Anguilla anguilla (European eel): 118234967
Help
Entry
118234967 CDS
T07545
Name
(RefSeq) collagen alpha-6(IV) chain-like isoform X1
KO
K06237
collagen type IV alpha
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04510
Focal adhesion
aang04512
ECM-receptor interaction
aang04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118234967
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118234967
09142 Cell motility
04820 Cytoskeleton in muscle cells
118234967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aang04147
]
118234967
00536 Glycosaminoglycan binding proteins [BR:
aang00536
]
118234967
Exosome [BR:
aang04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118234967
Glycosaminoglycan binding proteins [BR:
aang00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118234967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118234967
NCBI-ProteinID:
XP_035287754
LinkDB
All DBs
Position
9:29782194..29849379
Genome browser
AA seq
1680 aa
AA seq
DB search
MKFGIFVFVVVLAVETTYGQQIPCVGINCVEGCDCNPEKGSRGRPGPVGSIGPAGQEGFI
GPQGPPGPKGERGNAGLSGPAGPKGDKGPMGVPGFPGIAGVPGTPGQEGGRGPPGLDGCD
GFDGISGDPGARSPNGQPGVAGFRGIPGPKGQKGEPVYTGPGYIPRGNPGLPGLDGLIGP
RGFPGSPGQAGQRGPDGRPGASGLPGPPGPTGGSGVGFKGEHGDRGDVGPPGPRGVQAEE
TLLYSPVSLYFKGERGDPGYRGQPGLPGRPGIPGSYGYGSETGETGIPGLPGGRGAPGLD
GTPGPPGVKGLPGDPGYAGRSGYPGPKGSQGDTGPPGPPSYGGYGQGAGAPGPRGDPGIP
GAPGAPGDQGPLGYPGQPGPPGLPSYYSGQVLTGFPGTPGPKGEKGEPGRPAYGSPGVPG
SDGSPGFPGPPGPPGLSSFPGRAVLPAIPGPQGQPGPRGPPGGSGYQGAKGELGDCRCNA
AAGIGVPGSRGPPGVAGTPGFFGRKGERGDTGYQGPAGSPGPSGGPGSQGYLGRKGEKGD
SFASSARGVKGERGNPGPRGPPGQPGRSGRDGVPGIPGAQGVSGDSSYGVAGDRGYPGIP
GGKGQPGLAGEPGIGYAGSVGIRGPPGDPGYTGAPGTPGRTGEPGDILPCQYPGEQGDPG
PPGYPGAPGPKGAPGFPGAVGRPGFNGPKGERGDYGLGGLPGPPGFPGPKGESGGSGQPG
GGGQPGGRGKDGLPGLNGQKGERGEVYGAVDGKPGLPGLNGEPGDKGPSGTPGQPGAPGE
EGRSGYPGAKGERGVDGIPGLPGLVGAPGEGSGVGLPGAVGAAGPKGISGSPGYPGAKGE
RGDPGFPGPSGIKGRRGEPGTPGNHGGLGPPGPPGGSREGIPGGPGRKGERGFPGPRGFP
GLGGPPGYAGAPGSKGAPGTPGRDGIPGGPGGPGAKGDVGSPGFPGLPSVPGRVSTLAKG
DPGDPGFNGPPGYPGPRGDKGYPGSPGRRGLPGLPGSAFTRKGEPGNPGYPGTTASPGYP
GPKGAPGGSGFAGSPGPKGDNGSPGAPGFPGGAGAPGQKGARGDSFGYPGGPGSKGVAGD
PGYSGRPGGVGFPGDAGRPGGPGYGGQKGERGDSGRPGGPGSPGYPGSKGLPGFPGRSGL
SGGPGSPGAPGGSGERGAPGFPGLNGLNGLGGPKGLPGTPGVSGAGRPGSPGPNGLKGER
GGSISGGPGYPGAKGERGLSGGAGHPGLPGATGPRGYSYESDTPGPPGDGGPPGYDGGPG
PQGPPGPQGPAGPGSFPGDPGDQGSPGYPGKAGEPGDAGLPGSPGQPGGAGFKGERGDTG
YTGSPGQAGPPGDPGYGGGRGPKGSRGPPGLRGRPGETRPLVVLPTPHGEQGSPGYPGSP
GEMGPSGPPGGPGRPGAKGERGAAGKLGPNGGAGGPGPLGDHGPPGFSGRPGDQGQPGKP
GPPGPPGFTGRAPSIGYTLVKHSQSTLVPACPQGMVQLWDGYSLLYVEGQEKAHNQDLGL
AGSCLPRFSTMPFLYCNADEVCYFASRNDKSYWLSTTAPIPMMPVADQQIAQYISRCSVC
EAPSPAVAVHSQDLTIPPCPYGWRSLWIGYSFLMHTVAGAEGGGQSLVSPGSCLEDFRAT
