Anguilla anguilla (European eel): 118229568
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Entry
118229568 CDS
T07545
Name
(RefSeq) collagen alpha-5(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04382
Cornified envelope formation
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04518
Integrin signaling
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118229568
04518 Integrin signaling
118229568
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118229568
09142 Cell motility
04820 Cytoskeleton in muscle cells
118229568
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118229568
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118229568
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118229568
Exosome [BR:
aang04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118229568
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118229568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118229568
NCBI-ProteinID:
XP_035277518
LinkDB
All DBs
Position
6:6499714..6526587
Genome browser
AA seq
1654 aa
AA seq
DB search
MACPRCPALLLPAALVLVLSALALEAKECVCNGKSRCHCKGVKGDKGEKGYPGIDGPSGL
IGFPGLEGPVGPAGLKGSNGFPGARGFKGNRGTPGKPGFAGTPGLPGTPGNMGEMGPPGF
PGCNGTKGEKGYPGLSGYPGLDGPMGFRGAPGPKGDPASPPCEVKGQRGPPGSPGINGQP
GFPGAMGPPGPPGPIGAQGALGLRGLPGEKGREGRSTGIPGPRGQKGDQGPPGVPGLKGI
KLYATAPKDLKGDPGVKGEKGCRGTPGRPGHSALTAVKGDPGDPGGEGKLGKDGNRGLPG
LEGHEGHRGIPGALGISGSKGEKGSTGLPGPPGSVTLVGNFSKGRQGIPGPPGPKGSPGP
PGEDGFPGHPGAPGERFSQGPPGLPGPPGLIGPKGEKGDSDGYIPGPPGQDGRPGNPGPP
GDQGPPGPPGPRTGIPEPRGPKGQKGILGEPGLMGRPGDKGDKGVSCLCSGKGTGLFGLP
GPPGPPGQPGWNGQPGQKGDMGIKGLMGPSGPPGPDGRPGPPGYPGQKGEGGISPRPAGK
GDRGSPGYPGSPGQHGARGRHGHPGAKGQRGPKGDSHGLLGSKGERGPPGSLGRQGNQGL
TGIPGPPGFGPSGVPGQKGNRGVEGTPGTPGAAGEKGDPSNILTNRGDPGPKGNRGDPGM
PGPPGIGIGYPGVPGLPGFPGDKGEKGTPGTQQVIPGEKGDRGPPGQPGAPGFGAPGLQG
ISGLPGFQGEKGYVESGPQGPTGRLGPPGPSGDLGAPGDFGQRGFPGPTGSPGRDGPPGV
KGEKGVAGVTGPPGLPAPCQNGLPGPQGLPGPRGEWGFTGPRGLKGLKGEPGLPGFSQPG
PKGEIGPPGVSLPGGLGPFGSKGVPGSDGLPGLPGPLGDPGIPGPPGYGPDGPPGYDGPP
GPKGSPGLSGPEGLRGSQGMLGDTGAPGIPGPQGIVVGNKGDPGPPGQQGPTGVQGNAGD
QGPRGQDGRNGTPGRHGTQGAPGEPGLGGFPGQPGDPGSPGDRGLGGHQGLKGEKGTAGV
PGGGGPPGAPGVRGPKGVKGEPSFSRPGPAGPPGPKGELGYPGLYGVKGEKGVLGSPGVV
GLDGSVGDKGDEGPPGDPGPQGIPGGQGYSGSQGAPGPPGPYGPPGIPGTPGIPGPRGLK
GNQGKDSIPGPPGQKGEPGAVLGSPGVRGEKGLLGQKGEPGSPGPDAPGLPGVPGERGSP
GLRGLPGYRGNPGADAICSFGPKGDPGPDGCPGVPGPQGPPGPPGPPSQAYKGDKGEAGW
PGPVGPNGYRGDIGVLGQPGEQGGPGSPGLKGEMGLAGQPGPVGERGDANLYPGFKGPAG
EKGPPGPPGPKGYAVSGEVIVIKGDQGPTGDPGFPGPRGPTGPPGQQGPQGVLGRRGVSR
HGRPGYPGFPGPKGERGRSGLPGELGDTGSPGRKGQRGLPGGVVPSTRAQSFLITRHSQT
AQDPQCPTGSTKIYSGYSLLYINANDRGHGQDLGTLGSCLSRFSTMPFLFCDIEGTCRYA
SRNDYSYWLSTAEETPRSMELIPAEDLHKFISRCSVCETSRNTIAVHSQTTRTPDCPQGW
