Anguilla anguilla (European eel): 118231892
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Entry
118231892 CDS
T07545
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118231892
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118231892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
118231892
NCBI-ProteinID:
XP_035282132
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All DBs
Position
7:complement(26115085..26311612)
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AA seq
670 aa
AA seq
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MKALEARGNSRCSESMEREPGSYKRQYCCRTFASVISLLFSVVSVAYCILLSVQTSEIRQ
RVVELETTGNGEIQYHQVPGFSMDQLNSLVRERVDQLLSQRTYEHLAKIRSAREAPPECN
CPPGLPGKRGRRGRDGVPGPPGPPGPKGDKGDQGDQGPRMVFPKINHGFLSADQQLIRRR
LIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGVPGLPGEPGNPGEMGLMGPEGPPGPK
GPPGIPGADGLKGEIGERGEKGDMGDDGQKGEVGQKGDAGSSAAGIKGEPGEPGRGGHKG
EPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPGTKGERGEMGPPGKGERGLMGPVGQKGT
QGEPGTPGYKGVKGETGEKGERGFLGLRGPPGLKGDQGATEIIDYNGNIQEALQKITTFT
VTGPPGPPGPLGPPGLKGERGAPGLPGLDGERGLKGSKGDAGVPGFSGEKGSLGLPGLPG
VNGLKGDKGDTGLPGSQGPSIIGPPGSPGPHGPPGPMGPHGFPGPKGESGLNGLKGVRGE
PGHKGDRGPLGLPGASGLDGKPGIRGMDGPAGPAGPAGPKGDIGERGSAGEPGPRGPYGL
PGAVGTPGLDGLPGLRGEKGDTGERGEKGEKGKKGKKGPKGEKGEQGAPGLDAPCPLGPD
GLPMPGCWQK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctttggaggctcgaggaaactcaaggtgcagtgaaagcatggagagggaacca
gggtcttacaaacggcagtactgctgtaggaccttcgcaagtgtaatttcgcttttattt
tctgttgtgtccgtcgcctattgcattcttctgagtgtacaaacatccgagatcagacag
agggtcgtggaattggaaacaactggaaacggagagattcagtatcaccaggttcccggc
ttttccatggatcagcttaattcattggtacgggagagagtggatcaacttctgtctcag
aggacatacgaacatttggccaaaataaggtctgctcgagaagctccacctgagtgcaac
tgtccaccaggcctgccaggaaagcgcggaaggaggggtagagatggcgtgcctggacct
cctggtcccccaggtcctaaaggagacaagggggaccaaggtgaccaggggccacggatg
gtcttccctaagatcaatcacggctttctttccgctgatcagcagcttattagacgccgg
ctcattaagggagatcagggacaggctggtcccccggggcccccaggcccccccggacct
cgagggcccccaggtgacacaggtaaagacggtcccagaggagtcccaggacttccggga
gagccagggaacccgggcgaaatggggctgatgggaccagagggacctccaggacccaag
ggtccacctgggattccaggtgctgatggactgaagggcgaaattggagagcgaggtgaa
aagggtgacatgggagatgatggccagaagggtgaagttggtcagaagggagatgcagga
tcatctgcagctggcatcaagggtgagccgggcgagccaggaagaggaggccataaggga
gagccaggacttccagggctgcctggacttcccgggataaagggtgaacctggatttcta
ggcccccagggagagccaggattgccagggctcccaggaaccaagggcgagcgcggggag
atggggccgccagggaaaggagagcgagggctgatggggcctgtgggacagaagggaaca
caaggggagcctggaacccctggttacaaaggagtaaagggcgaaacgggggagaaaggg
gaacgaggattcttggggctgagaggcccccccggactgaagggtgaccagggggcgacc
gagatcatcgactacaacggaaacatccaggaggccctgcagaagattaccacatttaca
gtgacgggtcctccagggccacccggacctcttggaccaccaggactgaagggggagcgc
ggggcacctggtctcccaggcctggacggggagaggggtctgaagggctctaaaggagat
gcaggggtccctggtttttccggagagaaggggagtctgggattgcctggtctgcctggc
gttaacgggctgaagggcgataaaggggacacaggactgcctgggtctcagggaccttcg
atcatcggcccccctggatctcccggcccccacggccccccagggcccatgggaccccat
ggttttccaggtcctaagggagaatcagggctgaatggtctaaaaggggttcgaggggag
cctggccacaagggcgatcgagggcccctgggcctccctggggcgtctggcttggacggc
aagcctggaattaggggaatggatggacctgcaggtccagctggcccagccggacccaaa
ggtgacataggtgagcgaggatcagctggtgaacctgggccaagaggaccgtacggatta
cctggagcagtggggacacccggattggatgggttaccaggattaaggggcgagaaaggt
gacactggagagagaggagaaaagggggagaagggaaagaaggggaaaaaagggcctaag
ggggagaaaggagaacagggtgcccctggattagatgccccctgcccattgggccctgat
ggtctaccaatgcctggctgttggcagaagtga
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