KEGG   Anguilla anguilla (European eel): 118228494
Entry
118228494         CDS       T07545                                 
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
aang  Anguilla anguilla (European eel)
Pathway
aang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118228494 (sf3b3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aang03021]
    118228494 (sf3b3)
   03041 Spliceosome [BR:aang03041]
    118228494 (sf3b3)
   03036 Chromosome and associated proteins [BR:aang03036]
    118228494 (sf3b3)
Transcription machinery [BR:aang03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     118228494 (sf3b3)
Spliceosome [BR:aang03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    118228494 (sf3b3)
 Complex B
    118228494 (sf3b3)
 Complex C
   U2 SnRNP specific factors
    118228494 (sf3b3)
Chromosome and associated proteins [BR:aang03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     118228494 (sf3b3)
    TFTC complex
     118228494 (sf3b3)
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Beta-prop_EML
Other DBs
NCBI-GeneID: 118228494
NCBI-ProteinID: XP_035275938
LinkDB
Position
5:18054917..18085257
AA seq 1216 aa
MFLYNLTLQRATGITHAIHGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYHPSKNMFEKVHQETFGKSGCRRIVPGQF
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQENLSPIMACQIADLANEDT
PQLYVACGRGPKSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGDKGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHSETNNLVLIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPEAIFGAPKAGSGQWASLVRLFNPIQGTTLDQVQLEQNEAAFSVAVCRFAGGE
DWYVLVGVARDLILNPRSVGGGFIYTYRLVGGGDKLEFVHKTPVEDVPLAIAPFQGRVLV
GVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYKRNENQL
IIFADDTHPRWVTTACLLDYDTMASADKFGNISIVRLPPNTSDDVDEDPTGNKALWDRGL
LNGASQKAEVIMNYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFF
QHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKGVSEELDRTP
PEVSKKLEDIRTRYAF
NT seq 3651 nt   +upstreamnt  +downstreamnt
atgtttctgtacaacctgactctgcagcgagccacaggcatcacccacgccatacatggc
aacttctctggaaccaagcagcaggagattgttgtttcccgggggaagatcttggagctg
ctgcgccctgatgccaacactgggaaggtgcacacactgctcaccatggaggtgtttggc
atcatccgctccctcatggcttttaggcttactggagggaccaaagactacatcgtggtg
ggcagcgactcagggcgtattgtgatcctggagtaccacccgtccaagaacatgtttgag
aaggtgcaccaggagaccttcggcaagagcggctgcaggcgcatcgtcccggggcagttc
ctcgccgtggaccccaagggcagagccgtcatgatcggtgccatcgaaaagcagaagctg
gtgtacattctgaaccgtgatgctgcggcccgactcaccatctcctctccgctggaggcc
cacaaggccaacaccctggtgtaccacgtggtgggcgtggacgtgggctttgagaacccc
atgttcgcctgcctggagatggactatgaggaagcggacaacgacccgaccggggaggcg
gcggccaacacccagcagacgctgacgttctacgagctggacctgggcctgaatcacgtg
gtgcgcaagtacagcgaggcgctggaggagcacggcaacttcctcatcacagttccggga
ggctctgatggccccagtggcgtgctcatctgctctgagaattacatcacctataaaaac
tttggggaccagcctgacatccgctgccccatcccacgcagaaggaatgacctggatgac
cccgagcggggcatgatcttcgtctgctcggccacgcacaagaccaagtccatgttcttc