GSLWTGFSFAMQTAAGAEGSGQPLASPGSCLESFRQVPFIECHGRGTCNYYPDSYSYWLA
SLDPDDVFRKPVSQTVKRPNLETVISRCHVCMKQ
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcccgcggtgcccagccctgctgctgcccgccgctctggtcctggtcctgagc
gcgcttgcgctggaggctaaagagtgcgtgtgcaatgggaagtccaggtgccactgtaaa
ggagtgaaaggagacaagggggagaaagggtaccccgggatcgatggacccagtgggctg
atcgggtttccgggactcgagggaccagtgggacctgcgggcctgaaggggtccaacggt
tttcctggggcccgtggattcaaaggcaaccggggaactccaggaaaaccagggtttgct
ggaactccagggttgccaggaacgccaggaaatatgggagagatgggacctccaggtttc
ccaggatgcaatgggacaaagggggaaaaaggttatcctggtctctctggttatcctgga
ttggacggaccaatgggttttaggggtgcacctggaccgaagggtgacccagcttcgccc
ccttgtgaagttaaagggcaacgagggccaccaggaagtcctggcatcaacggacagccg
gggtttccaggagcaatgggcccacctgggcctccagggcctataggcgcacagggagca
ttgggtttgcgtggcctaccaggggaaaagggtagggaagggcggagcacggggattcca
ggccccaggggccagaagggcgatcaaggtccgcccggggtcccggggttgaagggaatt
aagctgtacgccacggcgcccaaggatctgaagggggacccaggcgtaaagggtgaaaag
ggttgccgaggaaccccaggtcgtcctggacactcagcactgacggctgtgaaaggggac
cctggggatccaggtggtgaggggaaactcggcaaagatggcaaccgtggactgcctgga
ttggagggtcacgaaggacaccgggggattccaggtgccttggggatctcagggtcaaag
ggagagaaaggttcaacaggcctcccaggccctccagggtcggtgacattggtagggaac
ttcagcaaagggcggcagggaatacctggaccacctggacccaaaggctcacctggcccc
ccaggtgaagatggttttcctggacatccaggagccccaggtgaaaggttctcccagggg
cctccagggctccctggtcccccgggtctaattggcccaaagggagagaagggtgattct
gatggatacatcccaggacccccaggccaagatggacgtccagggaaccctggtccccca
ggcgaccaaggccccccaggccccccaggccccaggacaggcattccggaacctcgaggg
ccaaagggccagaagggaattctgggggaaccaggactgatgggtcggcccggagacaaa
ggggacaagggagtgtcctgtctctgttctgggaaaggaactgggctcttcggtctccct
gggcctcctggtccgccaggacaacccggctggaatggacagcctggtcagaagggagac
atgggaatcaaaggactcatgggtccctcaggtcctccgggcccagatggaagaccaggt
cctccaggctacccagggcagaagggggaaggaggcatcagtcctcggccagcaggcaag
ggtgacagaggttccccaggatacccggggagtcccggtcaacacggagcacgggggcgc
catggacacccaggggccaagggccaacggggccccaagggcgattcgcatgggctgcta
ggctcaaagggggaacggggccctccggggtctcttggtcgtcaaggaaaccagggtcta
acaggaatcccagggccgccaggttttgggccatccggcgttccagggcagaagggcaat
cgaggggtggagggcaccccgggcacacctggagcagcaggtgaaaaaggggatcccagc
aatattttgacaaacagaggagacccgggtccaaaaggaaacaggggtgacccagggatg
cctggtccaccaggaataggtattggttatcctggggtgccaggtttacctggttttcct
ggtgataagggggaaaagggcactcctggaacacagcaagttatcccaggagagaaaggt
gacagaggccctcccgggcagccaggtgctcctgggtttggggcgccaggactgcaaggc
atttcgggactccctggattccagggtgaaaagggctatgtggagtctggcccccagggg
cccacgggtaggctggggcccccaggtccgagtggagaccttggtgccccaggagatttt
gggcagagggggtttcctggccctactggaagtccaggacgagatggtccacctggagtg
aaaggggagaaaggggttgctggtgtcacaggcccacctggcctccccgcgccctgccaa
aatggacttcccggtccacagggacttcctgggccgagaggagagtggggtttcacagga
