Anguilla anguilla (European eel): 118231691
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Entry
118231691 CDS
T07545
Symbol
dicer1
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aang03036
]
118231691 (dicer1)
Chromosome and associated proteins [BR:
aang03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
118231691 (dicer1)
microRNA pathway
RISC loading complex
118231691 (dicer1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Dicer_PBD
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
dsrm
Motif
Other DBs
NCBI-GeneID:
118231691
NCBI-ProteinID:
XP_035281664
LinkDB
All DBs
Position
1:10846111..10877080
Genome browser
AA seq
1878 aa
AA seq
DB search
MAGLQLVTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGK
TFIAVLLTKELSHQIRGDFRECGRRTIFLVNAASSVIQQAATVRTHSDLQVGEYVSLENT
LSWTEEKWNQEMIENQVLVMTCHLFLHVLRNGVLPLSKINLLVFDECHLAIMDHPYREIM
KICEGRPCSPRILGLTASILNGKCDPSELEEKIQNLERILKSTAETATDLVVLDRYASQP
REVVLDCGPYLDKSGLCERLLNELDEALRFLNDCNVSAQREDRDPTFISKQVLSDCRAVL
TVLGPWCADKVAGIMVRELQKYIKHEQEDLNRKFLLFTDTILRKIHALCEEHFSPASLDL
KFVTPKVIRLLEILHEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEVKEKP
EANFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNQPR
NKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSK
GRARAPVSNYIMLADTERTKAFEEDLKTYKAIEKILRNKCSKSPESSEFEVEPVLDDDNI
LPPYVLRSEDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCKTAQLPDGAYRSTLYLP
INSPLRVPVTGPTMNCARLAEKAVALLCCEKLHKIGELDDHLMPVGKETVKYEEELDLHD
EEETSVPGRPGSTKRRQCYPKAIPECLRNSYPVPEQSYYLYVIGMVLTTPLPDELNFRRR
KLYPPEDTTRCFGILTAKPIPRIPHFPVYTRSGEVTISIELQKSGFTLSAPQLELITRLH
QYIFSHILRLEKPALEFKPTEADSAYCVLPLNVVEDSNTLDLDFKFMEDIEKSEARIGIP
NTQYTKQNPFTFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAE
YYKTKYNLDLSNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNK
QILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTAIDAGVGVRTLPPDFR
YPNLDFGWKKSIDSKAFISSPSACTEDDYCKHSPTVAPDDAAHQGVHPEASSPHGGAIAP
AENPEPAPPQDEEKRDCVCAGNLANGTAEDGDGGGLGGRHDCQRSPPDSPEGEIPVQSTT
SAHVQHSQSTESQPQPGVECTPGSNSDFDGHTTIPTSDRRQVVDVTAGSAAPSDAXPPSA
GSDSPKTLGPNPGLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGR
LSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYVVNQDKSSMDKWDSEMK
GDPLANGRAEEDYDEDEDEGDDVEEDEELMWKEPKDEVSVEDDLEYYQEHIKFIDNMLIG
SGAFGKKISLSSFPPAEPSYEWKAPKKPHLPNAHLAPDGDEFDYSSWDAMCYLDPSKAGE
EDDFVVGFWNPSEENCGTDTGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAA
QMFLCSLGLKVLPAVKRGPGDGGGGAGERSKELQYGWLKIPPRCMFDHPDAERTLNHLIS
GFENFEEKISYTFQNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDP
RQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQG
MDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSRMSLETVWQVYYPMMRPLIEK
FSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAA
ARRALRSLKANQPQVQNS
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggcaggactgcagctcgtgacccccgcttcctcgcccatgggacccttctttggtctc
ccgtggcaacaggaggccatccacgacaatatttacacaccaaggaaatatcaggttgaa
