Anguilla anguilla (European eel): 118228436
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Entry
118228436 CDS
T07545
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118228436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aang03021
]
118228436
03036 Chromosome and associated proteins [BR:
aang03036
]
118228436
Transcription machinery [BR:
aang03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118228436
Coactivators
SAGA/TFTC/STAGA complex
118228436
Chromosome and associated proteins [BR:
aang03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118228436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF1117
Motif
Other DBs
NCBI-GeneID:
118228436
NCBI-ProteinID:
XP_035275850
LinkDB
All DBs
Position
5:complement(39930572..40006950)
Genome browser
AA seq
1082 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLVAQSNPTGSHTETRSAESTGAANHHLGR
IQPAQVGTVLDQQQQQGQHKAGVNQEPNSKEISSEKTVMPSSLSSIPSFEEGSITSGTGV
NASSGLQSHGASNITTLSASGLVTLPHPMDSISPANRDSVVGSGGTDTVTTETDPQKSHI
TSNIRTASTGIQSLNGNDGAVTLANCPTNTAVPAAVAAFQPGSGTLPLADNDNTVVSSAS
AVSASLNVVQTANATTFNVAHTDFHTSHAAINLDGRGTPTIALQRLPSHIMASIAQNGNG
TTLSALVQQGARLGLPAAAATPLVNHSTSADANNPKSDSPVQSKIIMSSQPTVVSSTTNP
VTSSAPVVNPPSSQQQSSVASSLPAASSPVPLTAISKPTVTLGQQTATTVGMIRPGTPSP
SPIMATSPQPQQLRPGLGTPQRIVAPQLLVRPPQQQTTIQLPPGFTIPPGMVLVRTEMGQ
LVMVPQQALAQAQAQAQAQNSISPRPVTPTTGATFRVTTTQSPVSPQAIRPGPPVQAKVA
QSGSPAGSPALQAPPAASTKAAVTGGPVAAAVAVTVTASQQPSTVIAGGQTTPQAQPQTA
LPPQTAAAAVPASPVPGVSVISQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALV
QDLLDAKIEPEEFTNRLQSELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPLQQAKP
APPGGAAPAPGLVPGPTVRARHPNSVSATVSGALPGHGSAVGIKRAGVQGSQVRMPMVIT
QTVRGAVGKGPTIQASRSPMGFAVQVSANQKNKLNDPGGGSFRDDDDINDVASMAGVNLN
EESARILATNSDLVGTQIRSCRDETFLPTGLLHKRILETAKKFGVTEVPVEAVNLISHAT
QTRLRTVLEKVSTIAQHRMETCKDDEWYEQSTDVRSQLKFFEQLERMEKQRKEEQEREIL
LKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSPGAT
PSGTEVSGTSVGSPAGSGAPSTSSRQYSRHRITRVNLRDFIFYMEQERETARSLLLYRAL
LK
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagatatgctcttctccgaggtggacgaaaaagca
gttagcgacttagtgggctcacttgagtcgcagcttgtggcccagagcaacccaacaggt
tcccatactgaaactaggagtgctgagtctacaggcgctgccaatcaccacttaggaaga
atacaacctgcccaagtgggtactgtactagatcagcaacaacaacaaggacaacataaa
gctggggtaaatcaagagccaaactctaaagaaattagctccgagaaaactgtgatgccg
tcttctctcagttccattccgtcattcgaagaaggttccatcacttctgggactggagtg
aatgccagtagcggcttgcaatcacatggagcatctaacatcacaacactgtctgcatct
ggtctggtaactttaccacatccaatggacagcatcagtcctgcgaatagagattctgtc
gtgggttcaggagggacagatactgtaacgacagagaccgatcctcagaaaagtcacatc
acttcgaacataaggactgcttccacaggaatacagagtttgaacgggaacgatggagcg
gtgacgttagctaactgtccgacaaatactgctgttccggcggctgttgcggcttttcaa
cccggatctggaactttaccgttggctgacaacgataacacagttgttagcagtgccagt
