Anguilla anguilla (European eel): 118236136
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Entry
118236136 CDS
T07545
Symbol
rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
aang
Anguilla anguilla (European eel)
Pathway
aang04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
aang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
118236136 (rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aang04131
]
118236136 (rabgef1)
Membrane trafficking [BR:
aang04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
118236136 (rabgef1)
Protein recycling
Other Rab GTPase associated proteins
118236136 (rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Rep_N
Sulfotransfer_3
PIN_8
Motif
Other DBs
NCBI-GeneID:
118236136
NCBI-ProteinID:
XP_035290121
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All DBs
Position
9:complement(44994157..45009971)
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AA seq
494 aa
AA seq
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MSQKSERRGIHVDQSELLCKKGCGYYGNAAWQGLCSKCWREEYQRARQKQIQEDWALAEK
LQREEEAAYASSQGAQSQPSLTPFSKFEEKKTNEKTRKVTTVKKFFSPSSRTAPKKESHE
GKTPSPSITRQSSIETDRVSRDFVDFLKNLQKPGREIHKQSRAFIENMANKKDLGADELS
ECVQDFYQNMSDRLMTHFKGSTERVERVMDQVEKYIMTRLYKNVFCPETTDDEKKDLATQ
HRIRALHWVTIQMLCVPVDEEIPEVSDNVVKAITDVIEMDSKRVPRDKLACITRCSKHIF
TAIKITKNEPASADDFLPTLIYIVLKANPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSAEDFERYMSGQASPRKQEAEAWPQPGPAGGRSPGLSQAYRSL
DQLTGLGARHDRVLEGARGLQSDLIGWQESVEREVREILEKYPLEIRPPASAIDSDNVEN
DRLPPPLQPQVFAG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaagtcggagcgcagggggatccacgtggaccagtcggagctcctgtgcaag
aaaggatgcggttactacggcaacgcggcctggcagggcctgtgctcaaagtgctggagg
gaggagtaccagcgcgcccggcagaaacagatccaggaggactgggccctggctgagaag
ttgcagagggaggaggaagcggcctatgccagcagccagggggcgcagtcccagccctct
ctcactcccttctccaaattcgaggagaagaagaccaacgagaagacccgcaaagtcacc
accgtgaagaagttcttcagcccgtcctcgcgcaccgcacccaagaaagagtcccacgag
gggaagacccccagcccctccatcacccggcagtccagcatcgagacggaccgggtctcc
cgggacttcgtggacttcctgaagaacctgcagaagccgggccgggagatccacaagcag
agccgggccttcatcgagaacatggccaacaagaaggacctgggtgccgatgaactgtcg
gagtgcgtccaggacttctaccagaacatgtccgaccgcctgatgacccactttaaaggg
tccacggaacgcgtggagcgagtgatggaccaggtcgagaagtacataatgacacgcctg
tacaagaacgtcttctgtcccgaaaccacggacgacgagaagaaagacctggccacgcag
cacaggatcagggctctgcactgggtcactattcagatgctgtgtgtccccgtcgatgag
gagatccctgaggtgtcagacaacgtggtaaaagccatcacagatgtcatcgagatggac
tccaagcgcgttccccgggacaagctggcctgtatcacccgctgcagcaagcacatcttc
accgccatcaagatcaccaagaacgagccggcgtcggccgacgacttcctgcccaccctc
atctacatcgtcctgaaggccaaccctccgcgcctgcagtccaacatccagtacatcacc
cgcttctgcaaccccagccgcctcatgaccggcgaggacggctactacttcaccaacctg
tgctgtgcggtggccttcattgagaagctggacgcccagtccctcaacctgagcgccgag
gacttcgagcgctacatgtcggggcaggcgtcgccccggaaacaggaggcggaggcgtgg
ccccagccgggccctgcaggggggaggagccccgggctgagccaggcgtaccggagcctg
gaccagctgacggggctgggggcgcggcacgaccgggtgctggagggggcgcggggcctg
cagagcgacctgatcggctggcaggagagcgtggagcgggaggtgcgggagatcctggag
aagtacccgctggagatccggccgcccgcctccgccatcgactccgacaacgtggagaac
gaccggctgcccccgccgctccagcctcaggtgttcgctggctga
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