Anguilla anguilla (European eel): 118230084
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Entry
118230084 CDS
T07545
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang00100
Steroid biosynthesis
aang01100
Metabolic pathways
Module
aang_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
118230084 (fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
aang01006
]
118230084 (fdft1)
Enzymes [BR:
aang01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
118230084 (fdft1)
Prenyltransferases [BR:
aang01006
]
Terpene biosynthesis
Squalene/phytoene synthase
118230084 (fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
118230084
NCBI-ProteinID:
XP_035278715
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All DBs
Position
6:complement(30196895..30212192)
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AA seq
458 aa
AA seq
DB search
MAGPCCKSTVYFLVLKRSLSVPPRSSVTAARPTLSAGRLGERGVQEGCWAARPNALRTAG
SYRHPVFLCFSCQESMSESLRTCYIYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALD
TVEDDMSIPLEKKVPLLHNFHNFLYDPEWNFTESQEKDRQVLEDFPTISVEFRNLGQEYR
EVISDICHCMGVGMAEFLEKKVGSMKEWDKYCHYVAGLVGIGLSRLFSASQLEDPEVGQD
TELANSMGLFLQKTNIIRDYLEDQQDGRAFWPKEAWSQFANHLEDFAKPRHLDSALACLN
LLVTDALRHVPDVISYLTRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGVVKIRKGQ
AVTLMMQATNMGAVRSIISQYSQEILQKVSLTDPSRDKTLLILQLIREKTLSQDMLPSRA
HHLSPVYLSAAMLLAALSWQYLSATAGQAAGGADMQGH
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctggaccttgttgcaagagtacggtgtactttttagtgttgaagcgtagtctctcg
gtccctccccgaagctccgtaactgctgcgcgacctacgctctccgctggcaggctgggc
gagcgaggtgtccaggaagggtgttgggccgcccgtccgaatgccctcagaacggctggt
tcttaccgacaccccgtatttctgtgtttctcctgccaggaatctatgagcgagagcctg
cgaacatgttatatttatttgaatcagacaagccggagtttcgcagccgtaattcaagcg
ttggacggagagttacgtcatgcagtgtgtattttctacctggtcctacgggctctggac
acagtggaagatgacatgagtatcccactcgagaagaaggtgcccctgctgcacaacttc
cacaacttcctgtatgatccggagtggaacttcacagagagccaggaaaaggaccgacaa
gtgctggaggacttccccacgatttcggttgagttccgcaatctgggccaggagtatcgg
gaggtgatatctgatatctgccactgcatgggagtaggaatggctgagttcctggaaaag
aaagtaggctcaatgaaggagtgggacaagtactgtcactatgtggctgggctggtgggc
attgggctgtcccggctcttttcggcctcccagctggaggatcctgaagttgggcaggac
actgagttggccaactccatgggcctctttctgcaaaagaccaacattattcgagactac
ctggaagaccagcaggatggacgggccttctggccaaaggaggcttggagccagtttgcc
aatcacctggaagactttgccaagccacggcatctggactccgctctcgcctgcctgaac
ctgctggtgactgatgccctccgacacgttccagatgtcatcagctacctgacacgcctc
cgtaaccagagcgtctttaacttttgtgccatccctcaggtcatggccatagccacactg
tccgcatgttacaacaacccacaggttttccaaggagtggtgaagattcggaagggccag
gctgtaacgctcatgatgcaggcaaccaacatgggtgctgtacggtccatcatctctcag
tacagccaggagattctacagaaggtgtccctcactgacccatctcgggacaagacactg
ctgatcctgcagttgatccgtgaaaagactctatcccaggacatgctcccgtcccgtgca
caccacctgtcccccgtctacctgtcagccgccatgctgctagctgccctgagctggcag
tatctgagtgccacagccgggcaagccgcagggggtgcggacatgcagggccactag
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