Anguilla anguilla (European eel): 118234351
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Entry
118234351 CDS
T07545
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118234351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aang03019
]
118234351
03036 Chromosome and associated proteins [BR:
aang03036
]
118234351
Enzymes [BR:
aang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118234351
Messenger RNA biogenesis [BR:
aang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118234351
mRNA degradation factors
5'-3' decay
Decapping complex
118234351
Chromosome and associated proteins [BR:
aang03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118234351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
118234351
NCBI-ProteinID:
XP_035286716
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All DBs
Position
8:50014535..50030053
Genome browser
AA seq
505 aa
AA seq
DB search
MATARTENLASVVVGLNGQMRGQPKPASPQPGPFALGSQPGKAPGAPPKDGIGAQDGGGI
RFGDDWKKNLQLPPKDTRMRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEES
IPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDFIQAMVMVPTRELALQVSQISIQ
VSKHLGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDRVQIMVMD
EADKLLSQDFVVLIEDIISFLAKGRQILLYSATFPISVQKFMAKHLQKPYEINLMDELTL
KGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHA
KMMQEYRNRVFHDFRNGLCRNLVSTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSG
RYGHLGLAINLITSEDRFNLKATEDQLVTDIKPIPGSIDKSLYVAEFHSADAEAEAAGAE
PEAAEAEAEPVAAEAEPQAALLQES
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgcaagaacggagaacctcgcctctgtggtcgtggggctgaacgggcaaatg
agggggcagcccaaaccagcttcccctcagccgggaccctttgcactcggctcacagccg
gggaaggccccaggtgctcctccaaaagatggtattggcgcacaggatggcggtggcatc
aggtttggcgatgactggaagaagaacctgcagctgcctcctaaagatactcgaatgaga
acttcagatgtgaccgctacgaagggtaacgagtttgaggactactgcctgaagcgggag
ctcctgatgggcatcttcgagatgggctgggagaagccctcccccatccaggaggagagc
atccccatcgcgctgtccggcagggacattttggcccgggccaagaacggcacggggaag
agcggcgcctatctcatccccttactggagaggatagacctgaagaaggacttcatacag
gcgatggtgatggtgcccactcgggagctggccctgcaggtcagccagatcagcatccag
gtcagcaagcatctgggcggggtcaaggtcatggccaccacggggggcaccaacctgagg
gacgacatcatgcggctggacgagaccgtgcatgtggtgatcgccaccccaggcagaatc
ctggacctgataaagaagggcgtggccaaagtggacagggtgcagataatggtgatggat
gaggccgataagctgctgtctcaggacttcgtggtcctgatcgaggacatcatcagcttc
ctggccaagggccggcagatcctgctctactcggccaccttccccatcagcgtgcagaag
ttcatggccaagcacctccagaagccctatgagattaacctgatggacgagctcacgctg
aagggcatcacccagtactacgcctacgtcaccgagaggcagaaagtgcactgcctgaac
acgctcttctccaggctgcagattaaccagtccatcattttctgtaactccacccagagg
gtggagctcctggccaagaagatcactcagctgggctactcctgcttctacatccatgcc
aagatgatgcaggagtacaggaaccgcgtgttccatgacttcaggaacgggctctgtagg
aacctcgtaagcacagatctgttcaccaggggcatcgacatccaggctgtgaacgtggtc
atcaactttgacttccccaagaatgcagagacctacctgcaccgcatcgggagatcaggg
aggtatggtcacctgggcctggccatcaacctcatcacctctgaggaccgcttcaacctg
aaggccaccgaggaccagctggtcaccgacatcaagcccatccccggcagcatcgacaag
agcctgtacgtggccgagttccactccgccgacgccgaggcggaggccgcgggggcggag
cctgaggccgcggaggcggaggcggagcctgtggcagcggaggcggagcctcaggccgcg
ctgcttcaggagtcctga
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