Anguilla anguilla (European eel): 118235416
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Entry
118235416 CDS
T07545
Symbol
shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
aang
Anguilla anguilla (European eel)
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aang04121
]
118235416 (shprh)
Enzymes [BR:
aang01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118235416 (shprh)
Ubiquitin system [BR:
aang04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118235416 (shprh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4
PHD
zf-C3HC4_2
TPR_10
zf-RING_2
PHD_5
TPR_12
zf-C3HC4_3
TPR_2
Motif
Other DBs
NCBI-GeneID:
118235416
NCBI-ProteinID:
XP_035288580
LinkDB
All DBs
Position
1:complement(31142954..31183103)
Genome browser
AA seq
1678 aa
AA seq
DB search
MSSRRKRAPPVRVDEETKKRLNWNMHEDRRNEDVVILDNDERTWPPGPPPAPPTTAREEA
AEACCSTSVRPAELSEEPPCTSSDAAATLSLTVLPASDLDLVWKALIGEFSLHPRQFPLD
VGSRRFSLQRSSDRLCVSFLKESQAGNPEETGPGDEHYFPVECSLGGGVLEDLEWLQRRR
VIQLCHNQGDVYIKVGIYILEACLGRPEFLSEGNGRIRKANHLLQKLMELFYDFIIPEVV
ENEEEECDTDLERQNVEELYDYVRHLHQGEGQDLIRDVQHEALIPVLRLYQCQAVNWMLK
RERYKDEVPQEKSLHFLWREVVTLCEKKLYYNPYTGCLIREFPLAGVDWPGGILADEMGL
GKTVEVLALILFNTRQGLDQGGLTLPAGQSVNYFVPPPLRERERRDYFKQEIRPKEKVSY
PAVRVMLLAAIKEMRVGKGASVNAIFTYIRTTYNYDLLKNRTHIKKTLAKLIKEEMVDQV
KGRGLAGSFKLGKKYKDKNKRMSAAKPKSSNADGGHRRRTRRSSGPGKESAADSETTGGR
SIEPEPDAVHSSAPPGSSVGESDYCSKDMRLQEEQGGDEAHIHAQDCQHASDLAVGTQDP
AVRANNGLCPTSVRESEPEVKCPPEEILGSPPCLEEGVPSVRTSMVLPFNTPDYRFECIC
GELGLVDYKARVQCLNCLLWQHAECVGYKEESLGTTPFYCPHCLVAMKPVPTGATLIISP
SSICHQWVEEINRHVRCSSLRVLVYQGVKKHGFIQPHVLAKQDVVITTYDVLRSELNYVD
IPHSNSEDGRRFRNQKRYMAVPSPLVAVEWWRVCLDEAQMVECTTAKAAEMALRLTSINR
WCVSGTPVQRGLEDLYGLVLFLGLDPYWVKYWWDQLLYRPYRRGNTEPLYHLIGQLLWRS
AKKDVIDQIQIPPQTEEVHWLNFSPVEGHFYHRQHEVCSQDALVKLRKISDWSLKLGSLD
RRTVNTILYPLLRLRQACCHPQAVRGEFLPFQKSTMTMEELLKSLQKKCRVECEEAHRQL
VCALNGLAGIHIIRGEFVEAVELYREVLRSSEEHKGRLKTDSLQRLHATHNLMELLNAKH
PGIPPTLRDDRLKEEAEQLRQHYMTKSNSEVSEAREALQPVLQNIRELKRKVQQRSPWWL
DVIQRAIQCSIDDDLVLRIQNELTCSYKQEAKKISMADKFRDGRGLQFLLSSQMDDLMKS
QKTVQDAVKKLEGPPSKKVIEEATICHLRPVRLPLNNCVFCKADELFTDYESKLFSHTVK
GQTAIFEEMIEDEEGLVDDRLPTTSRGLWAASETERALKAILSFAKARRMDPALGEEGNT
FMELFETWKKEYKLLHEYWMVLRDHVSAIDELGMATERLRVRHPDEPKPKVLHIIEPHEV
EQNRVKLLNDRALAKSQLQKKLGQFLYLTNLEKSQDKSTGGLNPEPCPICARPLGQQWAV
LTCGHCFCNQCIAIIVEQYSVGTRRRAIKCAICRQTTSHTEISYVFTTHMASQGQEIPVK
GSHSTKVEAVVRALKKIQMTDPGAKSLVFSTWQGVLDIIAQALFDNNMEFSQINGIHKFQ
ENLSSFKYQENINILLLPLHTGSNGLNIIEATHVLLVEPILNPAHELQAIGRVHRIGQTR
PTFVHRFLIKSTIEERMQAMLKTAEKSHGTTTMKHSEASVLTVADLADLFTEDTEALE
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaggaggaagcgtgctcctcccgtgagggtggatgaggagacaaagaagagg
