Anguilla anguilla (European eel): 118229500
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Entry
118229500 CDS
T07545
Symbol
cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118229500 (cdc40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aang03041
]
118229500 (cdc40)
Spliceosome [BR:
aang03041
]
Complex C
Other components
Step II factors
118229500 (cdc40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
EIF3I
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
118229500
NCBI-ProteinID:
XP_035277378
LinkDB
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Position
6:56327333..56360789
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AA seq
578 aa
AA seq
DB search
MSVGVASLVSYGTDSDSDNDAETNIKPEKTDPDAIAHLLPLSSGKKTSLTVLNSAPEVAV
KEDVMTGTHLDPSLKEVTFNPTYETMFAPEFGPVNPFKTQQMAAPRNMLSGYAEAAHVND
FMFEQQRRTFSTFGYALDPSVDTSQVSSNSYIGAVDEAEKNKGLTVFEAGAKKSEKRKKL
KGGDASEIDSFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKKGKNEEDAPAEEKTVL
HVKDMYDYQGRSYLHIPQDVGMNLRTADIPDKCYLPKKQLHVWSGHTKGVSAIRLFPVSG
HLLLSSSMDCKIKLWEVYKDRRCIRTFIGHSKAVRDICFNNTGTQFLSAAYDRYLKLWDT
ETGKCISRFTNRKVPYCVKFNPDEDKQSLFVAGMSDKKIVQWDVRTGEVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcggcgtggcgtctcttgtatcgtacggaactgattcagactcggataatgat
gccgagacgaatataaaaccagaaaagacagacccagacgcaatcgctcatcttcttcct
ctaagttctggaaaaaagacttcattaacggtcctaaattcagctccagaggtcgcagta
aaggaagatgtgatgaccggaactcacctggacccctcgctaaaggaggtcaccttcaat
ccaacatacgagaccatgtttgccccagagtttggcccggtcaacccattcaaaacccag
cagatggcagctcccagaaacatgctgtcggggtacgctgaggcagctcatgtcaacgac
tttatgtttgaacagcagcggcggacgttttctaccttcggctacgcgctcgatccgtcc
gtggacaccagccaggtctcctccaacagctacatcggagcggtcgatgaggccgaaaag
aacaaaggactgaccgtcttcgaggccggcgcaaagaaatcggagaagaggaaaaagctg
aaagggggcgacgcttccgaaatcgacagcttcctgggaccctgggccaagtacgtggac
gagaaggaggtggccaagccctcggaagaggagcagaaggagctggacgagatcaccgcc
aaacggcagaagaaagggaagaacgaggaagacgccccggcggaggagaagaccgtcctc
cacgtcaaggacatgtacgactaccagggccggtcgtacctgcacatcccgcaggacgtg
gggatgaacctgcgcaccgccgacatcccggacaagtgctacctgcccaaaaaacagctg
cacgtctggtccgggcacaccaagggcgtcagtgccatacgtctgtttcctgtttctggc
cacctgctgctgtcctcttccatggactgcaaaatcaagttgtgggaggtgtataaagat
cgaaggtgcatacggacgtttatcggacacagtaaggccgtgcgggacatctgttttaat
aacactggaactcagttcctcagcgccgcctatgaccgctacctgaagctgtgggacacg
gagacagggaagtgcatctctcgattcaccaataggaaggtgccgtactgcgtcaagttc
aacccggacgaggacaagcagagcctgtttgtggcggggatgtccgataagaagatcgtc
cagtgggacgtccggaccggggaggtggtccaggagtacgacagacatctgggggccgtc
aacaccatcaccttcgtggacgaaaacagacgcttcgtcagcacgtccgacgacaagagt
ctgcgagtttgggaatgggacattcctgtggacttcaagtacatcgccgagcccagtatg
cactccatgcccgctgtgaccctgtcaccaaacgggaagtggctggcctgccagtccatg
gataaccagatcctgatcttcggggcgcagaaccgcttccggctcaacaagaagaagatc
ttcaagggccacatggttgccggctacgcctgccaggtggacttctcccccgacatgagc
tacgtggtgtcgggcgacgcggacgggaagctgaacatctgggactggaagaccaccaag
ctgtaccaccgcatcaaggcccacgacaaggtgtgcatcagcgccctgtggcacccgcac
gagacctccaaggtcatcacctgcggctgggacggacagatcaagctgtgggactag
DBGET
integrated database retrieval system