Anguilla anguilla (European eel): 118236033
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Entry
118236033 CDS
T07545
Symbol
rpa1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang03030
DNA replication
aang03420
Nucleotide excision repair
aang03430
Mismatch repair
aang03440
Homologous recombination
aang03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118236033 (rpa1)
03420 Nucleotide excision repair
118236033 (rpa1)
03430 Mismatch repair
118236033 (rpa1)
03440 Homologous recombination
118236033 (rpa1)
03460 Fanconi anemia pathway
118236033 (rpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aang03000
]
118236033 (rpa1)
03032 DNA replication proteins [BR:
aang03032
]
118236033 (rpa1)
03400 DNA repair and recombination proteins [BR:
aang03400
]
118236033 (rpa1)
Transcription factors [BR:
aang03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
118236033 (rpa1)
DNA replication proteins [BR:
aang03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
118236033 (rpa1)
DNA repair and recombination proteins [BR:
aang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
118236033 (rpa1)
MMR (mismatch excision repair)
118236033 (rpa1)
DSBR (double strand breaks repair)
HR (homologous recombination)
118236033 (rpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
RADX
A_deaminase
Motif
Other DBs
NCBI-GeneID:
118236033
NCBI-ProteinID:
XP_035289922
LinkDB
All DBs
Position
9:26313203..26362804
Genome browser
AA seq
605 aa
AA seq
DB search
MSVKLTEGAIEAFTKGSVVPNPMLQVVNIRKIDGGTGPARYRLMMSDGLYTMSSFMLSTQ
LNSLAEQDVMAPNCICLVKKNVTNTLKDGRRVVIILDMEVVKSAEEVGGKIGEPTPYVEG
QTKTTAPPAPAAPAAQPLQPRNVPTSPGNRGSGRDFGKKALSNVPNTPGGSSKVVPIASL
NPYQSKWTIRARVTNKGGIRTWSNSRGDGKLFSMEIVDDSGEIRVTAFNQEVDKFFTLIE
TGKVYYISKGTLKIANKQYSSVKNDYEMTMNGETTFIPCDDCQDVPMVQCDFVSIADLET
REKDAILDVIGVCKSVEEVSRITTKNNREVSKRAISLVDASGKMVAVTLWGDEAEKFDGS
GQPILAIKGARLSDFGGRSLSALFSSTVMINPDIPEAYKLRGWYDKEGHALEAQSMTELK
GGGGGGGNTNWKMLSDVKTEHLGHGEKADYFSCVANIVYLRKENCLYQACPTQDCNKKVV
DQHNGMFRCEKCDREFPNFKYRLILSANIADCGDNQWVTCFQESAEAILGHDADYLGKLK
ESSETSFEEVFQQANFKMYNFRIRVKLETYNDESRIKGTVMDVQPVDHLEYSKRLIANIR
KLEAQ
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgaagcttacagaaggagccattgaggctttcacaaaagggtcagtggtaccc
aatccaatgctgcaagtggtgaacatccgtaaaattgacgggggcaccgggcccgccagg
tatcggctgatgatgagcgacgggctgtacaccatgtcctccttcatgctgtccacgcag
ttgaactccttggctgaacaggacgttatggcccccaactgcatctgcttggtgaagaag
aacgtgaccaacactctgaaggacgggagacgggtggtgatcattttggacatggaggtt
gtgaagtcggcggaggaagtgggcgggaagattggtgagcccaccccttatgtggaaggc
cagacgaagaccacagcgccccctgcccccgccgcccccgccgcccaacccctgcagccc
cgcaacgtgcccacgtcccctggcaacagaggttccggcagggattttgggaagaaagcc
ttgtcaaacgtccccaacacaccaggaggatcctcaaaggttgtccccattgccagtctg
aacccctatcagtcaaagtggaccatccgtgcccgcgtcaccaacaagggcggcattcgc
acctggagcaactcccgcggcgacggcaagctgttctccatggagatcgtggacgacagc
ggtgagatcagagtgactgcttttaaccaggaagtggacaaattcttcaccctcatcgag
acgggcaaggtgtactacatctccaaaggcacccttaagatcgccaacaagcagtactcg
tccgtcaaaaacgactacgagatgaccatgaacggcgagaccaccttcatcccctgcgac
gactgccaggacgttcccatggtgcagtgcgacttcgtctccatcgccgacctcgagacc
cgcgagaaggacgccatcctcgacgtgatcggcgtgtgcaagagcgtggaggaggtctcc
cggatcaccaccaagaacaaccgcgaggtctccaagagggccatcagcctcgtggacgcc
tccggcaagatggtggcggtcacgctgtggggagacgaggcggagaagtttgacgggtcg
gggcagccgatcctggccattaaaggggcgcggctgtcggacttcggggggcggtccctc
tctgctctcttcagcagcaccgtgatgatcaacccagacatccctgaggcctacaagctg
cgaggctggtacgataaggagggccacgccctggaagcccagtcgatgacggagctgaag
ggcggcggaggaggcggagggaacaccaactggaaaatgctcagcgacgtcaagactgag
cacctggggcacggagagaaggccgattacttcagctgcgtagccaacatcgtgtacctg
cgcaaggagaactgcctgtaccaggcctgccccacgcaggactgcaacaagaaggtggtg
gaccagcacaacggcatgttccgctgcgagaagtgcgaccgcgagttccccaacttcaaa
taccgcctcatcctgtctgccaacatcgctgactgcggggataaccagtgggtgacctgc
ttccaggagagcgcagaggccatcctgggacacgacgcagattacctgggcaagctgaag
gagtcgagtgaaacctccttcgaagaagtcttccagcaagccaacttcaagatgtacaac
ttccgcatccgagtgaagctggaaacctacaacgacgagtcccggatcaaaggcacggtg
atggacgtccagcccgtggaccacctcgagtacagcaagcgcctcatcgccaacataagg
aagctggaggcgcagtag
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