Anguilla anguilla (European eel): 118231212
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Entry
118231212 CDS
T07545
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03020
RNA polymerase
aang03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118231212 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
118231212 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aang03021
]
118231212 (polr2b)
03400 DNA repair and recombination proteins [BR:
aang03400
]
118231212 (polr2b)
Enzymes [BR:
aang01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118231212 (polr2b)
Transcription machinery [BR:
aang03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
118231212 (polr2b)
DNA repair and recombination proteins [BR:
aang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118231212 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
118231212
NCBI-ProteinID:
XP_035280731
LinkDB
All DBs
Position
7:25180101..25193786
Genome browser
AA seq
1174 aa
AA seq
DB search
MYDQDEDIQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSSIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEVLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENDDDLDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMCIAPRMMTN
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatcaagatgaagatatccagtacgatgaagatgatgacgaaatcactcctgat
ttgtggcaggaagcttgctggattgtcatcagctcctactttgatgagaagggcctggtg
cggcaacagctggactccttcgacgagttcatccagatgtcagtccagaggatcgtggag
gacgccccacctatcgacctgcaggctgaggctcagcacacatcaggggaggtggaggaa
ccgccacggtacctgctgaagtttgaacagatttacctgtccaaacccactcactgggaa
agagatggagcgccttcgcctatgatgccaaatgaagctagactccgcaacctcacgtac
tcagcacccttgtacgtggacatcaccaagaccatcattaaagagggggaggagcaactg
caaactcagcaccagaagaccttcatcggcaaaattcccatcatgctccgctccacgtac
tgcttactgagcggcctgactgaccgtgatctgtgtgagctcaacgagtgcccgctggac
cccgggggttacttcatcatcaacggctccgagaaggtcctgattgcccaagagaagatg
gccacgaacacggtgtacgtcttcgccaagaaggactccaagtacgcctacacgggggag
tgccggtcctgcctggagaactcgtcccgccccaccagctctatctgggtcagcatgatg
gccagggggggccagggtgtgaagaagagcgccattggtcagaggatcgtctccaccctg
ccctacatcagacaggaagtgcccatcatcattgtgttccgcgccctgggcttcgtgtct
gacagagacatcctggagcacatcatctacgacttcgacgatcccgagatgatggaaatg
gtgaagccgtccctggatgaggcctttgtgatccaggagcagaacgtagcgctgaatttc
attggctctcgcggtgccaagcccggcgtcaccaaggagaagaggatcaagtacgccaag
gaggtcctgcagaaggaggtgctgccccacgtgggagtcagtgacttctgtgagaccaag
aaggcctacttcttagggtacatggtccacaggctgctgctggccgccctgggcagaagg
gagctggacgacagggatcactatggcaacaagaggctggatctggccggtccgctgctg
gccttcctgttccgagggatgtttaaaaacctgctgaaggagatcaggatctacgcgcag
aagttcatcgacagagggaaggatttcaatctggagctggccatcaagacccgcatcatc
tctgacgggctcaagtactccctggccaccgggaactggggcgacgtgaagaaggcccat
caggccagagcgggggtgtcccaggtgttgaaccgcctcaccttcgcctccaccctgtcc
cacctccggcgcgtcaactcccccattgggcgggacggcaagctggccaaaccccggcag
ttgcacaacaccctgtggggcatggtgtgccccgccgaaaccccagagggccacgctgtg
gggctggtgaagaacttggcactcatggcctacatctctgtgggctcccagccctccccc
atcctggagttcttggaggagtggagcatggagaacctggaggagatctccccagccgcc
atcgctgacgccacgaagatctttgtgaacgggtgctgggtggggatccataaggacccg
gagcagctgatgaacactctgaggaagctccggagacagatggacatcatcgtgtctgag
gtgtcgatgatcagggacatccgggagagggaaatccgtatctacacagatgcagggagg
atttgtcgccctctgctgatcgtggagaaacagaagcttctgctgaagaggaggcatatt
gaccagctgaaggaaagagagtacaacaattacagctggcaggacctggtggccagcggg
gtggtggagtacatcgacacgctggaggaggagaccgtgatgctggctatgacccccgat
gacctacaggagaagggcgtggcctactgctccacctacacacactgcgagatccacccc
tccatgatcctgggcgtgtgcgcctccatcatccccttccctgatcacaaccagtcgccc
aggaacacgtaccagtccgctatgggtaaacaagccatgggcgtgtacatcaccaacttc
cacgtgcgcatggacaccctggcccacgtgctgtactacccacagaagcccctggtgacc
acccgctccatggagtacctgcgcttcagggagctgccagcaggcatcaactctatagtg
gccattgcctcgtacactgggtacaatcaggaagactcggtcatcatgaaccgttctgcc
gtcgaccgtggtttcttcaggtccgtgttctaccgctcgtataaggaacaggaatccaag
aagggctttgaccaggaggagatttttgagaaacccacacgtgaaacttgtcaaggcatg
cggcacgccatctacgacaagctggacgacgacgggctgatcgcgccgggcgtgcgcgtc
tccggggaggacgtgatcatcggcaagacggtgacgctgccggagaacgacgacgacctg
gacagcaccaaccggcgctacaccaagcgcgactgcagcaccttcctccgcaccagcgag
accggcatcgtggaccaggtcatggtcaccctcaaccaggagggctacaagttctgcaag
atccgggttcggtccgtgcgcatcccccagatcggagacaagttcgccagtcggcacggg
cagaagggaacctgcggcatccagtacaggcaggaggacatgcccttcacgtgtgagggc
atcacccctgacatcatcatcaacccccacgccatcccctctcgaatgacagtcggccat
ttgatcgagtgtttgcaggggaaggtgtccgccaacaaaggcgagatcggcgacgccacg
ccgttcaacgacgccgtgaacgtgcagaaggtctccaacctgctgtccgagtacggctat
cacctgagaggcaacgaggtgctgtataacggtttcaccggccgcaagctcacctcccag
atcttcatcgggcccacctactaccagcgcctcaagcacatggtggacgacaagatccac
tccagggcccgcgggccggtgcagatcctcaaccggcagcccatggagggccgatcccgg
gacgggggcctgcgtttcggggagatggagcgggactgtcagatcgcccacggggcggcg
cagttcctgcgggagcggctgttcgaggcctcggacccctaccaggtgcacgtgtgcaac
ctgtgcggcctgatggccatcgccaacacccgcacgcacacatacgagtgccggggctgc
cgcaacaagacccagatctccctggtccggatgccctacgcttgtaagctcctcttccag
gagctcatgtctatgtgtatcgcgcctcgtatgatgaccaactag
DBGET
integrated database retrieval system