ttcctggcccagaccgagcagggcgacatcttcaaggtcaccctggagacggacgaggag
atggtgacggagatcagaatgaaatactttgacaccatccccgtggcgacggccatgtgc
gttctgaaaaccggcttcctgtttgtgtcctccgaatttggcaaccattacctgtaccag
atcgcccacctgggcgacgatgacgaagagcccgagttctcctccgccatgcccctggag
gagggcgacaccttcttcttccagccccgccccctgaagaacctggtgctggtggacgag
caggagaacctgtccccaatcatggcctgccagatcgccgatctggccaatgaggacact
cctcagctgtacgtggcgtgcgggcgggggcccaagtccaccctgagggtcctgagacac
gggctggaggtgtcggagatggccgtgtccgagctgcccggtaaccccaatgccgtgtgg
acagtgcgccgacacattgaggatgagtttgacgcttacatcatcgtgtccttcgtcaac
gccacgctggtgctgtccatcggagagaccgtagaggaagtgacggactccggcttcctg
gggaccacgcccaccctgtcctgctccctgctgggggaggacgccttggtgcaggtgtac
ccggacgggattcgccacatccgcgcggacaagcgcgtgaacgagtggaagaccccgggg
aagaagaccatcgtgcgctgcgcggtcaaccagaggcaggtggtcatcgcgctgaccggc
ggcgagctggtctacttcgagatggacccgtcagggcagctgaacgagtacacggagagg
aaggagatgtccgcggacgtcgtgtgcatgagcctggccaacgtgccgcccggcgagcag
cgctcccgtttcctggccgtgggattggtggacaacaccgtccgcatcatctccctggac
ccctcggactgcttgcagcccctcagtatgcaggctttgcctgcccagcccgagtctctc
tgcatagtggagatgggcggggtggagaagcaggacgagctgggagacaagggctccatc
ggcttcctgtacctcaacatcgggctgcagaacggtgtcctgctccggacggtgctggac
ccagtgaccggcgacctgtccgacactcgcacacgctacctggggtcacgtcccgtcaag
ctcttccgggtcaggatgcagggacaggaagctgtcctggccatgtccagccggtcctgg
ctgagctactcgtaccagtcccgcttccacctgacgccgctgtcctacgagacgctggag
tacgcctcgggcttcgcctcggagcagtgccccgagggcatcgtggccatctccaccaac
accctgaggattttggctctggagaaactgggcgcggtcttcaaccaggtggccttcccc
ctgcagtacacgccccgcaagtttgtgatccacagcgagaccaacaacctcgtcctgatc
gagacggaccacaacgcctacaccgaggccaccaaagcccagcgcaagcagcagatggcc
gaggaaatggtggaggcggcgggggaagacgagagggagcttgctgcggaaatggccgcc
gccttcctgaacgagaaccttccggaagccatcttcggagcgccgaaggcggggtccggc
cagtgggcctctctggtgcggctcttcaaccccattcagggcaccaccttggaccaggtc
caactggagcagaatgaggctgcgttcagtgtggctgtgtgtcggttcgccggtggtgaa
gattggtacgtcctggtgggcgtggccagggacctgattctgaacccgcgttcagtggga
ggcggcttcatctacacctatcgtctggttgggggcggggacaagctggagtttgtacat
aagactccggtagaggacgtcccattggccattgccccattccaggggcgtgtcctggtg
ggcgtgggaaaactgctgcgcatctacgacctgggcaagaagaagctgctccgcaagtgt
gagaacaagcatgtgccgaacctggtgacgggcatccacaccattgggcagcgcgtcatc
gtgtcggacgtccaggagagcctcttctgggtccgctacaagcgcaacgagaaccagctg
atcatattcgccgacgacacgcacccccgctgggtcaccaccgcctgcctgctggactac
gacaccatggcttccgcggacaagttcggcaacatcagcatcgtccgcctgcctcccaac
actagtgacgatgtagacgaagaccccacagggaacaaggcattgtgggacagggggcta
ctcaacggtgcttcccaaaaggcagaggtgatcatgaactaccacatcggcgagacggtg
ctctccctgcagaagaccacgctgatccccggggggtccgagtcactggtctacaccacg
ctctcgggcggcatcggcatcctggtgcccttcacctcccacgaggatcatgacttcttc
cagcacttggagatgcacatgcggtcggagttcccgcccctttgcgggagggaccacctc
agtttccgctcctactatttccctgttaagaatgtgattgacggggacctgtgcgagcag
ttcaactccatggacccacacaagcagaagggggtgtccgaggagctggaccgcacgccc
cccgaggtttccaagaaactggaggacattcgcacccgctacgccttctag

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