KEGG   Anguilla anguilla (European eel): 118233842
Entry
118233842         CDS       T07545                                 
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
aang  Anguilla anguilla (European eel)
Pathway
aang03013  Nucleocytoplasmic transport
aang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118233842 (thoc1)
  09122 Translation
   03013 Nucleocytoplasmic transport
    118233842 (thoc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aang03019]
    118233842 (thoc1)
   03041 Spliceosome [BR:aang03041]
    118233842 (thoc1)
Messenger RNA biogenesis [BR:aang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     118233842 (thoc1)
Spliceosome [BR:aang03041]
 Complex C
  Other components
   EJC/TREX
    118233842 (thoc1)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    118233842 (thoc1)
SSDB
Motif
Pfam: efThoc1 Death
Other DBs
NCBI-GeneID: 118233842
NCBI-ProteinID: XP_035285746
LinkDB
Position
8
AA seq 652 aa
MSPSMFHFNDAKDKFTAATRSALDSKTSKSLITVFNQLPGNETEKKTTLDQALRGVLEEE
IVKQKASCDDFLSLIYLSIDGVTEGICSATTPFLLLGDVLDCLPLDQCDKIFTFVEDNVS
TWKSNSFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLDNVTVFNKNEQESTLGQKHTEEKEEGMEEGEMGDEDEPAPCSIPIDYNLYRKFWTLQD
YFRNPVQCYDKFSWMTFLKYSDETLAVFKSYKLDDTQASKRKLEELRTAGGEHVYFAKFL
TSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCSLNDDQCLWMEDTTKLVYQ
LLRETPPDGDKFATMVEHILNTEENWNSWKNEGCPSFVKERPADAKPVRPTRKRQAPEDF
LGKGPDRKIFMGNDELTRLWNLNPDNMEACKSDSREFMPTLEEFFEEAIEQADPANMVED
AYKVVRNSNYGWRALRLLSRRSPHFFQPTNQQFKSLADYLESMVIKLAKELPKDLPSEEI
KTGEEDDDDNGDNLLKESNDSPGIQNKLVSNQQMDEIAAKLGAQWKTLAGQLEMKAVEVR
EIETDSEDVDMQAKLLLVAWQDREGSQATVENLVSALNTAGFPKIAEILTET
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgtctccgtccatgttccatttcaatgatgccaaagacaaatttacagctgcaacaaga
agcgcactggacagcaaaacaagcaagtcccttataactgtattcaaccagctccctgga
aatgagacagaaaagaaaacaacgctggaccaagccctgcgaggagtcctggaggaggaa
attgtgaaacaaaaagccagttgcgatgatttcctgtccctcatttacctgagtatcgat
ggagtcactgaaggcatctgctcagccacgactcctttcctgctattgggagacgtgctg
gactgcctgccactggaccaatgcgacaagatattcacctttgtggaggataatgtgtcc
acttggaaatcgaactcattttattctgcggggaagaattacttgttaaggatgtgtaat
gatctcttgaggaggctctccaagtcacagaacactgttttttgtgggcgaatccagctg
tttctggcccgcctcttccccctgtcagaaaaatcagggttgaatctccagagccagttt
aacctggacaatgtcacagtcttcaacaaaaatgagcaggagagcactctgggccagaag
cacaccgaggagaaggaggaaggtatggaggagggcgagatgggggacgaagacgagcca
gcaccctgctccatccccatcgactacaacctgtacagaaagttctggaccctgcaggac
tacttcaggaaccctgtacagtgctatgacaaattctcctggatgacctttctcaagtac
tctgacgagacgttggcggtgttcaagagctacaagctggacgacacgcaggcctccaag
aggaagctggaggagctgaggacggccggcggcgagcatgtctacttcgccaagttcctc
accagcgagaagttgatggacctgcagcttagcgacagcaacttcaggcgccacattctt
ctgcagtatttaatcctctttcagtatttgaaggggcaggtcaagttcaaaagctccagt
tgcagtctgaatgatgaccagtgcctgtggatggaggacaccaccaaactggtgtaccag
ctgctcagagagactccaccggacggggacaagtttgccaccatggtagagcacatcttg
aacacagaagagaactggaactcttggaaaaatgagggatgccctagcttcgtaaaagaa
aggccagctgacgcaaaacccgtacgccctaccaggaagaggcaggccccagaggacttc
ctgggcaagggccctgacaggaagatcttcatgggaaatgatgaactgacaagactttgg
aacctcaacccagacaacatggaagcctgcaagtcagacagcagggagttcatgcccact
ctggaggagtttttcgaggaggccatcgagcaggccgacccagccaacatggttgaagac
gcgtacaaggtggtgaggaactccaactacggatggagggcactccggctgctgtccaga
cggagcccacacttcttccagccgaccaatcagcagttcaagagcctggcagactacctg
gagagcatggttatcaaactagccaaagagctgccgaaggacctcccctctgaagagatc
aagacgggagaggaggacgacgatgacaacggggacaaccttctcaaagagagcaatgac
agccccgggatccagaacaagctggtatccaaccagcagatggacgagatcgcggccaag
ctgggcgcccagtggaagacgctggcggggcagctggagatgaaggcggtggaggtgcgc
gagatcgagacggacagcgaggacgtggacatgcaggccaagctgctgctggtggcctgg
caggaccgggaggggagccaggccaccgtggagaacctggtctccgcgctcaacaccgcc
ggcttccccaagatcgccgagatcctcaccgagacgtag

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