cctcgagggctgaaggggctgaagggcgagccgggccttcctgggttcagccagcctgga
cccaaaggggagatcggaccacctggggtttccctacctggagggctaggaccgttcggg
tcaaagggtgtccctgggtcggatggccttcctggacttccaggccccttgggagatcct
ggaatcccaggcccccctggatatggaccagatggacctcctggatatgatggaccacca
ggaccaaaagggtctccgggactttctggtccggaaggcctcagaggaagccaaggaatg
ctgggggatactggagcccctggaataccaggaccacagggcattgtcgtggggaataaa
ggtgaccccggtcccccaggtcagcaggggcctactggtgtgcaagggaatgcaggtgat
caaggacccagaggacaagatgggaggaatgggacaccaggaaggcatggcacacaaggt
gctccaggtgagcctggtcttggggggtttcctggacaacctggcgatcctggttcccct
ggagaccgtggattagggggacaccaagggttgaaaggagagaagggaaccgcaggtgtg
cccgggggaggagggccacctggggcacctggtgtacgtggaccgaaaggagtgaaagga
gagcccagcttcagcaggcccggtccagcaggaccacctggcccgaagggagagcttgga
tatccaggtttatatggtgtgaagggtgaaaagggggttttggggagcccaggggtcgtt
ggcctcgatggcagcgttggagacaaaggagacgaaggcccccccggagatccaggaccc
caggggatccccggagggcaggggtatagcggatcccagggtgcaccggggcctccgggg
ccatacggcccaccaggcattccggggactcctggaattccggggcctaggggactcaaa
ggaaaccagggaaaggacagcattccgggacccccgggacagaagggagagccaggggcg
gtgctcggaagcccaggcgtgcggggggagaagggcctgctcggtcagaaaggagaacca
ggaagtcctgggcctgacgcaccagggctaccaggagtcccgggggaaagaggatcgcct
ggtctgaggggacttcctggttaccgtggcaaccctggggcagatgcgatctgttctttt
gggccgaaaggggaccccgggccggacggctgtcctggagtccctggaccacagggacca
ccaggcccacccggtcctccatcacaagcttataaaggagataagggggaagcgggctgg
cctggaccagtgggcccaaacggctacagaggcgacattggggttcttgggcagccggga
gaacagggaggccccggctcgcctgggctcaaaggtgaaatggggctcgctggacaacca
ggaccagtcggtgagagaggagatgccaatttgtatcctggtttcaaagggcccgccgga
gagaaggggcccccagggccaccaggcccaaagggatatgcagtttcgggggaagtcatt
gtgatcaaaggggaccaagggccaactggagacccaggatttccagggccccggggcccc
acaggtcccccaggacaacaagggcctcaaggggtcctcgggcgcaggggagtctccagg
cacggtcgccccggctacccaggttttccgggaccgaaaggagaaagaggccggtcgggg
ttgccaggggagctgggggacacggggtcccccgggcggaagggccagcggggcctccca
gggggcgtggtcccgtccacgcgcgcacagagcttcctgatcactcggcacagtcagacg
gcccaggacccccagtgccccacgggcagcaccaaaatctactccggatactccctactt
tacatcaacgccaatgacagggggcatggacaggacctgggaaccctgggaagctgcctg
agtcgcttcagcaccatgcctttcctgttctgtgacatcgaggggacctgtcgctacgcc
tctcgaaatgactactcttattggctctccaccgccgaggagacgcccagaagcatggag
ctaattcctgctgaagacctgcacaagttcatcagcaggtgttcggtttgtgagaccagc
aggaacacgatcgccgtccacagccagaccactcgaaccccggactgtccccagggctgg
ggctccctgtggaccggattctccttcgccatgcaaacggcggccggggctgaaggctct
gggcagccattggcttctccgggctcctgtctggagagtttccggcaggttcccttcatc
gagtgccacggacgcggcacctgcaactactaccccgactcttacagctactggctggcc
tccctcgaccctgacgatgtgttcaggaagccagtttctcagacggtgaagaggccaaac
ttggaaaccgtcatcagtcgctgccatgtctgcatgaaacagtag
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