PFIECNGARGTCHYFATKHSFWLTTVDAGREFLGVPHSETLKPGQQLSRVSRCQVCMKNI
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcggaattttcgtgttcgttgttgtcttggcagttgaaactacgtatgggcag
cagataccatgtgtgggaattaactgcgttgagggctgcgactgtaaccctgagaagggc
agcaggggtcggccagggcctgtggggtcaattgggccagctggacaggaagggtttata
ggaccccagggccccccaggtcccaaaggtgaaaggggcaacgctggactgagcggacca
gctgggccaaaaggggacaagggccctatgggcgtgcccggattcccagggattgctggt
gttccgggcacgccaggccaggagggtggcaggggtccacccgggctggatggctgcgac
ggatttgacggcatttctggcgacccgggcgccaggtctccaaacggacagccgggcgtc
gcaggtttccggggaatacctggacccaaaggtcagaagggcgagcctgtgtacactgga
ccgggctacatccccaggggaaatcctggtctgcctggattggacggtctgattggtccc
agagggttccctggaagcccgggtcaggctggtcagagagggcctgatggaaggcctggt
gcctctggtcttcccggtcctcccggtccaacagggggttccggtgtaggtttcaaagga
gaacatggagacaggggggatgtgggtccacccgggcccaggggggtgcaggctgaagag
actcttttgtactcacctgttagcttatacttcaaaggagaaaggggtgacccgggctat
aggggccaaccaggtctgccaggaaggcccggtattccgggtagctacggttacgggagt
gaaacgggcgagactgggattcctggacttccaggcgggcggggtgcccctggtttagat
ggaaccccgggacctcccggtgtaaaggggttacctggtgatcctggatacgctggaaga
tcaggataccctgggccaaaggggagtcaaggagacacaggcccccctgggccccccagc
tatggcgggtatggtcagggagcaggtgcaccaggtcctcgtggagacccaggaattcct
ggtgctcctggtgcacctggtgaccagggaccattggggtacccagggcagcctggaccc
ccagggctcccctcttactactcaggtcaagttcttacaggcttcccaggcaccccgggg
ccaaaaggggagaagggggagccaggtcgcccagcttatggcagtcctggtgttccaggc
agcgatggctctccagggttccctggtcctcctggtcccccagggctatcatctttccct
gggcgtgctgtactgcctgctatacctggtcctcagggccagcccggtcccagagggcca
ccagggggctcaggataccaaggggcaaaaggtgaactgggagactgccgctgtaacgca
gcagcggggattggggtgcccgggtctcggggccctcccggggtcgcggggacacccgga
ttcttcggcaggaagggtgagagaggagacacggggtaccagggaccagctggctcccct
ggtccaagcggaggcccgggctctcagggctatttgggacgaaagggggagaagggagac
tcttttgcctcttcagccaggggtgtgaaaggggaacggggcaaccccggaccacggggg
cctccggggcaaccaggacgatctggtagagacggagtccccggaatcccaggagcacag
ggagtctctggtgacagtagttatggggtggcaggggacagagggtaccctggaatccct
ggtggaaaagggcagccggggttggctggtgagcctggcattgggtatgcaggcagtgtg
ggcatccgtggaccgcctggagatcccggttacactggcgcccctggaactcctggacgc
actggagagccaggagatattctgccgtgtcagtacccaggagagcaaggtgatccagga
ccccctggctaccccggggctccaggaccaaaaggggcacctggtttccctggagctgta
gggagacctgggttcaatggcccgaagggcgaaagaggagactatggccttggaggatta
cctggaccaccaggcttcccgggccctaaaggggagtcaggaggttcagggcagcctggt
gggggtggccagcctgggggccgagggaaagacggcctgccagggctgaacgggcagaag
ggggaacggggcgaggtttacggagctgtggatgggaaaccaggccttccgggtctaaac
ggagaaccaggagacaaggggccatccggaacaccaggccagccaggcgcaccaggcgag
gaaggccgttcaggctacccgggggcaaagggagagcgtggtgtggatgggatcccagga
ctcccaggcctggttggcgcacctggagagggcagcggggtgggattacctggggcagtt
ggagccgccggacccaagggcatttctggatctccaggataccccggagccaagggggag
