Anguilla anguilla (European eel): 118233560
Help
Entry
118233560 CDS
T07545
Symbol
lig1
Name
(RefSeq) DNA ligase 1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03030
DNA replication
aang03410
Base excision repair
aang03420
Nucleotide excision repair
aang03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118233560 (lig1)
03410 Base excision repair
118233560 (lig1)
03420 Nucleotide excision repair
118233560 (lig1)
03430 Mismatch repair
118233560 (lig1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aang03032
]
118233560 (lig1)
03400 DNA repair and recombination proteins [BR:
aang03400
]
118233560 (lig1)
Enzymes [BR:
aang01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
118233560 (lig1)
6.5.1.6 DNA ligase (ATP or NAD+)
118233560 (lig1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
118233560 (lig1)
DNA replication proteins [BR:
aang03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
118233560 (lig1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
118233560 (lig1)
DNA repair and recombination proteins [BR:
aang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
118233560 (lig1)
NER (nucleotide excision repair)
Other NER factors
118233560 (lig1)
MMR (mismatch excision repair)
Other MMR factors
118233560 (lig1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
DELLA
Motif
Other DBs
NCBI-GeneID:
118233560
NCBI-ProteinID:
XP_035285208
LinkDB
All DBs
Position
8:complement(5912731..5929118)
Genome browser
AA seq
944 aa
AA seq
DB search
MQRTIASFFQPMKGKKKEEETSGPGKERSEPVKSPLKPQNGFPEADSPVKKTSKRSRPII
DSDDEDTVGKEETETEMETAPPAQEKVAAVKSPAQTTPSTPVSSAGVVTAVTPVTPATPA
TPATPTTPSSVSPSGIPKRKTARKQFPKRKLDTANRDEEEGEEEEEQQVVKRAKLETDKS
ESAQATEGNKEEVKKEEVFVKTAEPVGEEEEEGAVKEKSDEESTVKMEEDKPPVKTKPIN
SFFVLAPRKVAVKLEKTEEKRGGGKEVQGEREGEGDEEKESGKGALGCKPAEYDPSRPNY
NPVDHACWSRGQRVPYLAVARTLEKIEEEMGRLKNIETLSNLLRSVLVLSPDDLVCCVYL
CLNQLGPAYLGVELGVGETVLMKAVAQATGRQLDKIKAEAQEKGDLGLVAESSRSNQRMM
FAPANLSAAGVFSKLKDIAKMTGNSSMNKKIDIIKGLFVACRHSEARYIVRSLAGKLRIG
LAEQSVLVALSQAVTLTPPGQDFPPKVLDAGLGKSVESRRSWLEENALILKQTYCEMPNY
DVIIPVLLKEGIKELPKHCKLTPGVPLKPMLAQPTKGVSEVMKRFDEAAFTCEYKYDGER
AQIHILENGGVHIFSRNQEDNTTKYPDIISRIPGVKRESVRSCIVDAEAVAWDREKKQIQ
PFQVLTTRKRKDVDASEIKVQVCVYAFDLLYLNGESLVKEPLSRRRALLKESFEEREGDF
VFAQALDSDSTETIGEFLEQSVRDSCEGLMVKTLEKDATYEIAKRSHNWLKLKKDYLEGV
GDTVDLCVIGAYLGKGKRAGAYGGFLLACYDQENEEFQSVCKIGTGFKDEDLEQHFKFFK
EHVLPKPRSYYRIDQSAEPDVWLEAVQVWEVKCADLSLSPVYKAAMGLVDPVKGVSLRFP
RFLRVREDKKPEDATSSVQVADLYGKQQQIQNQGASKHSLEDYY
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaaccattgcgtctttttttcagcccatgaaagggaagaagaaagaggaggag
accagcggtccaggaaaagagagatctgaaccagtcaaatctccgctcaaaccccagaat
gggtttccggaagccgattcgccggtgaagaagaccagtaagcgcagtcggccaatcata
gacagtgacgatgaggacaccgttgggaaggaagagacggagacggagatggagacggcc
