacagcagcagtgcggacacactgacaacaagagtggccgcc
ctgctaaggaatgagtcaccagcaaccatggcatcaagtagctgcagcactgcagatgag
gaggaacgcaaagcacgggagtggatcaagttgaaggtcactgggcagcagtgtgaaaag
ctgcagctgaatgtggaggacaggcagcgcattgaagagatcaagagagatctccttcat
aacaccaaacgcatgacaaagagccagctgagcaccgacaccgattccagcacgcactct
ggcgccccctgggggcagcccccttcccacgcgggccagttcgacgccctgaagtcagca
gagcaccagctgtcccaccagctgcagcggctcaaccactacgccttcgactccagcgtg
cagctgcaccctcccgtgcgccaggacccggaggcacgggtccgagacgtggcccagagg
accagccccccgccaatcacgtccatcaccatcgcctcctgccgctgcaccccgtccccc
gcccctccacgcagccccacgcccacgcccctcagtctggctcacctcgccacagatggt
gttcccatgccggccaccggggtgcgcacctcggagagccgggaacctgcttttcagacc
aaggaggatacagcggttcggatttctccggaagcagagtcggctggtggaacgatgagc
gtcgctcacgttcgcggttctcccactgatctcgttcctgcgtcgggaccgggacctgac
cactccgagtctccttctcctttagaagcggtaacccagtcaaaaacggaaaccctcggg
acacggtactctacgtcatacgggctcgacaccagctccacggctggagaggggagccgg
acgggcggcgggaggtccaggtctcccttccacctgaaccccacctcgtaccggcaggtg
tcgaggtcggaccccaacatgagctccacctccagcctggagcccgcggcagcccctttg
cacaactccacgttcgcgtccggctcctgcgccattctctccccaaccaagaaggttctc
tcccacgtccacctcaccctgtccccgaaattgcccaaaggaaagtctgaggagtccgcc
gtggagccacctgttcggcaggactgggtttcggagaggagagctggaggtacggagagc
acagctggcctacctcctgacttttccaccaggctgacctcacggaatcttccggaattt
tcggctcgcgagcagctgttccctgacggtcgtcctccggtggaccggagttcgtatttc
cctgctcccagggtaaccggctggaccgatgcgcgccaggaaccgaggtctacacctttg
ttattggatggggcgagttcacagggggtccctattcggccaatcggaagggagaatcgt
gagaccgctgacgcgtccgtccagatcaccacccaggaggtaccgtggagggcagagcct
gtcacaagcttcccacaatccttcactgctcagccaagagtgccgggtctgtctgagccc
ttagctattcacacaccagctgtgcctgttttgcttccgtacaaaccgcatgggagccca
gagctgttctacatccccaagagcgaggcaccactctccgacaccaccgtagagagctcc
catccaggctctgacgacgccgttccgccgcggttcagctccgaggtgctgggctccaga
gaccgggaggcaggggcggcggtcagcggcagacacgccgaagggatctacagcaagagg
cccgcggcttacagagcgcgcccaggacacggaggtctcagaatggacacggttggcggt
cttcagactaatgaagtccggcagagtggcaggccgtaccccctctctgtcaggacaggt
gactctggtgacccacccaggagttctgaggcatggccgaatgtcaggggcgtggacccc
cccagcagaggccaagaggaggtggagtttgtacccctacagggggaggagacctacagc
acggaggacctccgttcttacagtcgctctgtccgagagccccgccctctgggagggtca
gacagggaggggcccgcccacaattggcgggacttcgccaccaggggcgtgtcctctcag
agcagcggcggcaacctgaacgagctgtggcagaggttcaacgagaggcggagccagagg
gagtccggcccccccggggagggggaaacgcctttactggacaggctggagcgtctgtct
cggctgatccacagcagccgcaacgccacgcccctgggggggagggaagcgagcgccccc
ggcaagagacgggaggagaggaggaggaagcagggggagaaggaggagaagaggagagag
gaggaggagcagagagaggcggaccggaggagggggaacggagagcagcgctcggtccgg
gaggcctgggcggagccaggggcggagcaggaggaggagtctctgagcagctccaccctc
accgagggctcgttcggccggcaccgctgcccggcggagaaggacgggtcggcgagccgg
tccggcgatacggacgccagcgactcggccagcaccgcgtccaccatcgacaccgcccgc
ctcatccgcgccttcggccgcggccgggtccaggccaaccccggcctcaacaggctctac
agcgccatcggcaggcagagggagggcacggagcagaggagagggaggaagagaggcggg
cccaaacccccggccccgcccccagccccctccgagaccaacagcacggacagctccacc
ctcagcaccgtggccccgggcgagtctgtgtcgtcggacggcgacctgccccgggccccg
ccggatgtcctcgtggcgaagaaggcggtcaagctggtcaacaaaggagtccaggcaggt
gatgtggagattgtggtgaacgggaccaggaagcacacgcgagacgtgggcaccgtcttc
ccctcgcccatccctgccagggaggcggggcgctcggcgaacggcagcaggggaggccag
ggtgaagagaggagcccccctaaaacgcagagcttcatgaacgagaagaggagcaggaag
gcccaaatagagcgctaccctcaaggtgtgtcttggttcgtccctgcggacagcctgaaa
ggcaatgccaaggagaaccagccggggcccggggcattgcctgggcggggccaggtgtgg
ttcgagccctacaccaaaaccaagccctggagggagcccctgagagagaggcagatacag
gaggagccagtgagcatcaagaggaggagcccgggtcagccaatcggcagcgccgaaacg
gacacagacagcaaagcccctcccgccctggctcgcgttacacttcaggaggccctggag
atgcggcggccggacttcctgtcgcgctcgcgggagcgggtgaagaggctggagctgcag
gtggaggagcgcaggctgcaggccgtcttccagcaggagagggagcagctcttcaaccgg
cccgggggccgagggcagctcagccagcccgcagatttttcagctcacaggaagagagtc
gttcccaggaaagagatgttcaagagatccaagcaactgtctaatcatgagaaaaaggag
ttaagatctgacaaggtagccagtcagaggaaggctatgaggatatactcccagctgccc
gaagtacagcagaggatagaggaggagaagaggaaggccgagtatcgctcctacaggctt
aacgcccagctctacaagaagaaaatcaccaaccgcatcttggggagaaagacaccatgg
cagtga
DBGET
integrated database retrieval system
