Anguilla anguilla (European eel): 118235921
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Entry
118235921 CDS
T07545
Symbol
lig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
118235921 (lig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aang03400
]
118235921 (lig3)
Enzymes [BR:
aang01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
118235921 (lig3)
DNA repair and recombination proteins [BR:
aang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
118235921 (lig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
118235921
NCBI-ProteinID:
XP_035289703
LinkDB
All DBs
Position
9:complement(35914664..35933558)
Genome browser
AA seq
1013 aa
AA seq
DB search
MLRLSICRALRTLYIAPLRKQCRNKPYWQTPEPFHFYLCTRFLRHHFVGVLFKPGHSYQY
TQASGPISLSIGQHFRASLTQFSSGWTGMAEQRYCVEYAKRGTAGCKKCKDKIMKGLVRI
GKIVPNPFSESAGEMKEWYHVKCIFEKLERARATTKKIEDITDLEGWEELQDEDKELINK
HVGDLAAKTNASPKKKVQAKLNNSGGITAPLADPSVNAPRKFSGFMATKAGTATSPGPSP
AKASQGSMLSAQMCDPTHKDCLLREFRKLCAMVAEKPSYNVKTQIIQDFLRKGSGGDKFR
GDLYLTVKLLLPGVVKSVYNLNDKQIIKLFSRIFNCSQEEMVRDLEQGDVSETVRIFFEG
SRSFPPAAKSLLTLQEVDASLTRLAQLTKEDDQQKELETISKRCTGNDLKCIIRLVKHDL
KMNSGAKHVLDAVDPNAYDAFKASRNLGDVIDRVLRNQLEASSGSGPRKILSVEASLMTP
VQPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVAH
FKEFIPQAFAGGQSMILDAEVLLIDTNTSKPLPFGSLGVHKKAAFQDAKVCLFVFDCIYF
NGVSLMDKPLYERRKFLQDNMVEVPNRILFSEMKHVTRAADLAEMITRVIREGLEGLVLK
DIKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGKGSNGGIMSSFLMGCYDPDS
KKWCTVTKCSGGYDDATLARLQDELDVIKISKDPRKIPSWLNIIKNYYPDFIIRDPEKAP
VWEITGAEFSKSEMHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYRVSKERCDFEI
TAGSSKSNNDNSSSGGDSGGNSPSTSQTAAMPSKAGSSGAPKAKAVKNVPSPGPAAKRKN
PPEEHSAKKVKRTETVHSNGQSKPKTSQSTESKNEKTLLDIFSGVKLFLPESVQDYQKLR
RYFVAYDGDLVPEYDAASATHTLSEPEEDSQAQRVTANWIWECIRKRRVVPSC
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcttaggcttagcatttgcagggcattacgaacattgtacattgccccactgagaaag
caatgcaggaataaaccttactggcaaactcctgaaccttttcacttctacctgtgcaca
cggtttttgcgtcatcactttgtgggcgtacttttcaaacctgggcacagttatcagtac
acgcaggcatctggacccatcagcctctccattggacagcatttccgtgcctccttgacc
cagttcagcagtggttggacaggtatggcggagcagaggtactgtgtggagtatgccaag
cgcggcacggctggctgcaagaagtgcaaagacaagatcatgaaagggctggtgcgcata
ggtaagatcgtgcccaacccctttagtgagtctgcgggtgagatgaaagagtggtaccat
gtgaaatgcatcttcgagaaacttgagcgggcacgggccacaacgaagaagattgaagac
atcactgacctggaaggctgggaggaactgcaagatgaggacaaagagctaatcaacaaa
catgtgggagatctggctgcgaagacaaatgccagcccaaagaagaaggttcaagcgaag
ctgaacaacagcggcggaataacggcgccccttgctgatccatctgttaatgcccccagg