ccgcccgctcaggagaaggtggcggcagtgaagagccctgcccagaccactccctcgacg
ccggtttcctcagctggcgttgttaccgcggttaccccggttaccccagctactcccgcc
actcctgccactcccaccaccccgtcctccgtctcgcctagcgggatccccaaacgcaag
acagcccggaaacagtttccgaagagaaagctggacactgcgaatcgtgatgaggaagag
ggagaggaggaggaagagcagcaggtggtgaagagggccaagctagagacggacaagagc
gaaagtgctcaagccacagaagggaacaaggaggaggtgaagaaggaagaagtgtttgtg
aagacagcagagcctgtgggagaggaggaagaggaaggtgcagtgaaggagaagagtgac
gaagagtcaactgtcaaaatggaggaagataagccacctgttaaaacgaaacccatcaat
agcttttttgttttagcccccaggaaagtggccgtaaagctggagaagacggaggagaag
agaggaggtgggaaggaggtgcagggagaaagagaaggagagggcgatgaggagaaggaa
agcggaaagggcgcccttggctgtaaacctgcagagtacgacccttcacgcccaaactac
aaccctgtggaccatgcctgctggagccggggtcagagggtcccgtacctggctgtggct
cgcaccctggagaagattgaggaggagatgggcagactgaagaacattgagaccctttca
aacctgctgcgttctgtgctggtcctctcaccagatgacctggtgtgctgtgtgtacctc
tgtctgaaccagctgggccccgcctacttaggggtggagcttggcgtgggagagacggtg
ctgatgaaggctgttgcccaggcaacagggcgacagctggacaagatcaaggcggaggcg
caggagaagggggacctgggattggtggccgagagttcccgtagcaaccagagaatgatg
ttcgcgccggccaatctgtcggcggcgggcgtgttcagcaagctgaaggacatcgccaag
atgaccgggaactcttccatgaacaagaagattgacatcatcaagggcctgtttgtggcc
tgcaggcactctgaggcccggtacatcgtcaggtctttggcgggaaagctgcggatcggg
ctggcggagcagagcgtgctggtggcgctgagccaggccgtgaccctcacccctcctggg
caagattttcctccgaaggtcctggatgcaggtttggggaagtctgtggagagcaggcgg
agctggctggaggagaacgccctcatcctgaaacagacatactgtgagatgccgaactat
gacgtcatcattcctgtcctgctgaaggagggaattaaagaactgcccaaacactgcaag
cttaccccaggcgttcctctgaagcccatgctggcccagcccactaagggcgtgtctgag
gtgatgaaacggtttgatgaagccgccttcacctgtgaatacaaatacgatggagagaga
gctcagatccacatcctcgagaacggcggcgtgcacatcttcagccgcaatcaggaagat
aacaccaccaagtaccccgacatcatctccaggataccaggggtgaagagggagtcggtg
cgctcctgtatcgtggacgcggaggctgtggcgtgggacagagagaagaagcagatccag
cccttccaggtgctgaccacgcgcaagagaaaggatgtggacgcgtcggagataaaggtc
caagtgtgcgtgtacgccttcgacctgctctacctgaacggagagtctctggtgaaggag
ccgttgtctcggcggcgagccctgctgaaggagagctttgaggagcgggagggagatttc
gttttcgctcaggcgctcgactccgacagcacggagaccatcggggagttcctggagcag
tctgtccgagactcatgtgaggggctcatggtgaagactctggaaaaagatgctacttac
gaaattgccaaacgctctcacaactggctgaagctgaagaaggactacctggagggcgtg
ggggacacggtggacctgtgtgtgatcggggcctacctgggcaagggcaagagagccggg
gcctacgggggcttcctgctggcctgctacgaccaggagaacgaggagttccagtccgtc
tgcaagattggaacgggtttcaaggatgaggatttggagcagcatttcaagttctttaag
gaacatgtcttacccaaaccccgctcgtattaccgcatcgaccaatcggctgagcctgac
gtttggctcgaggcggtgcaggtttgggaagtgaagtgtgccgacctgtctctgtctccg
gtgtacaaggcagccatgggattggtggacccggtgaagggcgtgtctctccgctttccc
cggttcctcagggtcagagaggataaaaagccggaggacgcgaccagcagcgtgcaggtt
gccgacctgtacgggaagcagcagcagattcagaaccagggagcaagcaaacacagcctg
gaggactactactga
DBGET
integrated database retrieval system