cggggtgaccccggttttccagggccctccggtatcaaaggcagacggggagagccgggg
acccctggaaaccacggaggactgggtccccctggaccgccgggtgggtcaagagaaggc
atccctggtggacctggaagaaagggtgaacgaggctttcctggaccaaggggattccca
ggattgggaggacctcccggatatgctggtgctccagggtcaaagggtgctccgggcacc
cctggaagggatggcattccaggcggtcccggagggccgggagctaaaggggatgttggg
agtccgggttttcctggtttgccgtctgtaccgggcagagtcagtactctggcaaagggt
gaccccggtgaccctggcttcaacgggcctcccggataccctgggcctcgaggtgataag
gggtatcctggcagccctggtcgtcgggggttaccaggtctgcctgggtcagctttcaca
aggaagggggaacccggaaaccctggctaccccggcaccactgcatctcccggctaccct
ggacccaaaggggcccctggtggctctggctttgctggctctccaggaccaaagggtgac
aacggaagtcctggagcacctgggttcccaggaggggcaggggcgcctggtcaaaaaggt
gcgcgtggggactcctttggttatcctggaggtcctggcagtaaaggtgttgctggtgac
cctggatactcaggcagaccagggggtgtggggttcccaggagatgctggcagacccgga
ggcccggggtacggcggtcaaaagggcgagcggggcgactcagggaggccggggggtccc
ggctcccccgggtaccctggcagtaagggtctcccagggtttccaggacggtctgggctg
tctggtggtcctgggtcccccggagctccaggtggctccggagaaagaggagcgcctggc
ttcccgggtctcaacgggttgaatggacttggagggccaaaggggctgccaggaacccca
ggtgtgtctggggcaggtaggcctggctccccaggacccaatgggctgaagggagagaga
ggaggctcaatttcaggaggtcctggttaccctggtgcaaagggagagagaggactctca
ggtggagcaggtcatccggggctgcctggtgccactggtccaagggggtactcctacgaa
tcggacaccccaggcccccctggagatgggggtccgccagggtatgacggagggccaggt
cctcagggccccccaggccctcaaggacctgcaggcccgggcagttttccgggggacccg
ggagatcagggatcccctgggtacccagggaaggcaggtgaaccaggtgacgctgggctg
ccaggatcccctggacagccaggtggtgcaggattcaaaggagagagaggagacactgga
tacactggttctccaggacaagctgggccacctggggaccctggatacgggggaggcagg
ggcccaaagggttcacgggggccccctggcctgaggggacggccaggcgagacacgtccc
ctcgtggtattacccacgcctcacggagagcagggttctcctggttatcctggtagccct
ggtgagatgggaccctcgggaccgcctggagggccaggtcgaccaggtgcgaaaggcgaa
aggggagccgcaggtaaacttggacccaatgggggggcaggtggcccaggacctcttgga
gaccacggacctcctggcttctctggacgaccaggagatcagggccagcccggtaaacca
gggccccctggtcccccagggttcactggtagggctccgagcatcggctacaccctggtg
aagcacagccagtccaccctggtgcccgcctgcccccaggggatggtccagctgtgggat
gggtacagtctgctgtacgtggaggggcaagagaaggcccacaaccaggacctgggcctt
gcgggctcctgcctgccccgcttcagcacgatgcccttcctgtactgcaacgccgatgag
gtctgctacttcgccagtcgcaacgacaaatcctattggctatctacgacggctcccatt
cccatgatgccggtggcggatcagcagatcgcgcagtacatcagccgctgctcagtgtgc
gaggcgccctccccggccgtggccgtccacagccaggacctcaccatcccaccctgccca
tacggctggaggagcctgtggattggctactccttcctcatgcacacggtggccggagcg
gaaggcggcggccaatccctggtctccccgggatcatgcctggaggacttccgcgccacg
cccttcatcgagtgcaacggtgcccgcggcacctgccactactttgccaccaagcacagc
ttctggctgacgaccgtggacgcgggccgggaatttctgggcgtcccgcactccgagaca
ctgaaaccgggccagcagctgtcccgggttagccgctgccaagtgtgcatgaagaacata
tag
DBGET
integrated database retrieval system