cttcttgaagcagctctggaacacaatactatcgtttgtttaaatactggctcagggaag
acctttattgcagtactccttacaaaagagctctcccatcaaatccggggagacttcaga
gaatgtgggaggaggaccattttcttggtgaatgcagcatcgtctgtgatccagcaagca
gctactgttcggacccattcggaccttcaggtgggagaatatgtcagccttgagaacaca
ctgtcatggaccgaagagaagtggaaccaggaaatgatcgagaaccaggtgcttgttatg
acatgccacctcttcctgcacgttctgaggaacggagtcttgccactatcgaaaatcaac
ctgctggtgtttgatgagtgtcaccttgcaatcatggatcatccctatcgggaaataatg
aagatatgcgaggggcgcccgtgcagtcctcgaatcctgggtctgaccgcttccatttta
aatggcaaatgtgacccgtcagagctggaggagaagattcagaacctggagaggatcttg
aaaagcaccgcagaaactgctactgacctcgtcgtcctggataggtacgcctctcagccc
cgggaggtggtgctggactgcgggccctacctggataagagcgggctctgcgagcggctc
ctgaacgagctggacgaagcgctccgcttcctcaacgactgcaacgtatcggcccagcgc
gaggaccgcgaccccaccttcatctccaaacaggtgctgagcgactgcagagcggtcctc
accgtgctggggccctggtgcgcagacaaggtggcgggcatcatggtgagggagctgcag
aagtacatcaagcacgagcaggaggacctgaaccgcaagttcctgctgttcaccgacacc
atcctgcgcaagatccacgcgctctgcgaggagcacttctccccggcctccctggacctc
aagttcgtgacgcccaaggtgatccggctgctggagatcctgcacgagtacaagcccttc
gagaggcagcagttcgagagcgtggagtggtacaacaaccgcaaccaagacaactacgtc
tcctggagcgactcggaggacgacgacgaggacgaggagatcgaggtgaaggagaagccc
gaggccaacttcccgtcgccgttcacgaacatactgtgcgggatcattttcgtcgagaga
cgctacacggcggtcgtcttaaacaggcttataaaggaggcaggaaaacaggaccctgaa
cttgcctacataagcagcaacttcattaccgggcacagcattggcaagaaccagcctcga
aacaaacagatggaggttgagtttcgcaaacaggaggaggtccttcggaaatttcgcgcg
cacgagaccaacttgctgatcgcaaccagtattgtggaggagggagtcgatattccaaag
tgcaatttggtggttcgatttgacttgccaacggagtaccgctcgtacgttcagtccaaa
gggagggctcgagcgccagtgtccaattacattatgctggccgacacggagagaacaaaa
gcgttcgaagaggacctgaaaacgtacaaggcaatcgaaaagatcctgaggaacaaatgc
tccaagtcgccggagagcagcgagttcgaggtggagcccgtgctggacgacgacaacatt
ttacctccctacgtgctgcgctccgaagatgggggccccagggtcaccatcaacacggcg
attggccatgtcaacagatactgcgcgagactgcccagcgaccctttcacgcacctggcc
cccaagtgcaagactgcgcagctgccggacggagcttaccgatccacgctctatctcccc
attaactcccctctcagggtccccgtcactgggcccacaatgaactgtgcaagacttgct
gagaaagcagttgctcttctttgctgtgaaaagctacacaaaataggtgaattagatgat
cacttgatgccggtggggaaggagactgtgaaatacgaggaggagctggacttgcacgac
gaggaggagaccagcgtcccgggcagaccaggatcaaccaagaggaggcagtgctacccg
aaagcgatcccagaatgtcttcggaacagttaccctgtgccagagcagtcctactacctg
tatgtgatcgggatggtcctgacgacccctctgcccgacgagctcaacttccgcaggagg
aagctctaccctcccgaagacaccaccagatgcttcggcattctgacggcaaaaccaata
cctcggattccccacttcccggtgtacacgcgctcgggggaggtgaccatctccatcgag
ctgcagaagtcggggttcaccctgagcgccccccagctggagctgatcacgcgcctgcac
cagtacatcttctcccacatcctccgcctggagaaacccgccctggagttcaaacccacc
gaggccgactccgcctactgcgttctacctcttaacgtggttgaggattccaacacttta
gacttggactttaaattcatggaagatattgaaaaatctgaagcacgcataggcattccg
aacacccagtacaccaaacagaacccattcactttcaaattggaggactaccaggatgca
gtcatcattccaaggtatcgcaactttgaccagcctcaccgcttctacgtggcggatgtc
tacactgatctcacaccactgagcaagttcccttcaccagaatatgaaaccttcgccgaa
tactacaagaccaagtacaacctcgacctgtccaacctgaaccagccactgctggatgtg
