Anguilla anguilla (European eel): 118228871
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Entry
118228871 CDS
T07545
Symbol
vcam1a
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118228871 (vcam1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aang04515
]
118228871 (vcam1a)
04090 CD molecules [BR:
aang04090
]
118228871 (vcam1a)
04091 Lectins [BR:
aang04091
]
118228871 (vcam1a)
Cell adhesion molecules [BR:
aang04515
]
Immunoglobulin superfamily
VCAM
118228871 (vcam1a)
CD molecules [BR:
aang04090
]
Proteins
118228871 (vcam1a)
Lectins [BR:
aang04091
]
I-type lectins (Siglecs)
118228871 (vcam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
DUF2808
C2-set_2
Psg1
ICAM1_3_5_D2
Invasin_D3
ICAM_N
C1-set
Motif
Other DBs
NCBI-GeneID:
118228871
NCBI-ProteinID:
XP_035276302
LinkDB
All DBs
Position
6:2283870..2289305
Genome browser
AA seq
566 aa
AA seq
DB search
MALWMLWIFVLPAAFSLDSLEPKYSTSQLGDRLVLKCSTRRCEKPSFTWRALDDQPLMHT
SETNPSPTESQLVFHPVTLTRKTTIECGVFCGGKKFFRKAQVNVYSFPADPEVSGYDHLR
HGEKSNLTCVVRDIYTADLLKVEWVQGETVLSTTEHEMSADDAVETHTSVYSYIPDFGDG
KKNITCRATLDLDGVPVNQQTRQTTVNLTVQTPPRNTTVTVSPSWQVQEGQNVTISCRTV
SSPSPRYVLKKDGSDVEMESQDGTFRLQQVQLRDAGLYQLTVSNRLGSSTERLTLNVTGP
PQNTTVTVSPSWQVQEGQDVTISCRTVSSPPPRYVLKKDGSDEGMESQDGTFRLRQVQLR
DAGLYQLTVSNQLGSSTERLTLNVTAPPRNTTVTVSPSWQVQEGQNVTISCRTVSSPPPR
YILKKDGSDVEMESQDGTFWLQQVQLRDAGLYQLNVSNRLGSSTERLTLSVTAPPRNTTV
TVSPSWQVQEAQDVTISYRTVRSPNSSFPSVPLPVQDPPPKDHIILLAVIGPTVAVVTIA
ALVTHHLWKAKTRGVYELGKDVLLPV
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggctttgtggatgctttggatttttgtccttccagcagctttttcattggattccctg
gagccaaaatattccacgtctcaactcggcgaccgtctcgtgctgaagtgcagcacgagg
cgctgcgagaaaccgagtttcacgtggagggcgctggacgaccagccgctcatgcacaca
tccgagaccaacccgtcaccaacggagtcgcaactcgtctttcaccctgtgaccctcacg
cgcaaaaccacgatagagtgcggtgtattttgcggtggtaaaaagtttttcagaaaagca
caagtaaatgtgtattcttttcccgcggaccccgaggtgtcagggtacgaccacttacgg
cacggggagaagagcaacctcacctgcgttgtgcgggacatctacaccgcggatctgctg
aaggtcgagtgggtccagggcgagacggttctcagcacgacggagcacgaaatgtctgcg
gacgatgcagtggagacgcatacctccgtctactcctacatccccgatttcggagacggg
aagaagaacatcacttgcagagccacgcttgatttggacggtgtccctgtcaatcagcaa
acccggcagaccacggtgaatctgaccgtacagacgcccccccggaacaccacggtaacg
gtgtccccgtcctggcaagtgcaggagggtcagaacgtcaccatctcctgccgaacggtc
agctccccgtcgcctcgctacgtcctgaagaaagacggcagcgacgtcgagatggagtcc
caggacggaacgttccggctacagcaggtccagctgcgtgacgccggtctctaccagctc
accgtctccaaccggctgggctccagcaccgagcggctaacgctcaacgtgacggggccc
ccccaaaacaccacggtaacggtgtccccgtcctggcaagtgcaggagggtcaggacgtc
accatctcctgccgaacggtcagctccccgcctcctcgctacgtcctgaagaaagacggc
agcgacgaggggatggagtcccaggacggaacgttccggctacggcaggtccagctgcgt
gacgccggtctctaccagctcaccgtctccaaccagctgggctccagcaccgagcggcta
acgctcaacgtgacagcgcccccccgaaacaccacggtaacggtgtccccatcctggcaa
gtgcaggagggtcagaacgtcaccatctcctgccgaacggtcagctccccgccgcctcgc
tacatcctgaagaaagacggcagcgacgtcgagatggagtcccaggacggaacgttctgg
ctacagcaggtccagctgcgtgacgccggtctctaccagctcaacgtctccaaccggctg
ggctccagcaccgagcggctaacgctcagcgtgacggcacccccccgaaacaccacagtg
acggtgtccccgtcctggcaagtgcaggaggctcaggacgtcaccatctcctaccgaacg
gtccgctccccaaactcatcgttcccatctgtgccccttccagtgcaggacccgcccccc
aaagaccacatcatcctgctcgcggtcattggccctaccgtcgccgtggtaaccatcgca
gccttggtgacgcatcacttgtggaaggcgaagacgcgtggggtgtacgagctgggcaag
gacgtcctgctccccgtgtag
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