gcagtcagcgccagtctgaacgtggttcagactgcgaacgccaccacttttaatgtagct
catactgatttccatacatcgcacgccgcgattaatctggatgggcgagggactcctaca
atagccctgcaaagactaccgagccacatcatggctagcatcgcacagaatggaaatggc
actacactttcggcattggtccagcaaggcgcacggctaggtctccccgccgctgcagca
accccgctagtcaaccacagcacaagcgcagatgccaataatccgaaatcagactctccc
gtgcagtcaaaaataatcatgtcgagccagcctaccgttgtcagttctacaaccaatcct
gtcacgtcgtcagctcctgttgttaaccctccttcgagtcagcagcagagttctgtagcc
agctcgttacctgccgccagcagccccgtccctctcactgctatatcgaaaccgactgtc
actttagggcaacaaacggccactaccgttggcatgataaggcctgggacgccttcgccg
tcacccataatggccacttctccccagccccaacaacttcgccctggattggggactcct
cagagaattgtggcacctcagctgcttgtcagacccccacagcagcaaaccaccatacaa
cttccacccggatttaccataccgccgggcatggtgctggtgcgcaccgagatggggcag
ctggtgatggtcccccagcaggctctggctcaggctcaggctcaggcgcaggcccagaac
agcatctccccccgacctgtgacccccaccaccggggccacgttcagagtgaccaccact
cagtctcccgtgtccccgcaggccatccggccgggccctccggtgcaggccaaggtcgct
cagtccggctcccccgccggcagccccgccctccaggctccgcccgcggcctccaccaag
gcagcagtgaccgggggcccggtggccgccgcggtggcggtgacggtgacggcttcgcag
cagccctccacggtgatcgcgggggggcagaccaccccccaggcccagccccagaccgcc
ctgcccccccagacggcagcggcagccgtccccgcttcccccgtcccaggagtctctgtt
atttcccaggagatgcaagaaaacgtaaagaaatgcaagaacttcctggccacactcatc
aaacttgcatcccacaactcgccttctccagagacttctcgaaacgtgaaggccctggtc
caggacctgctggatgccaagattgaacctgaggaattcaccaaccgcctgcagtcggag
ctcaagtcctctccccagccctacctggtgccctttctcaagaaaagcctgcctgccctg
aggctgtcgctgctcaacagccagcagtcgctgacgcagcccctgcagcaggccaagccc
gccccccccgggggggccgcccccgcccccggcctcgtccccgggcccaccgtccgggcg
cgccaccccaacagcgtcagcgccacggtttccggcgccctccccgggcatggctccgcc
gtgggcatcaagagagcaggtgttcagggcagccaggtccgtatgcccatggtgatcacg
cagactgtcagaggcgcagttgggaagggaccaacaatacaagcaagcagaagtcccatg
ggcttcgctgttcaggtctccgcaaatcagaaaaacaagctgaacgaccctggaggcgga
tctttcagggatgatgatgacatcaatgacgtggcgtccatggcgggggtgaacctgaac
gaagagagcgcccgcatcctggccaccaactccgacctggtggggacccagatccgctcc
tgcagggacgagaccttcctgcccacgggcctgctgcacaaacgcatcctggagacagcg
aagaagttcggcgtcaccgaggtcccggtggaagctgtcaacttgatctcgcacgcgacg
cagacgaggctacggacggtgctggagaaggtgtccaccatcgcgcagcaccgaatggaa
acgtgcaaagatgatgagtggtacgagcagtcgacggacgtgcggtcgcagctgaagttc
tttgagcagctggagaggatggagaagcagagaaaggaagagcaggagagagagatcctg
ctgaaggctgcgaaaagtcgctccaggcaagaggacccagagcaagctcggctgaaacag
aaagctaaggagatgcagcagcaggagctggcgcagatgaggcagcgagacgctaacctg
acggcgctggctgccatcgggccccggaagaaacgcaagctggactcccccggggccaca
ccgtcagggaccgaggtttcggggacctccgtgggctcgccggcgggctccggggccccc
tccacctcctcgcgccagtactcccggcaccgcatcacgcgcgtcaacctcagggacttc
atcttctacatggagcaggagagagagacggcccgctcgctcctgctctaccgggccctg
ctcaagtag
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integrated database retrieval system
