Anguilla anguilla (European eel): 118234733
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Entry
118234733 CDS
T07545
Symbol
pdcd6ip
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03250
Viral life cycle - HIV-1
aang03272
Virion - Hepatitis viruses
aang04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118234733 (pdcd6ip)
03272 Virion - Hepatitis viruses
118234733 (pdcd6ip)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118234733 (pdcd6ip)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aang04131
]
118234733 (pdcd6ip)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118234733 (pdcd6ip)
Membrane trafficking [BR:
aang04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
118234733 (pdcd6ip)
Exosome [BR:
aang04147
]
Exosomal proteins
Proteins found in most exosomes
118234733 (pdcd6ip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
RPN13_C
Motif
Other DBs
NCBI-GeneID:
118234733
NCBI-ProteinID:
XP_035287408
LinkDB
All DBs
Position
8:24557393..24579529
Genome browser
AA seq
891 aa
AA seq
DB search
MATFISVPLKKSSEVDMAKSLSKFVKDTYPAGEEQTEYVRAAEELNKLRKSALGRPLDKH
ESSLEILLRYYDQLCAVEHKFPFSENQVCLTFTWKDAFDKGSLFGGSVKLALASIGYEKT
CVLFNVGALASQIASEQNLDSDEGLRAAAKFYQLSSGVFAHIKDTVLSALNREPTMDISP
DTVGTLSQIMLAQAQEVFFLKATSDKMKDAIIAKLANQAADFYGDAFKQCQYKENLPKYF
YFHEVLPVLAAKHCIMQANAEFHQSILAKQQKKFGEEIARLQHATELVKTVASRYDEYVN
VKDLSDKISRALTAAKKDNDFIYHDRVPEVKDLDHIGKAALVKATAVQVPMSQKFTDLFE
KMVPLAVQQAMSMYNQRKSEIVNCLIGTMRESTNLCNGVLASLNLPAALEDLSGDSVPQS
ILEKSRAIIQQGGLQSIEQLIKDLPELMQRNRDILDESLKMLDEEESTDNELRAKFNQRW
SRTPSGDLYKSLRTEGGSYRNFLDKAASADQVVKERYSTHCEMIALLCKPEAELTAAIPS
ANPAKTLQGSEVVNVLRSQLAQLEEVKKEREQLENDIKSAQFDMTSKFLTALAQDGALNE
EAISVTELDNIYGGYTQKVQQGLKTQEEILGNVQTSHQEFSTLKQSNSEANDREEVMKKL
ASAHDSYVEISNNLREGTKFYNEFTEILLKFQNKCSDLVFARKTERDELLKDLQQSIARE
PSAPSFTAPAYQSNLNTPTPAGPVGPTPTPRTVFNQQPQTKPQPPARPPPPNFTPQAASS
APTNPMSSAPPQTGPTAPGAPPAAPSAAPPGAPPGAPSQAQGPPYPSYQGYPGYYQVPMG
YNPYSYGQYNMPYVPYQTPAQPGYPGAPQPQQHPYGYPQQPPQQQPYYPQQ
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtttatttctgtcccgttaaagaagtcgtcggaagtagatatggccaaatcc
ctgtcaaaattcgtcaaagacacctacccagccggtgaagagcagacggaatatgtccgc
gccgctgaagagttgaacaagctgcgcaaaagtgctctggggaggccgctggacaagcac
gagagctcgctcgagatcctgctgagatattatgaccaactctgtgctgtggaacacaaa
ttccctttctctgaaaaccaggtgtgtttaactttcacatggaaagatgcttttgataaa
ggatcattgtttggtggatccgtcaagcttgcgctggccagcatcggctatgagaagacg
tgtgttctgttcaatgtgggagccctggccagtcagatcgcctctgagcagaacctggac
agcgatgaggggctgagggcagctgccaagttctaccagctgtcgagcggggtgttcgcc
cacattaaggacacggtcctgtccgcactgaaccgggagcccaccatggacatctcccct
gacaccgtgggcacgctcagccagatcatgctggcccaggcgcaggaggtcttcttcctc
aaagccacctcagacaagatgaaggatgctatcattgcaaagctggccaaccaggctgca
gatttctatggtgacgccttcaaacaatgccagtacaaagagaacctgcccaagtatttt
tatttccatgaagtgctgccggtcctggctgccaagcactgcatcatgcaggccaacgct
gagttccaccagtccatcctggccaagcagcagaagaagtttggagaagagatcgcacgg
ctgcagcatgcaacagagctggtgaagacggtcgcgtctcgctacgatgagtacgtcaac
gtgaaggacctgtccgacaagatctcccgtgccctgaccgccgctaagaaagacaacgac
ttcatctaccacgaccgcgttcccgaggtgaaggacctggaccacatcggcaaggctgcc
ctggtcaaggccaccgcagttcaagttcccatgagccagaagttcaccgatctgtttgag
aagatggttcccctggcagtgcaacaggccatgagcatgtacaaccagcgcaagtcggag
atcgtcaactgcctcattggaacgatgagggagtccaccaacctctgcaacggggtcctg
gcctctctgaacctccctgccgctctggaagacctgtcgggagactccgtgccccagtcc
atcctggaaaagtcccgcgccatcatccagcagggggggctgcagagcatcgagcagctg
atcaaggaccttccggagcttatgcagaggaaccgggacatcctggacgagtctctgaag
atgctggacgaagaagagtcaacggacaacgagctccgggccaaattcaaccagcgctgg
agcagaacgccctctggagacctgtacaagtccctgagaacagagggaggaagttaccgg
aattttctggacaaggcggcgagcgcagaccaggttgtcaaggagcgctacagcacccac
tgcgagatgatagcactgctgtgcaaaccagaggcggagctcaccgctgccatcccctcc
gccaaccccgccaagaccctgcagggcagcgaggtggtgaacgtcctgcgctcccagctg
gcccagctggaggaggtgaagaaggagcgcgagcagctggagaacgacatcaagtcggcc
cagttcgacatgacctccaagttcctgaccgccctggcgcaggacggcgccctcaacgag
gaggccatctccgtcaccgagctggacaacatctacgggggctacacccagaaggtgcag
cagggcctcaagacccaggaggagatcctgggaaacgtccagacgtcccaccaggagttc
tccaccctgaagcagtccaactcggaggctaacgacagagaggaggtgatgaagaagctg
gcctccgcgcatgacagctatgtggagatctccaacaacctgcgcgagggcaccaagttt
tacaacgaattcactgaaatcctgctgaaattccaaaacaagtgcagcgacctcgtgttc
gcacgcaagacggagagagacgagcttctcaaggacctccagcagagcatcgctcgggag
cccagcgcgccctccttcaccgcgcccgcgtaccagtccaacctcaacactcccaccccc
gccgggcccgtggggcccactccaactcccaggactgtgtttaatcagcagccacagacc
aaaccacagccccctgcgagaccacctcctccgaacttcactccacaggcagcaagctcc
gcccccaccaacccgatgagctctgcccccccacagaccggcccaaccgcacccggggcc
ccgcccgcagccccttctgctgccccgcctggtgccccgcctggagccccttcccaggca
cagggaccgccttacccgtcgtaccagggttaccccgggtactaccaggtgcccatgggc
tacaacccgtacagctatgggcagtacaacatgccttacgtgccctaccagaccccagca
cagcccggctaccccggggctccccagccccagcagcacccctacggctacccccagcaa
ccgccccagcagcagccctactacccccaacagtag
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