ttgaactggaacatgcacgaagatcggaggaacgaagacgtagtcatcctggacaatgac
gagcggacttggcccccgggtcccccaccagcaccccctaccacagcccgggaggaggct
gctgaagcctgctgctccacttcggtccggcccgcggaattgagtgaagagcccccgtgc
acgtcctcggatgccgccgcgaccctctctctcacagtgcttcctgcttcagacctggac
ctggtctggaaagctctgattggagagttcagcctgcatcccagacagttccccttggat
gttgggagtagaaggttctccctgcagaggagcagcgatcggctctgtgtaagcttcctc
aaagagagccaggcagggaacccggaggagacggggcctggcgatgagcactacttccct
gttgagtgttctctgggtgggggagttctggaggacctggagtggctgcagaggaggaga
gtaattcagctctgccataatcaaggagatgtatacatcaaggtggggatttacatcctg
gaggcttgcttgggacggcccgaattcctgagcgaaggaaatggacggatcaggaaagcc
aatcatcttctgcagaaactgatggagctcttttatgacttcatcatccctgaggtcgtc
gagaatgaagaagaggagtgtgacacggatctggagcggcagaacgtggaggagctatac
gactacgtcagacacctccaccagggagagggccaggatctgatccgtgatgtccagcac
gaggccctcatacccgtcctcaggctctaccagtgccaggccgtcaactggatgctgaag
agagagaggtacaaggacgaagtccctcaagagaaatcactgcatttcctttggagagag
gtggtcacactgtgtgaaaagaagctgtactacaacccatatacaggctgtctgatcaga
gagttccccctggcaggggtggactggccaggtgggatcttggcggatgagatgggcctg
ggcaagacagtggaggttctggctctgatcctgttcaatacgcgccagggcctggaccag
ggcggcctcacacttcctgcgggacagtcggttaactattttgtcccccctccactgaga
gaaagagagagaagagattatttcaagcaggagataagaccaaaagagaaggtgtcctat
cctgctgtacgtgtgatgcttctcgctgctataaaggagatgagggtcgggaagggtgcc
tctgtgaatgccattttcacctacatccgcaccacgtacaactacgacctgctgaagaac
cgcacccacatcaagaagaccttggccaagctcatcaaggaggagatggtggaccaggtc
aaaggccgtgggctggcagggtcattcaagctcgggaagaaatacaaagataaaaataaa
aggatgagcgctgcgaaacctaagtcttccaacgcagatggcgggcacagacggagaacc
cgcaggagctcggggccggggaaagagtctgcggcggactctgagaccacaggggggcgc
tctattgaacctgaaccggatgccgtccacagctccgccccgcctggctcctctgtggga
gagagtgactactgctcaaaagacatgcgcttgcaggaagagcaaggtggggatgaagca
cacatccatgctcaggactgccagcacgccagtgatctagcagttgggacacaggaccca
gccgtcagagccaacaatggtctgtgtcccacctctgtgagggaaagtgaacccgaggta
aagtgtcccccagaggagattttggggagccccccatgcctcgaagagggtgtgccttct
gtacgaacctctatggtcctcccctttaacactccggactaccgctttgagtgtatctgt
ggggagctgggcctagtggactacaaggcacgcgtgcagtgcctgaactgcctgctttgg
cagcacgccgagtgcgtcggctacaaggaggagagcttgggcaccacgcccttctactgc
ccccactgcctggtagctatgaagcccgtgcccacgggcgccaccctgatcatctctcca
agctccatctgccaccaatgggtggaggagatcaaccgccatgttcgctgttcctccctg
cgagtcctggtgtaccaaggcgtgaagaaacacgggttcatccagccccatgtcctggcc
aagcaggacgtagtcatcaccacctacgatgtgctccgctccgaacttaactacgtggac
attccgcacagcaacagcgaggatggtcgccgcttccgtaaccagaagcgctacatggcc
gtgcccagccctctggtggctgtggagtggtggcgcgtttgtctggatgaggcacagatg
gtggagtgcaccaccgccaaggctgcagaaatggcattgcgcctcacctccatcaaccgc
tggtgtgttagtggtactccagtgcagagaggcctggaagatctatatgggcttgttttg
