Anguilla anguilla (European eel): 118232220
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Entry
118232220 CDS
T07545
Name
(RefSeq) CCR4-NOT transcription complex subunit 4-like isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118232220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aang03000
]
118232220
03019 Messenger RNA biogenesis [BR:
aang03019
]
118232220
04121 Ubiquitin system [BR:
aang04121
]
118232220
Enzymes [BR:
aang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118232220
Transcription factors [BR:
aang03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
118232220
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118232220
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118232220
Ubiquitin system [BR:
aang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118232220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
Torus
DZR_2
Nup35_RRM_2
zf-CCCH_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
118232220
NCBI-ProteinID:
XP_035282879
LinkDB
All DBs
Position
7:complement(2391652..2412920)
Genome browser
AA seq
801 aa
AA seq
DB search
MSRSPDVKDDSMECPLCMEPLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSAEELQRIKNEKKQKQNERKQKMTENRKHLASVRVVQRNLLFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYLRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKSMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKMNPNFLQTSSVGGEKTKGKSCSSQRPNSSSREAWPSLQMGKTANGLGTDHRKSP
PLLDGSSDSDHLTPDGPESDLGLGLGLPPFSTSCDLASPSDRPPESISIGNGETLQQIPN
SDSPSPPPGLPKPSLAIPPKPNLAIPPKPSLAPVGVPEGAARSPFPGGAAESQSLFSDNS
NFRHPNPIPGGLPAFPSAPQGHPDWPTAPEPQSLFTSDTIPVSSSTDWQAAFGFGSSKQT
EDDLGFDPFDVTRKALADLIEKELSVQDPLPLSPGGFLHGPFNGPLNGPRAKAGPGGGGG
LPNPAHLPQRLSQFQHRALCGSLSFPSQHGRHPWIGLPLHSNLLHLNHMASAGGNSGFLD
LSLPPHHSTGLGGIPITENSTSVESINVKEWQDGLRALLPNININFGGLPNSSSSSSSSS
SSSSVNHTGVPGGSGGVAHSLSWDATASWMDPAIITGIPASSANSLDSLHDDNPPHWLKS
LQTLTEMDAPGSVGPPQPPHSGLFGGTQIPPLHRPGWAPYPAPPPASASQFHSPPPGFQT
AFRPPAPPPTELLQSAAMDRH
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcagccctgacgttaaggacgactccatggagtgcccgctgtgcatggagccc
ctggagatcgacgacgtcaacttcttcccctgcacctgcggctaccagatctgccgcttc
tgctggcaccgcatccgcaccgacgagaacgggctctgccccgcctgcaggaagccttac
ccagaagacccggcggtgtacaagccgctgtccgcggaggagctgcagaggataaagaac
gagaagaagcagaagcagaacgagcgcaagcagaagatgacggagaacaggaagcacctg
gccagcgtgcgcgtggtgcagaggaacctgctgttcgtggtgggcctgtcccagaggctg
gccgaccccgaggttctgaagaggccggagtattttgggaagtttgggaagatccataaa
gtcgtcatcaacaacagcacttcatacgcaggctcacagggtcctagtgccagtgcgtat
gtgacctaccttcggtctgaagacgctctcagggcgatacagtgtgtcaacaacgtcgtg
gtcgacggcaggacgctcaaggcttctttaggtacaacaaaatactgcagctacttcctg
aaaagcatgcagtgccccaagcctgactgcatgtacctgcacgagctgggggacgaggcg
gccagcttcactaaggaggagatgcaggcggggaagcaccaggagtatgaacagaagctg
ctacaggagctctacaaaatgaaccccaacttcttacagacctcatcagtgggtggcgag
aagaccaagggcaaatcctgctcttcacaaagaccgaacagcagcagcagagaggcgtgg
ccatcgttacagatgggcaaaacggccaatgggctgggcacagaccaccgcaagagcccg
cccctcctggacggcagctcggactcggatcacctgaccccggacgggcccgagtcggac
ctgggcctgggcctgggcctgccccccttctccacgagctgcgacctcgccagccccagc
gacagaccccccgaatccatcagtatagggaacggagaaactctacaacagatcccgaac
agcgactccccctcgcccccgccgggcctccccaaacccagcctggcgatcccccccaaa
cccaacctggcgatcccccccaaacccagcctggcccccgtcggcgtgccggagggggcg
gcccgctcgcccttcccagggggcgccgccgagtcgcagtctctcttctcagacaacagc
aacttccggcaccccaaccccatccccgggggcctgccggccttccccagcgccccccag
ggccaccccgactggcccacggcccccgagccgcagagcctcttcacctccgacaccatc
ccggtgtcctcctccacagactggcaggcggccttcgggttcgggtcctccaagcagacg
gaggacgacctcgggttcgacccgttcgacgtcacccgcaaggcgctggccgacctgatc
gagaaggagctctccgtgcaggaccccttgcccctctcgcccgggggcttcctccacggg
cccttcaacgggcccctgaacgggccgcgggccaaggcgggccccgggggcggcggcggg
ctccctaaccccgcccacctgccccagcgcctgtcccagttccagcaccgcgccctgtgc
ggctcgctcagcttcccctcccagcacggccgccacccctggatcggcctgccgttgcat
agcaacctgctgcacctcaaccacatggccagcgccggcggcaacagcggcttcctggac
ctgagcctgcccccccaccacagcaccgggctcgggggcattcctatcacagaaaacagc
acttcagtagagagtataaatgtgaaagagtggcaggatgggcttagagcgctcttaccc
aacatcaacatcaactttgggggtttgcccaactcctcctcttcgtcctcgtcctcgtcc
tcgtcctccagcgttaaccacacaggcgtgccggggggctcggggggggtcgcgcacagt
ttgagctgggacgcgacggccagctggatggaccccgccatcataacaggtatcccagca
tcctcggccaacagtctggactccctccacgacgacaaccctccgcactggctcaaatct
ctgcagacgctgacggaaatggacgctccggggtccgtgggccccccccagcccccccac
agtggcctgttcggcggcacacagataccccccctccacagacccggctgggcgccctac
ccggcccccccgcccgcgtccgccagccagttccactcacccccgcccggcttccagaca
gccttcagacccccagccccaccccccacagagctgctacagagcgcagccatggaccgc
cactag
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