aagttctctggcttcatggctaccaaagcagggactgccaccagcccaggcccttctcct
gccaaagccagtcaagggagcatgttgtcagctcagatgtgtgaccccacgcacaaggac
tgcttgctcagggagttccgtaagctatgtgccatggtggcagaaaagcccagctacaac
gtaaagacacagatcatccaggacttcctgaggaaaggctctggtggggataagttcagg
ggagacctgtaccttaccgtgaagctgcttctcccaggagtggtcaagagcgtgtacaac
ctgaatgacaagcaaataatcaagctgttcagtcgtatcttcaactgcagccaggaggag
atggtgcgagacttggagcagggagacgtctctgaaacagtgcggatattttttgagggg
agcaggtcgtttccgccagcagcaaaaagtctcctgaccctccaggaagttgatgcttcc
ttgactcgtctggcccagctcaccaaagaagatgatcagcagaaagagctggagaccata
tctaaacgatgcacaggaaatgacctcaaatgtatcataagacttgtgaaacacgacctg
aagatgaactccggagctaagcatgtcctggatgctgtggacccaaatgcctacgatgca
ttcaaggcctctcgtaacctgggagatgttattgatagggtgctgcgaaaccaactggag
gcatccagtggctcagggcccaggaagatcctgagcgtggaggcctccctcatgacacct
gtgcagccaatgctggcggaggcgtgtaaatccatcgaatatgccatgaaaaagtgtccc
aatggaatgtactctgagatcaagtacgatggggagcgtgtgcaggtccacaagaatgga
gatcacttcagctacttcagtcgcagtctcaagcctgtgcttccacacaaggtggcccat
ttcaaagagttcatcccacaggcgttcgcagggggtcaaagcatgatcttagatgcagag
gtgcttctaattgacaccaacaccagcaagcccctcccgttcgggtccctgggtgtccac
aagaaagcagctttccaagacgccaaagtgtgcctgtttgtgtttgactgtatatatttc
aacggtgtgagcctgatggacaagcccctgtatgagcgaaggaagtttctccaagataac
atggtggaggttccaaacagaatcctgttctccgagatgaagcatgtcactagagctgca
gacctggctgagatgatcactcgagttattcgagaggggctagagggactggttttgaag
gatatcaagggcacatatgagcctggaaagcgccactggttgaaggtgaagaaagactat
ctgaacgaaggggccatggcagacaccgctgacctggtggttctgggggctttctacggc
aaaggctcaaacgggggcataatgtccagttttttgatgggctgctatgaccctgactct
aagaaatggtgcacagtgaccaaatgctctgggggctatgacgacgccactctggccaga
cttcaggatgagctggatgtgatcaagataagcaaggatccacgcaaaatcccaagctgg
ttgaacataatcaagaactactatccagatttcattatccgagatccagaaaaagcccca
gtgtgggagatcacaggggcggagttctctaaatccgaaatgcacacagccgatggcatc
tccatccgcttccctcgctgcaccagaatccgtgacgacaaggactggaaaagtgccact
aacctgccccagctcaaagaactgtacagagtttcaaaggaaaggtgtgatttcgagatc
acagcaggatcttcaaagagcaacaatgacaacagttcctctggcggagatagtggcggg
aactctccctctacttcccaaacagcagccatgcccagtaaggccggaagcagtggtgct
cccaaagcaaaggcagtgaaaaatgtcccctcccccggccctgcagccaagaggaaaaat
cctccggaggaacacagtgcaaagaaggtgaaaaggacagaaactgtacacagcaatggg
caaagcaaaccgaagacttcccaatcaacagaaagcaaaaatgaaaagaccttactggac
atcttcagtggggtgaagcttttcctgccggagtcagtacaggactatcaaaaactgcgc
cggtactttgtggcctatgacggcgacctggtgccagagtacgatgctgcctcagcaacc
cacacgctgtcggagcctgaggaagacagccaagcacagagagtcaccgccaactggatc
tgggagtgcatccggaaacgaagagtggtcccatcctgttga
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