ttcctggggctggacccatactgggtgaagtactggtgggaccagctgctgtaccggcca
tatcgcagaggaaacactgagcctctgtaccacctgattggccagctcctgtggcggtct
gctaaaaaagacgtcattgatcagattcaaattcctccgcaaaccgaggaggtccactgg
ctaaacttctcaccggtcgagggccacttctaccatcggcagcacgaggtctgctcccag
gatgccctggtgaagctgaggaagatctctgactggtccctgaagctgggcagtctggac
cgccgcacggtcaacaccatcctgtacccgctgctgcggctgcgccaggcctgctgccac
ccgcaggcagtgaggggcgagttcctgcccttccagaagagcaccatgacaatggaggag
ctgctgaagtctctgcagaagaagtgcagagttgagtgtgaggaggcacaccgacagctg
gtgtgtgctctcaacggtctggcgggaatccacatcatcagaggtgaatttgtggaggca
gtggagctctacagagaggtgctacgctcttctgaggagcacaaaggcagactaaaaacc
gactccctccagaggctacacgccacacacaatttgatggagctgctgaatgcgaagcac
cctgggatacctcccactcttagagatgatcgcctgaaagaggaggccgagcagctgagg
cagcactacatgaccaagtccaactctgaagtgtcagaagcaagagaagccctacagcct
gttctgcagaacatcagagagctcaaacgcaaggtgcaacagcgctccccctggtggttg
gatgtcatacagcgagcaatccagtgttccattgatgatgacctcgtccttcgcatccag
aatgagctgacttgcagttacaagcaggaagccaagaagatctccatggcagacaagttc
cgtgatgggcggggtctgcagtttcttcttagctcacagatggatgacctgatgaagtcc
cagaaaaccgtacaggatgccgtgaagaagctggagggcccgccctcaaagaaggtgatc
gaggaggccactatctgtcacctgaggcctgttcgtctgccgctaaacaactgtgtgttc
tgcaaagccgatgagctgttcactgactacgagtccaagctgttttcccacactgtgaag
gggcagactgccatcttcgaagaaatgatcgaggacgaggagggcttggtggacgaccgg
ttgcctacaacaagccgtggcctgtgggccgccagtgagacggagcgtgcgctgaaggcc
atcctatccttcgccaaggcacggcgcatggacccagccctgggggaagagggcaacacc
ttcatggagcttttcgagacctggaagaaagagtacaagctgctgcatgagtactggatg
gtgctgagagaccacgtgtcagcgatcgatgagctgggcatggccacagagcgattgcgt
gtccgccacccagatgagcccaagccaaaggttctgcacatcattgagccacatgaggtg
gagcagaatagggtgaagttgttgaatgaccgagccttggcaaaatcgcagctacagaag
aaattagggcagtttctatacctcacaaaccttgagaagtcccaggacaaatccaccggg
ggcttgaaccctgagccatgtcccatctgtgcacgccctcttggacaacagtgggcggtc
ctaacgtgtggacactgcttctgcaaccaatgcatcgctatcatcgtggagcaatacagc
gtgggcactcgccgccgcgccatcaagtgcgccatctgcaggcagaccacctcccacact
gagatctcctatgtgttcaccacccacatggccagccagggacaggagatcccagtcaag
ggaagccactcgaccaaggtagaggcagtggtgagagctctgaagaagatccagatgaca
gacccaggggccaagtcactggtcttctcaacgtggcaaggagttctggacatcattgct
caagcgctgtttgacaacaacatggagttttcccaaatcaatgggatccacaagttccag
gaaaacctctcttcctttaagtatcaggaaaatatcaacatcctgctgctcccattgcac
acggggtcaaacggtctcaacatcatcgaggccacgcatgtcctcctggtggagcctatc
ctcaaccccgcccatgagctgcaggccatcggcagggtccaccgtatcggccaaaccagg
cccacttttgttcacaggtttctcattaagtccacaatagaggagcgaatgcaggccatg
ctgaaaacagcagaaaaaagtcatggcaccaccacaatgaagcactcggaggcctcggtg
ctgacggtggctgacctggcagatctcttcaccgaggacaccgaggcacttgagtga
DBGET
integrated database retrieval system
