Anguilla anguilla (European eel): 118229887
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Entry
118229887 CDS
T07545
Symbol
ddx61
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118229887 (ddx61)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118229887 (ddx61)
03036 Chromosome and associated proteins [BR:
aang03036
]
118229887 (ddx61)
Enzymes [BR:
aang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118229887 (ddx61)
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118229887 (ddx61)
mRNA degradation factors
5'-3' decay
Decapping complex
118229887 (ddx61)
Chromosome and associated proteins [BR:
aang03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118229887 (ddx61)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
TmoB
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
118229887
NCBI-ProteinID:
XP_035278278
LinkDB
All DBs
Position
1:73826511..73842587
Genome browser
AA seq
496 aa
AA seq
DB search
MATARTENPASMVMGMSKPNGQLRGQPKPTSLPSGPTALGSQAGKAPSTPQKGGSALQNS
GGIRFGDDWKKCLQLPPKDTRVRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQ
EESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDFIQAMVMVPTRELALQVSQI
SIQVAKHLGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDRLQMM
VMDEADKLLSQDFVVLIEDIISFLPKNRQILLYSATFPISVQKFMAKHLQKPYEINLMDE
LTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFY
IHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIG
RSGRFGHLGLAINLITSEDRFNLKAIEDQLVTDIKPIPGSIDKSLYVAEFHSGSPECEGQ
EGDRETTHPLGELHQA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggccacagcaagaacggagaaccctgcctccatggtcatgggaatgagcaagccgaac
gggcagctcagaggacagccgaagccaacatctcttccatcaggacccaccgccctgggc
tctcaggcaggaaaggcccccagcaccccccagaaaggaggcagcgccctccagaacagc
ggtggcatcaggtttggtgatgactggaagaagtgcctgcagctcccacccaaagacacg
cgagtcagaacctcagacgtgacggcgaccaagggcaacgagtttgaggactactgcctg
aagagggagctgctgatgggcatctttgagatgggctgggagaagccctcccccattcag
gaggagagcattcccatcgctctgtccggcagggacattttagcccgtgccaagaacggc
acgggcaagagtggcgcctacctcatccccctgctggagcggatagatctgaagaaggac
tttatacaggccatggtgatggtccccacccgagagctggccctgcaggtcagccagatc
agtatccaggtggccaagcacctgggcggggttaaagtcatggcgaccacggggggcacc
aacctgagggacgacatcatgaggctggacgaaacggtgcatgtggtgatcgccacgcca
ggcaggatcctggacctaatcaagaagggcgtggccaaagtggaccggctgcagatgatg
gtgatggatgaggcggacaagctcctgtcccaggactttgtggtcctgatcgaggacatc
atcagcttcctgcccaagaaccggcagatcctgctgtactcggccaccttccccatcagc
gtgcagaagttcatggccaagcaccttcagaagccctatgagattaacctgatggatgag
ctcacgctgaagggcatcacccagtactacgcctacgtcactgagagacagaaagtgcac
tgcctcaacacgcttttctccaggttgcaaataaaccagtccatcatcttctgtaactcc
actcaaagagtggagctcctggccaagaaaatcacacagctgggctactcctgcttttac
atccatgccaaaatgatgcaggagtacaggaaccgtgttttccacgacttcagaaacgga
ctgtgcaggaacctggtctgcacagatcttttcaccagaggaattgacatccaggctgtg
aatgtcgtcatcaacttcgacttccccaaaaacgcagagacgtacctccaccgcatcggg
aggtcagggagattcggccacctgggtctggccatcaacctgatcacgtcggaggaccgc
ttcaacctgaaggccatcgaggaccagctggtgacggacatcaagcccatcccgggcagc
atcgacaagagcctgtacgtggccgagttccactccggcagccccgagtgtgaggggcag
gagggcgaccgggagaccacccaccccctgggggagctgcaccaagcctga
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