Anguilla anguilla (European eel): 118230278
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Entry
118230278 CDS
T07545
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aang03041
]
118230278 (ddx1)
03016 Transfer RNA biogenesis [BR:
aang03016
]
118230278 (ddx1)
Enzymes [BR:
aang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118230278 (ddx1)
Spliceosome [BR:
aang03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118230278 (ddx1)
Transfer RNA biogenesis [BR:
aang03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
118230278 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
118230278
NCBI-ProteinID:
XP_035279036
LinkDB
All DBs
Position
6:complement(55443614..55452940)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIGQAAEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGRASVKTGGAVMNKWQMNPYDRSTAFAIGPDGMCCQSREFKEWH
GCRSTKAVTKGKYYYEVSCHDQGLCRVGWATAKAALDLGTDKYGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDLDNGHLLFSKNGKELGLAFEIPAHLKNEPFYTACVLKNAELKF
NFGEEDFKFTPKEGFVALCQAPEKYSVKSTQSGSAQVSQVKNMSNAPKALIVEPSKELAE
QTLHVVNQFKKYVDNPHLRDLLIIGGVAAKEQLSVLEQGVDIVVGTPGRLDDLISTGKLN
LSQVRFLVLDECDGLLSAGYTDFIMRIYNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKTDRLWEKLGKNHIQTDEVHAKDNTRPGTN
SPEMWSEAIKILKGEYVVRAVKEHKMDQAIIFCRTKIDCDNMEQHFIKQGGGPDRKGHQL
SCVCLHGDRKPQERKQNLERFKRQEVKFLICTDVAARGIDIRGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISMVAMEKEKVWYHVCASRGKGCTKTWLKEDGGCTIWYNEKELLS
EIEEHLKCTITQCEPDIKVPVDEFDGKVTYGQRRATGGGMYKGHVDVLAPTVQELASLEK
EAQTSFLHLGYLPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttttctgaaatgggtgtgatgcctgagattggtcaggcggcggaggaaatg
gactggctacttccaacagacattcaggctgagtccattcctttaattcttggaggagga
gatgtgctcatggctgcagagaccggtagtgggaagactggggccttcagcattccagtc
attcagatcgtgtatgaaacactgaaggaccagcaggaggggaagaaggggagagcttcg
gtcaagacgggcggtgcagtgatgaacaaatggcagatgaacccatacgacagaagcacg
gcttttgcgattggtccagatggaatgtgctgccaaagcagagagttcaaggagtggcac
gggtgtcgctccacaaaagcagtgacaaaggggaagtactactatgaagtatcttgccac
gaccaaggtctgtgccgagtggggtgggccacagccaaagctgccctggatttaggcacg
gataaatacggatttggatttggaggaacggggaagaagtctcacaacaagcagtttgat
agttacggagaggaatttaccatgcatgacaccataggatgctacctggacttggataat
ggtcatttgttattttccaaaaatgggaaggagttgggtttggcttttgagatcccagcg
catttaaaaaatgagccattctacactgcttgtgtcttaaagaatgccgagctgaagttt
aatttcggcgaagaagacttcaaattcacccccaaagaaggcttcgtggctctgtgccag
gctccggagaagtatagcgtgaagtcgactcagtcaggaagtgcccaagtgagtcaggtg
aagaacatgtccaatgcgccgaaggccctcatcgtggaaccatcgaaagagcttgccgag
cagacgctccacgtcgtcaaccagttcaagaaatacgtggataatcctcacctgagggac
ctgttaatcatcggaggcgtggccgccaaagaacagctctccgtcctggaacaaggggtc
gacatagttgttggaacgcccggtcgactggatgacctcatctcgaccggaaagctgaac
ctctctcaagtgcggttcctggttctggatgaatgcgatgggctcctctcagcaggatat
actgatttcatcatgagaatctacaaccagattccccagattacatctgatggaaagaga
ttacaggtgatcgtgtgctcggcgacgctgcactccttcgacgtgaagaagctgtcggag
aagatcatgcacttccccacctgggtggacctgaagggcgaggactccgtgccggagacg
gtccaccacgtggtggtgcccgtcaaccccaaaaccgaccggctgtgggagaagctcggc
aagaaccacatccagacggacgaagtgcacgctaaggacaacacgaggcccggcaccaac
tcgccagaaatgtggtctgaggccattaaaatcctgaagggggagtacgtcgtcagagcc
gtcaaagagcacaagatggatcaggccatcatcttctgcaggaccaaaatagactgcgac
aacatggagcagcacttcatcaagcagggtggaggaccggacaggaaaggacaccagtta
tcctgcgtctgtctccatggagacaggaaaccccaggagcgcaagcagaacctggagcgg
ttcaagagacaggaagtgaagttcttgatctgcaccgacgtggcggcgcgagggatcgat
atccgcggcgttccgtacgtgatcaacgtcactctgccggatgagaagcagaactacgtt
caccgtatcggaagggtggggagagctgaaaggatgggtttggccatatcgatggtggct
atggagaaggagaaggtgtggtaccatgtgtgtgccagcagggggaagggctgcaccaag
acctggctgaaggaggatggaggatgcaccatatggtacaatgagaaagagctcctgtcc
gaaatcgaggagcacctgaagtgcaccatcacccagtgcgagccggacatcaaagtgccc
gtggacgaattcgacgggaaggtgacctacggccagaggagggccaccggaggtgggatg
tataagggtcacgtggacgtgctggcccccacggtccaggagctggccagtctggaaaag
gaggcccaaacatccttcctgcatctgggctacctacccaatcagctgttcagagctttc
tag
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