Anguilla anguilla (European eel): 118228246
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Entry
118228246 CDS
T07545
Name
(RefSeq) cleavage stimulation factor subunit 3-like
KO
K14408
cleavage stimulation factor subunit 3
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118228246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118228246
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
118228246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
118228246
NCBI-ProteinID:
XP_035275499
LinkDB
All DBs
Position
5:41092342..41114870
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AA seq
716 aa
AA seq
DB search
MSAEGTSDQAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAIGTLLRKNMLLHFSFADYEESRMKHEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRTIFKKAREDARTRHHVYVSAALMEY
YCSKDKSVAFKIFELGLKKYGDVPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPEK
SGEIWARFLAFESNIGDLASILKVERRRFMAFKEEYEGKETALLVDRYKFMDLYPCSGSE
LKALGYKDVSRAKLAALIPETVVAPSAPALKDEADRKPEYPKPDTNQMIPFQPRHLAPPG
LHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPETMDVALEMIAG
RQPESAGEGNGPTENNGAPSKSLKRPSADSDEEEDKSAIAPPVHDIYRARQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaaggaacctccgaccaggctgcagagtatatcccagagaaagtgaagaaa
gcggaaaagaagttggaagaaaacccatatgaccttgacgcgtggagcatactgattcga
gaagcacagaaccaacctatagacaaagcaaggaagacgtatgagcgacttgtcgcccag
ttcccaagttctggcagattctggaagctatacattgaagctgagatcaaggctaaaaac
tatgacaaagttgaaaagctgtttcagaggtgtctcatgaaagtgcttcacatcgatctg
tggaagtgctacctttcttacgtccgcgagaccaagggcaagctgccaagctacaaagag
aagatggcacaagcctatgatttcgccttggacaagatcggtatggagatcatgtcatat
cagatatgggtggactacataaacttcctaaaaggagtcgaggcggtgggctcgtacgcg
gagaaccagcgaatcacggccgtgcgccgggtctaccagaggggctgcgtcaaccccatg
atcaacatcgagcagctgtggagggactacagcaagtacgaggaggggatcaatgtgcat
ctggctaagaaaatgatcgaagaccgcagcagggactacatgaacgccaggagagtggca
aaggagtacgagacggtgatgaagggcctggacaggaacgccccgtcggtgcccccccaa
aactccccccaggaagcgcagcaggtggagatgtggaagaagtacatccagtgggagaag
agcaacccgctgcgaacggaggaccagaccctcatcaccaagagagtcatgtttgcctac
gaacagtgcctgctggtcctgggacatcaccctgacgtctggtacgaggccgcgcagtac
ctggagcagtccagcaaactgctggctgaaaagggggacatgaacaacgccaagctgttc
agcgacgaggcggccaacatctacgagcgcgccatcggaaccctgctgaggaagaacatg
ctgctccacttctccttcgccgactacgaggagagtcgaatgaagcacgagaaggtgcac
agcatatacaaccgtctcctggccatagaagacattgacccaacgctggtttacatccag
tacatgaagttcgcgaggagagccgaggggatcaagtcgggccggaccatcttcaagaag
gcccgggaggacgcgcggacgcgccaccacgtctacgtgtcggccgccctgatggagtac
tactgcagcaaagacaaatcagtggcctttaagatatttgaacttggcctaaagaaatac
ggagatgttccagagtatatactggcatacattgattatctttctcaccttaatgaggac
aacaacacccgggttctgttcgagagggttctgacatcggggagcctgtcaccggagaaa
tccggggagatttgggcccgcttcctggcctttgaaagcaacatcggcgacctggccagc
atcctgaaagtggagaggcggaggttcatggccttcaaggaggagtacgaagggaaggag
acggccctgctggtggacagatacaagttcatggacctctacccctgctccggcagcgag
ctcaaagccctgggctacaaggacgtgtcccgggccaaactggcggcgctaatcccggag
acggtggtcgccccatctgcgcctgcgctgaaagacgaggcggacagaaagccggagtac
cccaaacccgacaccaatcagatgatccccttccagccccgccacttggcccctccagga
ctccaccctgttccagggggggtattccctgttcccccggctgctgtggtcctcatgaag
ctgctgcccccgcctacctgcttcacgggtcccttcgtgcaggtggatgagttgatggag
actttcagaaggtgcacacttccagaaacgatggacgttgccttggagatgatcgcgggg
aggcagccggagtcggccggcgaggggaacggcccgacggagaacaacggcgcgcccagc
aagtccctgaagaggcccagcgccgactccgacgaggaggaggacaagagcgccatcgcg
ccccccgtgcacgacatctaccgggcgcggcagcagaagaggatccggtga
DBGET
integrated database retrieval system