gaccacacatcctcacgactgaatcttctgactcctcgacaccttaatcagaaaggcaaa
gcccttccgctcagcagtgctgagaaaaggaaggccaagtgggagagtctgcaaaacaaa
cagattttggttcctgaactgtgtgccatccacccgatccctgcctccttgtggagaaaa
gcggtctgccttcccagcatcctctaccgacttcactgccttctgacggccgaggaactc
cgggctcagacagccatcgacgccggtgtgggggtccgaaccctgccgccagacttcaga
tacccaaacttggatttcgggtggaagaaatccatcgacagcaaggccttcatctcaagc
cccagcgcctgcacggaagacgattactgtaagcacagcccaactgtagcccctgacgat
gctgcccatcaaggtgttcatcctgaagcctcctcgccacacgggggcgccatcgcgccc
gccgaaaatccagagcccgccccgccgcaggacgaagagaagcgcgactgcgtctgtgcc
gggaacctcgccaacggcacggcggaggacggcgacggcggcggcctcggcggacgccac
gattgccaacgttccccgccagactcgcccgagggcgaaatacctgtacaaagcactacc
tcagctcacgtgcaacactctcagagcactgagagccagccccagcccggcgttgaatgt
actccagggagtaactcagactttgacggacacacgacgatacctacctcagaccgtcgc
caggtggtcgatgtgacagccggttccgcagcaccttcggacgccnnccccccctcggcc
ggcagcgactccccgaaaaccctggggcccaaccccggcctcatcctgcaggccttgacc
ctctccaacgccagcgacggctttaacctggagaggctggagatgctgggcgactccttc
ctgaagcacgccatcaccacctacctgttctgcacgtaccccgacgcccacgagggacgc
ctctcctacatgcgcagcaagaaggttagcaactgtaacctgtatcgtctggggaaaaag
aaaggcctgccaagtcgaatggtggtctccatttttgatccacccgtgaactggctgccc
ccggggtatgtagttaaccaggacaaaagcagtatggacaagtgggactccgagatgaaa
ggggatcccctggccaacggaagagccgaggaggactacgacgaggacgaagacgagggc
gacgacgtggaggaggacgaggagctgatgtggaaggagccgaaggacgaggtgagcgtg
gaggacgacctggagtactaccaggagcacataaagttcatcgacaacatgctgatcggc
tcgggagccttcggcaagaagatctccctgagcagcttccctccggccgagcccagctac
gagtggaaggcccccaagaagccccacctgcccaacgcccacctcgccccggacggcgac
gagttcgactacagctcctgggacgccatgtgctacctggaccccagcaaggcgggcgag
gaggacgacttcgtggtgggcttctggaacccgtcggaggagaactgcgggacggacacg
ggcaagcagtccatctcctacgacctgcacacggagcagtgcatcgccgacaagagcatc
gccgactgcgtggaggccctgctgggctgctacctgaccagctgcggggagcgcgccgcc
cagatgttcctctgctcgctggggctcaaggtgctgccggcggtgaagaggggccctggc
gacggcggcggtggggccggcgagcgctccaaagagctgcagtacggctggctcaagatc
ccgccgcgctgcatgttcgaccacccggacgccgagcgcacgctcaaccacctgatctcc
ggcttcgagaacttcgaagagaagatcagctacactttccagaacaaggcctacctgctg
caggctttcactcacgcctcataccattacaacaccataacagattgttaccaacggttg
gagtttctcggcgatgcaattttagactacctcataacaaagcacctttatgaagaccct
cgacagcattcgcccggtgtgctgaccgacctgcggtccgccctggtcaacaacaccata
ttcgcctctctggccgtcaagtacgactaccacaagtacttcaaggcggtctcgcccgag
ctgttccacgtgatcgacgactttgtgcaatttcaactggaaaagaacgaaatgcaaggg
atggactcggagcttcgccgctctgaagaagatgaagagaaagaagaggacattgaagtt
cccaaagcaatgggagatatctttgaatcacttgctggtgcaatttacatggatagcagg
atgtcactggagactgtttggcaagtgtattatccaatgatgaggccacttatagaaaaa
ttctctgctaatgtccctcgctctcccgttcgtgaattgctggaaatggagccggagacg
gccaagttcagcccggcggagaggacgtacgatggcaaagtgcgggtgacggttgaggtc
gtgggcaagggcaagttcaaaggcgtgggccgcagctacaggatcgccaagtccgccgca
gcacggcgggccctgcgtagcctcaaagcgaatcaacctcaggtccagaacagctga
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integrated database retrieval system
