KEGG   Anguilla anguilla (European eel): 118229500
Entry
118229500         CDS       T07545                                 
Symbol
cdc40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
aang  Anguilla anguilla (European eel)
Pathway
aang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118229500 (cdc40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aang03041]
    118229500 (cdc40)
Spliceosome [BR:aang03041]
 Complex C
  Other components
   Step II factors
    118229500 (cdc40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 EIF3I WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_SCAP WDR90_beta-prop_4th WD_LRWD1 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 118229500
NCBI-ProteinID: XP_035277378
LinkDB
Position
6:56327333..56360789
AA seq 578 aa
MSVGVASLVSYGTDSDSDNDAETNIKPEKTDPDAIAHLLPLSSGKKTSLTVLNSAPEVAV
KEDVMTGTHLDPSLKEVTFNPTYETMFAPEFGPVNPFKTQQMAAPRNMLSGYAEAAHVND
FMFEQQRRTFSTFGYALDPSVDTSQVSSNSYIGAVDEAEKNKGLTVFEAGAKKSEKRKKL
KGGDASEIDSFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKKGKNEEDAPAEEKTVL
HVKDMYDYQGRSYLHIPQDVGMNLRTADIPDKCYLPKKQLHVWSGHTKGVSAIRLFPVSG
HLLLSSSMDCKIKLWEVYKDRRCIRTFIGHSKAVRDICFNNTGTQFLSAAYDRYLKLWDT
ETGKCISRFTNRKVPYCVKFNPDEDKQSLFVAGMSDKKIVQWDVRTGEVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgtcggtcggcgtggcgtctcttgtatcgtacggaactgattcagactcggataatgat
gccgagacgaatataaaaccagaaaagacagacccagacgcaatcgctcatcttcttcct
ctaagttctggaaaaaagacttcattaacggtcctaaattcagctccagaggtcgcagta
aaggaagatgtgatgaccggaactcacctggacccctcgctaaaggaggtcaccttcaat
ccaacatacgagaccatgtttgccccagagtttggcccggtcaacccattcaaaacccag
cagatggcagctcccagaaacatgctgtcggggtacgctgaggcagctcatgtcaacgac
tttatgtttgaacagcagcggcggacgttttctaccttcggctacgcgctcgatccgtcc
gtggacaccagccaggtctcctccaacagctacatcggagcggtcgatgaggccgaaaag
aacaaaggactgaccgtcttcgaggccggcgcaaagaaatcggagaagaggaaaaagctg
aaagggggcgacgcttccgaaatcgacagcttcctgggaccctgggccaagtacgtggac
gagaaggaggtggccaagccctcggaagaggagcagaaggagctggacgagatcaccgcc
aaacggcagaagaaagggaagaacgaggaagacgccccggcggaggagaagaccgtcctc
cacgtcaaggacatgtacgactaccagggccggtcgtacctgcacatcccgcaggacgtg
gggatgaacctgcgcaccgccgacatcccggacaagtgctacctgcccaaaaaacagctg
cacgtctggtccgggcacaccaagggcgtcagtgccatacgtctgtttcctgtttctggc
cacctgctgctgtcctcttccatggactgcaaaatcaagttgtgggaggtgtataaagat
cgaaggtgcatacggacgtttatcggacacagtaaggccgtgcgggacatctgttttaat
aacactggaactcagttcctcagcgccgcctatgaccgctacctgaagctgtgggacacg
gagacagggaagtgcatctctcgattcaccaataggaaggtgccgtactgcgtcaagttc
aacccggacgaggacaagcagagcctgtttgtggcggggatgtccgataagaagatcgtc
cagtgggacgtccggaccggggaggtggtccaggagtacgacagacatctgggggccgtc
aacaccatcaccttcgtggacgaaaacagacgcttcgtcagcacgtccgacgacaagagt
ctgcgagtttgggaatgggacattcctgtggacttcaagtacatcgccgagcccagtatg
cactccatgcccgctgtgaccctgtcaccaaacgggaagtggctggcctgccagtccatg
gataaccagatcctgatcttcggggcgcagaaccgcttccggctcaacaagaagaagatc
ttcaagggccacatggttgccggctacgcctgccaggtggacttctcccccgacatgagc
tacgtggtgtcgggcgacgcggacgggaagctgaacatctgggactggaagaccaccaag
ctgtaccaccgcatcaaggcccacgacaaggtgtgcatcagcgccctgtggcacccgcac
gagacctccaaggtcatcacctgcggctgggacggacagatcaagctgtgggactag

DBGET integrated database retrieval system